Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024297 Vanilla planifolia HOM05D005422 ORTHO05D006578 2.1e-85 318.9 156 100.0
HPP92_024300 Vanilla planifolia HOM05D005422 ORTHO05D006578 3.0e-79 298.5 150 97.3
Hund25438 Selenicereus undatus HOM05D005422 ORTHO05D006578 2.6e-35 152.5 150 51.3
EL10Ac6g13434 Beta vulgaris HOM05D005422 ORTHO05D006578 2.9e-34 149.1 150 50.7
Sc11g0000670 Simmondsia chinensis HOM05D005422 ORTHO05D006578 2.9e-34 149.1 112 58.9
TAR374G0226 Trochodendron aralioides HOM05D005422 ORTHO05D006578 2.9e-34 149.1 150 50.7
Nn3g16548 Nelumbo nucifera HOM05D005422 ORTHO05D006578 1.1e-33 147.1 153 52.3
Cpa.g.sc43.8 Carica papaya HOM05D005422 ORTHO05D006578 2.7e-32 142.5 150 48.7
AUR62005568 Chenopodium quinoa HOM05D005422 ORTHO05D006578 3.6e-32 142.1 150 48.0
Aqoxy5G03525 Aquilegia oxysepala HOM05D005422 ORTHO05D006578 6.1e-32 141.4 152 50.7
Haze_12366 Corylus avellana HOM05D005422 ORTHO05D006578 6.1e-32 141.4 150 49.3
Cfa009312 Carpinus fangiana HOM05D005422 ORTHO05D006578 1.0e-31 140.6 150 49.3
Ciclev10030973m.g Citrus clementina HOM05D005422 ORTHO05D006578 2.3e-31 139.4 140 47.9
FAN07G0746 Fragaria x ananassa HOM05D005422 ORTHO05D000550 2.3e-31 139.4 153 52.3
FAN22G2139 Fragaria x ananassa HOM05D005422 ORTHO05D000550 3.0e-31 139.0 151 50.3
Eucgr.B03458 Eucalyptus grandis HOM05D005422 ORTHO05D006578 3.9e-31 138.7 157 46.5
AUR62024162 Chenopodium quinoa HOM05D005422 ORTHO05D006578 5.1e-31 138.3 150 47.3
Manes.12G015200 Manihot esculenta HOM05D005422 ORTHO05D006578 5.1e-31 138.3 141 52.5
GSVIVG01010354001 Vitis vinifera HOM05D005422 ORTHO05D006578 5.1e-31 138.3 152 48.0
Ca_16485_v3 Cicer arietinum L. HOM05D005422 ORTHO05D006578 6.7e-31 137.9 121 55.4
FvH4_4g24380 Fragaria vesca HOM05D005422 ORTHO05D006578 8.8e-31 137.5 151 49.7
FAN17G0355 Fragaria x ananassa HOM05D005422 ORTHO05D006578 1.1e-30 137.1 151 49.7
Dinv14796 Davidia involucrata HOM05D005422 ORTHO05D006578 1.5e-30 136.7 150 48.7
ATR0743G050 Amborella trichopoda HOM05D005422 ORTHO05D006578 2.5e-30 136.0 152 48.7
Sabra10G0049200 Salix brachista HOM05D005422 ORTHO05D006578 2.5e-30 136.0 141 51.1
arahy.Tifrunner.gnm1.ann1.FGLE2H Arachis hypogaea HOM05D005422 ORTHO05D006578 3.3e-30 135.6 151 49.0
arahy.Tifrunner.gnm1.ann1.T7I6MJ Arachis hypogaea HOM05D005422 ORTHO05D006578 3.3e-30 135.6 151 49.0
Potri.010G055900 Populus trichocarpa HOM05D005422 ORTHO05D006578 4.3e-30 135.2 141 50.4
arahy.Tifrunner.gnm1.ann1.3L5TD6 Arachis hypogaea HOM05D005422 ORTHO05D006578 5.7e-30 134.8 151 49.0
CSS0043806 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 5.7e-30 134.8 150 50.0
CSS0029300 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 9.7e-30 134.0 150 50.0
PGR102G2427 Punica granatum HOM05D005422 ORTHO05D006578 9.7e-30 134.0 161 47.8
RcHm_v2.0_Chr4g0431221 Rosa chinensis HOM05D005422 ORTHO05D006578 1.7e-29 133.3 156 49.4
FAN12G3101 Fragaria x ananassa HOM05D005422 ORTHO05D006578 2.8e-29 132.5 151 48.3
CsaV3_1G006150 Cucumis sativus L. HOM05D005422 ORTHO05D006578 4.8e-29 131.7 113 50.4
arahy.Tifrunner.gnm1.ann1.IS07F8 Arachis hypogaea HOM05D005422 ORTHO05D006578 6.3e-29 131.3 95 62.1
Thhalv10018287m.g Eutrema salsugineum HOM05D005422 ORTHO05D006578 8.2e-29 131.0 113 53.1
PSO782G4908 Papaver somniferum HOM05D005422 ORTHO05D006578 8.2e-29 131.0 130 50.0
PSO063G3748 Papaver somniferum HOM05D005422 ORTHO05D006578 1.1e-28 130.6 130 50.0
MELO3C002044.2 Cucumis melo HOM05D005422 ORTHO05D006578 1.4e-28 130.2 113 50.4
ClCG04G011650 Citrullus lanatus HOM05D005422 ORTHO05D006578 1.8e-28 129.8 113 50.4
Glyma.18G009300 Glycine max HOM05D005422 ORTHO05D006578 1.8e-28 129.8 158 48.7
TPR.G22445 Trifolium pratense HOM05D005422 ORTHO05D006578 2.4e-28 129.4 114 54.4
vmacro16136 Vaccinium macrocarpon HOM05D005422 ORTHO05D006578 2.4e-28 129.4 150 48.7
AT1G67630 Arabidopsis thaliana HOM05D005422 ORTHO05D006578 4.1e-28 128.6 106 57.5
Actinidia33261 Actinidia chinensis HOM05D005422 ORTHO05D006578 5.3e-28 128.3 114 57.0
Prupe.1G233700 Prunus persica HOM05D005422 ORTHO05D006578 5.3e-28 128.3 142 48.6
Atru.chr11.2241 Acer truncatum HOM05D005422 ORTHO05D006578 6.9e-28 127.9 122 50.8
BolC2t08466H Brassica oleracea HOM05D005422 ORTHO05D006578 9.1e-28 127.5 111 53.2
C02p23270 Brassica napus HOM05D005422 ORTHO05D006578 1.2e-27 127.1 111 53.2
Carub.0002s1397 Capsella rubella HOM05D005422 ORTHO05D006578 1.2e-27 127.1 106 58.5
Psat5g094440 Pisum sativum HOM05D005422 ORTHO05D006578 1.2e-27 127.1 123 52.0
Atru.chr11.2256 Acer truncatum HOM05D005422 ORTHO05D006578 1.5e-27 126.7 152 45.4
BcaC03g14856 Brassica carinata HOM05D005422 ORTHO05D006578 1.5e-27 126.7 111 53.2
AL2G26300 Arabidopsis lyrata HOM05D005422 ORTHO05D006578 2.0e-27 126.3 106 55.7
Lalb_Chr04g0262801 Lupinus albus HOM05D005422 ORTHO05D006578 2.0e-27 126.3 128 52.3
Phvul.001G259300 Phaseolus vulgaris HOM05D005422 ORTHO05D006578 2.0e-27 126.3 160 46.9
Sp5g22630 Schrenkiella parvula HOM05D005422 ORTHO05D006578 2.0e-27 126.3 113 52.2
CiPaw.06G099500 Carya illinoinensis HOM05D005422 ORTHO05D006578 2.6e-27 125.9 112 52.7
Glyma.11G247900 Glycine max HOM05D005422 ORTHO05D006578 2.6e-27 125.9 158 48.1
Medtr3g085750 Medicago truncatula HOM05D005422 ORTHO05D006578 2.6e-27 125.9 114 51.8
QL03p054803 Quercus lobata HOM05D005422 ORTHO05D006578 3.4e-27 125.6 112 51.8
THA.LOC104807895 Tarenaya hassleriana HOM05D005422 ORTHO05D006578 3.4e-27 125.6 141 47.5
BcaB05g24303 Brassica carinata HOM05D005422 ORTHO05D006578 5.9e-27 124.8 111 52.3
A02p14390 Brassica napus HOM05D005422 ORTHO05D006578 7.7e-27 124.4 127 49.6
CARHR060210 Cardamine hirsuta HOM05D005422 ORTHO05D006578 1.0e-26 124.0 106 54.7
Oeu056686.1 Olea europaea HOM05D005422 ORTHO05D006578 1.0e-26 124.0 150 43.3
BraA02t06501Z Brassica rapa HOM05D005422 ORTHO05D006578 1.7e-26 123.2 109 52.3
DCAR_013710 Daucus carota HOM05D005422 ORTHO05D006578 3.8e-26 122.1 150 44.7
CANSAT01G0865 Cannabis sativa HOM05D005422 ORTHO05D006578 5.0e-26 121.7 132 50.0
Nitab4.5_0000240g0030 Nicotiana tabacum HOM05D005422 ORTHO05D006578 5.0e-26 121.7 150 46.0
Nitab4.5_0000581g0110 Nicotiana tabacum HOM05D005422 ORTHO05D006578 5.0e-26 121.7 150 46.0
DCAR_024084 Daucus carota HOM05D005422 ORTHO05D006578 6.5e-26 121.3 150 44.7
Gohir.A05G311350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 8.5e-26 120.9 150 42.7
Sed0011369 Sechium edule HOM05D005422 ORTHO05D006578 8.5e-26 120.9 115 49.6
Thecc.02G273900 Theobroma cacao HOM05D005422 ORTHO05D006578 1.1e-25 120.6 150 42.0
Lj6g0001538 Lotus japonicus HOM05D005422 ORTHO05D006578 1.4e-25 120.2 146 47.3
PGSC0003DMG400017439 Solanum tuberosum HOM05D005422 ORTHO05D006578 1.9e-25 119.8 150 46.0
SEGI_16764 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.5e-25 119.4 162 40.1
SEGI_31313 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.5e-25 119.4 162 40.1
Hma1.2p1_1340F.1_g276720 Hydrangea macrophylla HOM05D005422 ORTHO05D006578 4.2e-25 118.6 152 44.7
Gohir.D05G312350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 5.5e-25 118.2 150 42.0
Gorai.009G333700 Gossypium raimondii HOM05D005422 ORTHO05D006578 5.5e-25 118.2 150 42.0
MD13G1111800 Malus domestica HOM05D005422 ORTHO05D006578 5.5e-25 118.2 150 44.0
Lj6C821T7 Lonicera japonica HOM05D005422 ORTHO05D006578 7.2e-25 117.9 150 42.7
Solyc05g014540.3 Solanum lycopersicum HOM05D005422 ORTHO05D006578 7.2e-25 117.9 150 44.7
Peaxi162Scf00128g00843 Petunia axillaris HOM05D005422 ORTHO05D006578 9.4e-25 117.5 150 43.3
Sopen05g009590 Solanum pennellii HOM05D005422 ORTHO05D006578 9.4e-25 117.5 150 44.7
CAN.G163.4 Capsicum annuum HOM05D005422 ORTHO05D006578 1.2e-24 117.1 150 45.3
SEGI_15215 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.1e-24 116.3 160 40.0
Cc11_g16560 Coffea canephora HOM05D005422 ORTHO05D006578 7.9e-24 114.4 150 40.7
Duzib251G0558 Durio zibethinus HOM05D005422 ORTHO05D006578 1.4e-23 113.6 93 53.8
Lj6g0021706 Lotus japonicus HOM05D005422 ORTHO05D006578 2.3e-23 112.8 154 46.1
VMungo1383G2526 Vigna mungo HOM05D005422 ORTHO05D006578 6.7e-23 111.3 154 43.5
Rhsim12G0105700 Rhododendron simsii HOM05D005422 ORTHO05D006578 4.4e-22 108.6 174 39.1
MSTRG.7977 Avicennia marina HOM05D005422 ORTHO05D006578 7.4e-22 107.8 153 39.9
Lsat_1_v5_gn_3_29520 Lactuca sativa HOM05D005422 ORTHO05D006578 1.3e-21 107.1 150 42.0
Migut.K00694 Erythranthe guttata HOM05D005422 ORTHO05D006578 3.7e-21 105.5 153 39.2
HanXRQChr06g0174981 Helianthus annuus HOM05D005422 ORTHO05D006578 1.4e-20 103.6 150 40.0
ECA246G0814 Erigeron canadensis HOM05D005422 ORTHO05D006578 1.8e-20 103.2 150 39.3
unitig_35.g30204 Utricularia gibba HOM05D005422 ORTHO05D006578 1.2e-16 90.5 112 41.1
unitig_749.g13303 Utricularia gibba HOM05D005422 ORTHO05D006578 3.6e-16 89.0 150 35.3
Aa31LG4G12020 Aethionema arabicum HOM05D005422 ORTHO05D006578 1.4e-15 87.0 135 38.5
SGA_v2.0_scaffold46G17410 Striga asiatica HOM05D005422 ORTHO05D006578 2.3e-15 86.3 88 46.6
MBI18_g30536_MAGBIO Magnolia biondii HOM05D005422 ORTHO05D006578 1.5e-14 83.6 54 66.7
Pp3c10_15960 Physcomitrium patens HOM05D005422 ORTHO05D006578 6.3e-13 78.2 102 33.3
Duzib268G1013 Durio zibethinus HOM05D005422 ORTHO05D006578 8.2e-13 77.8 51 68.6
Mapoly0035s0099 Marchantia polymorpha HOM05D005422 ORTHO05D006578 5.3e-12 75.1 101 37.6
SHI17936 Sapria himalayana HOM05D005422 ORTHO05D006578 1.6e-11 73.6 113 35.4
COL.COLO4_23617 Corchorus olitorius HOM05D005422 ORTHO05D006578 1.3e-10 70.5 112 38.4
Zm00001eb409930 Zea mays HOM05D005422 ORTHO05D006578 1.5e-09 67.0 98 38.8
SMO164G0100 Selaginella moellendorffii HOM05D005422 ORTHO05D006578 6.7e-07 58.2 67 34.3
Potri.008G178951 Populus trichocarpa HOM05D005422 ORTHO05D006578 7.5e-06 54.7 50 52.0


User provided reference genes

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