Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 1.5e-83 312.8 151 100.0
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 2.1e-45 186.0 136 66.2
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 3.5e-45 185.3 136 68.4
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 1.5e-43 179.9 136 64.7
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 2.1e-42 176.0 132 65.2
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 2.1e-42 176.0 129 65.9
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 2.8e-42 175.6 136 64.0
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 4.8e-42 174.9 135 65.9
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 6.3e-42 174.5 131 64.1
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 3.1e-41 172.2 129 65.1
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 4.1e-41 171.8 127 67.7
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 4.1e-41 171.8 134 63.4
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 5.3e-41 171.4 134 63.4
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 6.9e-41 171.0 133 63.2
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 9.0e-41 170.6 129 63.6
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 9.0e-41 170.6 129 63.6
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 9.0e-41 170.6 129 64.3
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 1.2e-40 170.2 134 63.4
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 1.2e-40 170.2 137 62.8
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 2.0e-40 169.5 131 61.1
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 2.0e-40 169.5 130 63.8
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 2.6e-40 169.1 133 64.7
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 2.6e-40 169.1 136 62.5
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 2.6e-40 169.1 138 60.1
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 3.4e-40 168.7 134 61.9
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 4.5e-40 168.3 135 60.7
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 1.0e-39 167.2 143 58.7
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 1.0e-39 167.2 129 63.6
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 1.0e-39 167.2 136 61.0
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 1.3e-39 166.8 138 61.6
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 2.2e-39 166.0 136 61.0
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 2.9e-39 165.6 129 62.0
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 2.9e-39 165.6 134 62.7
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.9e-39 165.6 134 62.7
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 3.8e-39 165.2 131 60.3
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 6.5e-39 164.5 135 60.7
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 8.5e-39 164.1 131 61.8
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 8.5e-39 164.1 131 61.8
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 8.5e-39 164.1 132 62.9
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 8.5e-39 164.1 134 60.4
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 1.1e-38 163.7 134 61.9
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 1.1e-38 163.7 106 72.6
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 1.1e-38 163.7 138 60.9
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.4e-38 163.3 134 61.2
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.4e-38 163.3 134 61.2
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 1.4e-38 163.3 131 64.9
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 3.2e-38 162.2 132 59.8
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 3.2e-38 162.2 131 59.5
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 3.2e-38 162.2 128 59.4
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 4.2e-38 161.8 132 62.9
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 4.2e-38 161.8 134 60.4
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 5.5e-38 161.4 129 60.5
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 5.5e-38 161.4 129 60.5
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 5.5e-38 161.4 129 60.5
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 9.3e-38 160.6 134 61.2
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 1.2e-37 160.2 148 56.1
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 1.2e-37 160.2 103 71.8
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 2.1e-37 159.5 129 59.7
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 4.6e-37 158.3 136 57.4
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 4.6e-37 158.3 111 69.4
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 7.9e-37 157.5 125 60.0
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 1.0e-36 157.1 133 60.9
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 1.3e-36 156.8 198 45.5
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 1.8e-36 156.4 136 56.6
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 2.3e-36 156.0 130 61.5
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 3.0e-36 155.6 110 69.1
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 3.0e-36 155.6 130 60.8
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 5.1e-36 154.8 138 55.8
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 5.1e-36 154.8 129 61.2
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 1.1e-35 153.7 148 53.4
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 1.1e-35 153.7 129 60.5
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 1.9e-35 152.9 130 60.8
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 3.3e-35 152.1 100 70.0
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 7.4e-35 151.0 136 56.6
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 9.7e-35 150.6 127 59.1
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 9.7e-35 150.6 120 63.3
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 1.3e-34 150.2 101 69.3
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 1.3e-34 150.2 137 58.4
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 3.7e-34 148.7 136 55.1
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 6.3e-34 147.9 139 57.6
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 8.2e-34 147.5 132 58.3
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 3.1e-33 145.6 124 59.7
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 9.1e-33 144.1 127 56.7
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 1.2e-32 143.7 125 57.6
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 2.6e-32 142.5 135 54.8
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 5.9e-32 141.4 128 56.2
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 7.2e-30 134.4 159 49.1
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 2.7e-29 132.5 94 64.9
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 1.0e-28 130.6 113 61.1
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 5.7e-27 124.8 137 48.2
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 5.7e-27 124.8 137 48.2
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 1.3e-26 123.6 117 53.0
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 1.7e-23 113.2 77 71.4
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 3.8e-23 112.1 61 78.7
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 3.8e-23 112.1 111 56.8
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 5.0e-23 111.7 56 85.7
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 1.9e-22 109.8 63 76.2
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 3.6e-21 105.5 55 81.8
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 1.8e-20 103.2 56 76.8
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 1.5e-14 83.6 137 40.1
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 3.1e-09 65.9 81 48.1


User provided reference genes

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