Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 2.5e-84 315.5 167 100.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 1.2e-38 163.7 164 53.0
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.6e-38 163.3 165 55.8
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.7e-38 162.5 164 54.3
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.4e-37 160.2 170 54.1
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 1.8e-37 159.8 149 59.7
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 3.0e-37 159.1 185 51.9
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 5.1e-37 158.3 165 52.7
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 3.3e-36 155.6 147 55.8
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 5.7e-36 154.8 169 53.3
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 7.4e-36 154.5 166 53.0
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 9.7e-36 154.1 148 56.1
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.2e-35 152.9 155 52.9
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 6.3e-35 151.4 165 52.1
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 8.2e-35 151.0 167 51.5
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 1.1e-34 150.6 171 51.5
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 1.8e-34 149.8 164 51.2
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.8e-34 149.8 163 55.2
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 6.9e-34 147.9 167 52.1
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 6.9e-34 147.9 164 52.4
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 9.1e-34 147.5 164 51.2
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 2.0e-33 146.4 152 53.3
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 2.6e-33 146.0 169 49.1
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.4e-33 145.6 163 52.1
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 3.4e-33 145.6 141 57.4
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 5.9e-33 144.8 165 50.9
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.0e-32 144.1 167 50.9
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.3e-32 143.7 147 55.1
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.9e-32 142.5 165 49.1
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 3.8e-32 142.1 165 49.1
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 5.0e-32 141.7 162 51.9
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 6.5e-32 141.4 164 50.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 6.5e-32 141.4 157 52.2
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.1e-31 140.6 146 52.7
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.5e-31 139.4 166 49.4
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.2e-31 139.0 166 49.4
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 5.5e-31 138.3 156 48.7
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 7.2e-31 137.9 165 48.5
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 7.2e-31 137.9 157 52.2
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 7.2e-31 137.9 154 51.9
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 9.4e-31 137.5 164 51.2
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 1.2e-30 137.1 148 51.4
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.2e-30 137.1 159 49.7
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.2e-30 137.1 162 48.8
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 2.1e-30 136.3 166 49.4
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 2.7e-30 136.0 159 49.1
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 2.7e-30 136.0 147 53.1
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.7e-30 136.0 152 52.0
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 2.7e-30 136.0 165 49.1
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 4.7e-30 135.2 142 54.2
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 6.1e-30 134.8 161 49.1
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 6.1e-30 134.8 165 49.7
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.4e-29 133.7 127 60.6
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.4e-29 133.7 152 48.0
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 1.8e-29 133.3 154 50.6
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 2.3e-29 132.9 159 49.7
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 3.0e-29 132.5 165 46.1
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 3.0e-29 132.5 147 50.3
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.9e-29 132.1 168 50.6
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.8e-29 131.0 165 49.7
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 8.8e-29 131.0 148 50.0
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.5e-28 130.2 158 48.7
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.6e-28 129.4 146 50.7
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 2.6e-28 129.4 147 49.7
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 2.6e-28 129.4 174 48.9
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 3.3e-28 129.0 193 42.5
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 9.7e-28 127.5 154 48.1
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 1.7e-27 126.7 151 51.0
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 4.8e-27 125.2 140 47.9
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 8.2e-27 124.4 138 50.7
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 1.1e-26 124.0 166 50.0
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.4e-26 123.6 160 47.5
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.4e-26 123.6 157 49.0
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 1.8e-26 123.2 142 49.3
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 3.1e-26 122.5 150 49.3
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 4.1e-26 122.1 163 50.3
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 4.1e-26 122.1 148 49.3
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.1e-26 122.1 155 47.1
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 5.3e-26 121.7 166 47.0
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 5.3e-26 121.7 165 45.5
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 6.9e-26 121.3 147 50.3
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 6.9e-26 121.3 161 46.6
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 9.1e-26 120.9 166 47.0
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.5e-25 120.2 145 51.7
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.6e-25 119.4 164 45.1
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 2.6e-25 119.4 161 47.2
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 7.7e-25 117.9 143 53.1
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 7.7e-25 117.9 143 52.4
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.7e-24 116.7 154 46.8
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 2.9e-24 115.9 143 51.7
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 2.9e-24 115.9 168 45.2
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 3.8e-24 115.5 195 44.6
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 6.5e-24 114.8 165 45.5
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 8.5e-24 114.4 167 46.7
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 8.5e-24 114.4 159 47.2
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 1.1e-23 114.0 165 45.5
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 1.1e-23 114.0 165 45.5
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.4e-23 113.6 161 46.0
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 1.9e-23 113.2 139 51.1
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 2.5e-23 112.8 163 46.6
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 3.2e-23 112.5 160 49.4
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 3.2e-23 112.5 158 47.5
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 5.5e-23 111.7 159 47.2
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 5.5e-23 111.7 163 42.9
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 7.2e-23 111.3 160 45.6
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-22 110.5 159 45.9
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 3.6e-22 109.0 165 44.2
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 6.1e-22 108.2 164 44.5
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 6.1e-22 108.2 158 43.7
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 6.1e-22 108.2 153 46.4
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.4e-21 107.1 165 44.2
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 2.3e-21 106.3 162 42.0
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.3e-21 106.3 162 42.0
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 2.3e-21 106.3 138 47.8
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 3.0e-21 105.9 157 43.3
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.9e-21 105.5 147 46.9
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 5.2e-21 105.1 165 44.8
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 5.2e-21 105.1 165 44.8
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 8.8e-21 104.4 137 48.2
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 1.1e-20 104.0 160 40.6
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.1e-20 104.0 165 43.6
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 2.6e-20 102.8 166 44.0
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.3e-20 102.4 147 45.6
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.3e-20 102.4 164 43.3
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 2.2e-19 99.8 153 43.1
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 2.8e-19 99.4 143 46.9
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 5.3e-18 95.1 125 49.6
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 1.2e-17 94.0 143 44.1
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 1.6e-17 93.6 140 42.1
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 2.6e-17 92.8 130 40.0
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 5.9e-17 91.7 156 42.9
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 1.3e-16 90.5 159 39.0
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 2.2e-16 89.7 89 56.2
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 2.2e-16 89.7 89 56.2
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 6.5e-16 88.2 157 44.6
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.5e-15 87.0 166 39.8
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 3.2e-15 85.9 166 39.2
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 7.2e-15 84.7 129 41.1
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.2e-14 84.0 135 44.4
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 3.6e-14 82.4 159 35.8
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.0e-13 80.9 135 43.0
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 2.3e-13 79.7 156 41.7
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.3e-13 79.7 122 44.3
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.3e-13 79.7 122 44.3
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 6.7e-13 78.2 155 36.8
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 2.6e-12 76.3 138 37.0
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 9.7e-12 74.3 74 52.7
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 2.2e-11 73.2 73 54.8
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 4.8e-11 72.0 104 50.0
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 6.3e-11 71.6 138 36.2
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 1.1e-10 70.9 138 37.7
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 4.1e-10 68.9 89 48.3
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.1e-10 68.9 70 50.0
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 1.6e-09 67.0 68 55.9
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 1.6e-09 67.0 100 42.0
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.0e-09 66.6 68 54.4
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 2.7e-09 66.2 158 34.2
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 5.9e-09 65.1 124 37.1
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 2.2e-08 63.2 88 43.2
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.9e-08 62.8 67 53.7
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 3.8e-08 62.4 141 29.1
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 5.0e-08 62.0 72 47.2
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 7.2e-07 58.2 77 44.2


User provided reference genes

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