Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 3.2e-284 981.1 499 100.0
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 7.9e-118 428.3 479 51.1
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 1.0e-117 427.9 477 49.7
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 4.5e-113 412.5 475 47.6
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 4.5e-113 412.5 475 47.8
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 1.7e-112 410.6 476 49.4
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 2.9e-112 409.8 481 48.2
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 5.0e-112 409.1 478 46.9
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 7.2e-111 405.2 492 47.4
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 1.0e-109 401.4 499 45.9
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 3.0e-109 399.8 494 44.9
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.1e-108 397.9 479 44.9
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 4.4e-108 396.0 475 45.1
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 1.3e-107 394.4 476 47.7
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 1.3e-107 394.4 475 46.3
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 1.7e-107 394.0 484 47.5
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 3.7e-107 392.9 479 44.3
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 3.7e-107 392.9 475 46.1
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 4.8e-107 392.5 488 46.9
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 4.8e-107 392.5 485 43.7
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 6.3e-107 392.1 471 45.0
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 1.4e-106 391.0 486 46.3
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 1.4e-106 391.0 497 44.9
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 4.1e-106 389.4 480 45.6
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 5.3e-106 389.0 479 45.9
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 4.5e-105 386.0 508 44.5
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 4.5e-105 386.0 499 43.9
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 1.3e-104 384.4 497 43.9
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 2.9e-104 383.3 478 44.1
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 3.8e-104 382.9 477 46.8
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 6.5e-104 382.1 482 44.2
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 1.1e-103 381.3 486 43.8
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.9e-103 380.6 479 45.1
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 3.2e-103 379.8 478 44.1
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 2.7e-102 376.7 501 43.3
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.7e-102 376.7 479 43.6
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 4.7e-102 375.9 480 42.7
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 6.1e-102 375.6 474 43.9
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 8.0e-102 375.2 481 43.5
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 1.0e-101 374.8 478 43.9
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 1.0e-101 374.8 478 43.9
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 1.4e-101 374.4 498 44.2
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 5.2e-101 372.5 474 43.9
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 5.2e-101 372.5 469 44.1
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 6.8e-101 372.1 502 42.8
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 2.0e-100 370.5 477 43.8
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 2.8e-99 366.7 465 43.7
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 1.1e-98 364.8 480 43.5
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 1.4e-98 364.4 487 45.6
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 1.4e-98 364.4 484 42.4
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 1.8e-98 364.0 484 42.6
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 9.1e-98 361.7 476 42.9
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 1.2e-97 361.3 478 43.3
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 2.7e-97 360.1 480 42.9
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 7.7e-97 358.6 480 42.7
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.2e-96 357.1 498 42.4
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 2.2e-96 357.1 477 43.0
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 5.0e-96 355.9 474 42.2
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 8.5e-96 355.1 494 42.9
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 1.9e-95 354.0 498 42.6
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 4.2e-95 352.8 483 42.9
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 6.1e-94 349.0 487 41.1
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 6.1e-94 349.0 608 37.8
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 2.0e-92 344.0 481 44.1
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 5.7e-92 342.4 476 40.1
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 7.5e-92 342.0 492 41.5
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 9.8e-92 341.7 489 41.3
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 3.7e-91 339.7 493 40.8
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 3.7e-91 339.7 481 40.7
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 1.1e-90 338.2 474 41.8
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 1.8e-90 337.4 483 39.5
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 5.4e-90 335.9 503 40.0
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 2.5e-87 327.0 415 45.5
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 4.3e-87 326.2 495 41.0
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.8e-86 323.6 480 40.6
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 2.3e-85 320.5 486 39.3
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 2.6e-84 317.0 459 42.7
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 2.9e-83 313.5 465 41.9
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 4.1e-82 309.7 401 44.6
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 6.6e-80 302.4 372 46.8
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 4.7e-78 296.2 414 42.5
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 1.8e-77 294.3 531 35.2
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 2.7e-73 280.4 428 40.0
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 3.5e-73 280.0 315 49.5
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.3e-72 277.3 409 40.6
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 3.0e-72 276.9 477 36.9
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 1.1e-71 275.0 339 45.7
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.1e-69 268.5 344 44.8
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 1.4e-69 268.1 346 43.9
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 5.2e-69 266.2 338 43.5
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 3.4e-68 263.5 334 43.7
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 1.4e-66 258.1 336 43.5
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 4.7e-62 243.0 337 40.9
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 1.2e-57 228.4 456 34.9
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 9.6e-55 218.8 303 40.3
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 2.1e-54 217.6 299 44.5
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 3.0e-48 197.2 232 47.4
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 2.5e-47 194.1 481 28.1
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 1.7e-40 171.4 189 47.6
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 3.3e-39 167.2 241 43.2
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 3.4e-36 157.1 487 26.5
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 2.8e-30 137.5 178 42.1
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.9e-27 127.5 138 51.4
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 7.9e-25 119.4 144 43.8
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 6.7e-24 116.3 144 44.4
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 1.5e-23 115.2 172 39.0
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 2.8e-14 84.3 112 42.0
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 4.8e-06 57.0 103 39.8


User provided reference genes

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