Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 1.1e-116 423.3 221 100.0
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 2.6e-36 156.4 262 41.6
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 1.3e-35 154.1 262 41.2
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 2.4e-34 149.8 265 39.2
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 3.2e-34 149.4 253 41.5
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.3e-32 143.3 253 39.1
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.5e-31 139.8 280 35.4
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 4.4e-28 129.0 121 57.0
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.3e-27 127.5 271 35.8
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.7e-27 127.1 95 64.2
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 2.2e-27 126.7 214 38.3
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 8.3e-27 124.8 93 63.4
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 1.1e-26 124.4 81 70.4
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 1.4e-26 124.0 268 36.2
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 1.9e-26 123.6 93 62.4
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 1.9e-26 123.6 199 37.2
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 1.9e-26 123.6 82 73.2
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 1.9e-26 123.6 81 70.4
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 3.2e-26 122.9 190 39.5
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 3.2e-26 122.9 82 67.1
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 4.1e-26 122.5 81 71.6
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 5.4e-26 122.1 82 67.1
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 5.4e-26 122.1 239 33.5
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 5.4e-26 122.1 82 69.5
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 7.0e-26 121.7 82 68.3
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 9.2e-26 121.3 194 38.7
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 9.2e-26 121.3 83 68.7
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 9.2e-26 121.3 82 67.1
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 1.2e-25 120.9 92 63.0
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 1.6e-25 120.6 213 37.6
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.6e-25 120.6 101 59.4
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.0e-25 120.2 82 68.3
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 2.0e-25 120.2 92 62.0
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 2.0e-25 120.2 101 61.4
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.7e-25 119.8 82 67.1
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 2.7e-25 119.8 200 38.5
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 2.7e-25 119.8 92 59.8
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 3.5e-25 119.4 270 33.0
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 3.5e-25 119.4 85 63.5
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.5e-25 119.4 93 58.1
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 4.6e-25 119.0 86 62.8
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 4.6e-25 119.0 97 60.8
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 4.6e-25 119.0 97 60.8
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 4.6e-25 119.0 95 61.1
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 6.0e-25 118.6 89 64.0
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 6.0e-25 118.6 110 56.4
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.0e-25 118.6 110 56.4
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 6.0e-25 118.6 299 33.1
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 6.0e-25 118.6 82 69.5
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 6.0e-25 118.6 95 60.0
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 7.8e-25 118.2 97 59.8
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 7.8e-25 118.2 96 61.5
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 7.8e-25 118.2 82 68.3
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 7.8e-25 118.2 82 68.3
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 1.0e-24 117.9 245 34.3
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 1.0e-24 117.9 99 58.6
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.0e-24 117.9 77 70.1
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.0e-24 117.9 77 70.1
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 1.3e-24 117.5 257 35.0
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 1.3e-24 117.5 82 68.3
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 1.3e-24 117.5 100 58.0
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 1.7e-24 117.1 82 67.1
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.3e-24 116.7 100 56.0
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 2.3e-24 116.7 93 60.2
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 2.3e-24 116.7 271 31.7
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.3e-24 116.7 82 68.3
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 2.3e-24 116.7 95 55.8
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 2.3e-24 116.7 81 65.4
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 3.9e-24 115.9 82 65.9
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 3.9e-24 115.9 217 35.9
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 5.0e-24 115.5 95 58.9
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 5.0e-24 115.5 82 64.6
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 6.6e-24 115.2 95 58.9
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 6.6e-24 115.2 277 31.4
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 8.6e-24 114.8 260 33.8
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.1e-23 114.4 82 63.4
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.1e-23 114.4 82 63.4
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 1.5e-23 114.0 98 58.2
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 1.9e-23 113.6 82 62.2
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.9e-23 113.6 82 62.2
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 2.5e-23 113.2 82 63.4
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 3.3e-23 112.8 82 64.6
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.3e-23 112.8 103 57.3
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 5.6e-23 112.1 79 65.8
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 5.6e-23 112.1 82 62.2
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 7.3e-23 111.7 82 64.6
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.2e-22 110.9 267 32.2
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 2.8e-22 109.8 266 32.3
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 3.6e-22 109.4 82 63.4
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 4.7e-22 109.0 185 37.8
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 6.2e-22 108.6 97 51.5
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 6.2e-22 108.6 291 32.0
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.8e-21 107.1 251 31.9
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.3e-21 106.7 282 32.3
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 4.0e-21 105.9 230 36.5
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 4.0e-21 105.9 98 56.1
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 8.9e-21 104.8 82 62.2
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 1.2e-20 104.4 81 59.3
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 5.8e-20 102.1 68 73.5
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 9.8e-20 101.3 273 27.8
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 2.5e-15 86.7 186 34.4
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 3.3e-15 86.3 81 44.4
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 3.3e-15 86.3 81 48.1
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.6e-14 84.0 55 74.5
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 2.8e-14 83.2 59 71.2
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 4.7e-14 82.4 81 44.4
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 6.2e-14 82.0 232 31.0
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.4e-13 80.9 51 78.4
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 3.8e-11 72.8 245 30.2
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.6e-09 67.4 69 43.5
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 2.3e-08 63.5 146 31.5
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 1.9e-07 60.5 48 50.0
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.6e-06 57.4 59 57.6
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 6.2e-06 55.5 134 31.3


User provided reference genes

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