Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024265 Vanilla planifolia HOM05D000595 ORTHO05D004141 9.0e-59 229.9 108 100.0
HPP92_028112 Vanilla planifolia HOM05D000595 ORTHO05D004141 4.5e-58 227.6 108 99.1
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.8e-54 215.7 100 100.0
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 3.2e-40 168.3 101 73.3
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 5.5e-40 167.5 101 72.3
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 5.5e-40 167.5 101 73.3
COL.COLO4_24689 Corchorus olitorius HOM05D000595 ORTHO05D004141 9.3e-40 166.8 101 70.3
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 1.6e-39 166.0 101 71.3
CANSAT21G1418 Cannabis sativa HOM05D000595 ORTHO05D004141 2.1e-39 165.6 101 71.3
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 2.7e-39 165.2 101 71.3
Haze_07993 Corylus avellana HOM05D000595 ORTHO05D004141 3.5e-39 164.9 101 70.3
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 3.5e-39 164.9 101 71.3
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 3.5e-39 164.9 101 69.3
vmacro00078 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 3.5e-39 164.9 101 70.3
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 4.6e-39 164.5 101 68.3
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 6.0e-39 164.1 101 70.3
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 6.0e-39 164.1 101 71.3
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 7.9e-39 163.7 101 68.3
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 1.0e-38 163.3 101 69.3
RcHm_v2.0_Chr7g0213921 Rosa chinensis HOM05D000595 ORTHO05D004141 1.0e-38 163.3 101 69.3
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 1.0e-38 163.3 101 69.3
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 1.0e-38 163.3 101 69.3
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 1.0e-38 163.3 101 69.3
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 1.0e-38 163.3 101 71.3
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 1.3e-38 162.9 100 70.0
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 1.3e-38 162.9 101 69.3
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 1.8e-38 162.5 101 69.3
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 1.8e-38 162.5 101 69.3
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 2.3e-38 162.2 100 70.0
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 3.0e-38 161.8 101 69.3
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 3.0e-38 161.8 100 70.0
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 5.1e-38 161.0 101 70.3
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 6.7e-38 160.6 101 70.3
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 6.7e-38 160.6 101 69.3
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 8.7e-38 160.2 101 70.3
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 8.7e-38 160.2 101 71.3
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 1.1e-37 159.8 101 68.3
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 1.5e-37 159.5 101 70.3
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 1.5e-37 159.5 101 68.3
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 1.5e-37 159.5 101 70.3
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.9e-37 159.1 101 65.3
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 1.9e-37 159.1 101 66.3
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 1.9e-37 159.1 101 67.3
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 2.5e-37 158.7 101 69.3
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 2.5e-37 158.7 101 65.3
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 2.5e-37 158.7 101 68.3
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 2.5e-37 158.7 101 66.3
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 3.3e-37 158.3 101 70.3
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 3.3e-37 158.3 100 70.0
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 3.3e-37 158.3 101 68.3
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 4.3e-37 157.9 101 66.3
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 4.3e-37 157.9 100 69.0
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 5.7e-37 157.5 101 68.3
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 7.4e-37 157.1 100 69.0
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 7.4e-37 157.1 101 68.3
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 9.7e-37 156.8 101 65.3
Cpa.g.sc71.50 Carica papaya HOM05D000595 ORTHO05D004141 9.7e-37 156.8 101 69.3
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 1.3e-36 156.4 101 65.3
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 1.3e-36 156.4 101 65.3
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 1.6e-36 156.0 101 64.4
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 1.6e-36 156.0 101 69.3
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 1.6e-36 156.0 101 69.3
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 2.8e-36 155.2 100 67.0
Cfa012656 Carpinus fangiana HOM05D000595 ORTHO05D004141 2.8e-36 155.2 99 67.7
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 2.8e-36 155.2 100 67.0
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 4.8e-36 154.5 101 67.3
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 4.8e-36 154.5 101 67.3
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 4.8e-36 154.5 100 72.0
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 6.3e-36 154.1 101 68.3
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 8.2e-36 153.7 105 62.9
GSVIVG01036947001 Vitis vinifera HOM05D000595 ORTHO05D004141 8.2e-36 153.7 100 68.0
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 1.4e-35 152.9 101 64.4
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.4e-35 152.9 100 67.0
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 1.8e-35 152.5 100 66.0
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.4e-35 152.1 101 64.4
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 2.4e-35 152.1 120 58.3
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 2.4e-35 152.1 101 64.4
MBI04_g21144_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 3.1e-35 151.8 100 71.0
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 4.1e-35 151.4 101 67.3
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 4.1e-35 151.4 101 63.4
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 4.1e-35 151.4 101 63.4
Sp3g21350 Schrenkiella parvula HOM05D000595 ORTHO05D004141 4.1e-35 151.4 101 66.3
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 4.1e-35 151.4 100 67.0
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 5.3e-35 151.0 101 66.3
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 5.3e-35 151.0 101 62.4
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 6.9e-35 150.6 101 63.4
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 9.0e-35 150.2 101 65.3
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 1.2e-34 149.8 100 66.0
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.5e-34 149.4 100 63.0
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 1.5e-34 149.4 100 62.0
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 2.0e-34 149.1 101 66.3
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 2.0e-34 149.1 101 65.3
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 2.6e-34 148.7 100 65.0
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 2.6e-34 148.7 101 64.4
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 3.4e-34 148.3 101 63.4
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 5.9e-34 147.5 102 63.7
CARHR000110 Cardamine hirsuta HOM05D000595 ORTHO05D004141 5.9e-34 147.5 101 64.4
BcaB04g20430 Brassica carinata HOM05D000595 ORTHO05D004141 7.6e-34 147.1 100 64.0
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 1.0e-33 146.7 101 59.4
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 1.0e-33 146.7 101 62.4
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 1.3e-33 146.4 100 65.0
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 1.7e-33 146.0 101 64.4
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 1.7e-33 146.0 101 59.4
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 8.5e-33 143.7 100 65.0
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 1.4e-32 142.9 100 64.0
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 1.4e-32 142.9 101 61.4
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 3.2e-32 141.7 101 61.4
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 5.5e-32 141.0 100 63.0
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 5.5e-32 141.0 101 60.4
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 1.2e-31 139.8 101 63.4
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 1.2e-31 139.8 101 63.4
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 1.6e-31 139.4 100 61.0
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 2.1e-31 139.0 101 62.4
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 7.9e-31 137.1 98 63.3
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 1.0e-30 136.7 101 57.4
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 2.3e-30 135.6 101 58.4
FAN18G1127 Fragaria x ananassa HOM05D000595 ORTHO05D004141 9.7e-29 130.2 78 69.2
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 2.8e-28 128.6 101 57.4
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.8e-28 128.6 102 52.9
Thecc.05G000100 Theobroma cacao HOM05D000595 ORTHO05D004141 1.4e-27 126.3 94 59.6
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 4.1e-27 124.8 101 55.4
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.9e-25 118.6 102 52.9
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 2.9e-25 118.6 101 51.5
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.4e-24 116.3 102 53.9
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 4.2e-24 114.8 102 52.0
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 5.5e-24 114.4 75 68.0
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 3.6e-23 111.7 101 52.5
Mapoly0059s0108 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.0e-22 110.2 101 51.5
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 5.1e-22 107.8 102 47.1
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 1.9e-08 62.8 43 65.1


User provided reference genes

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