Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024251 Vanilla planifolia HOM05D005860 ORTHO05D006977 2.3e-82 308.9 160 100.0
PGSC0003DMG400020220 Solanum tuberosum HOM05D005860 ORTHO05D006977 3.2e-20 102.4 100 52.0
TAR622G0256 Trochodendron aralioides HOM05D005860 ORTHO05D006977 3.2e-20 102.4 92 57.6
GSVIVG01001819001 Vitis vinifera HOM05D005860 ORTHO05D006977 1.2e-19 100.5 96 57.3
Duzib116G0811 Durio zibethinus HOM05D005860 ORTHO05D006977 1.6e-19 100.1 93 54.8
COL.COLO4_03595 Corchorus olitorius HOM05D005860 ORTHO05D006977 2.1e-19 99.8 92 53.3
Solyc02g093940.3 Solanum lycopersicum HOM05D005860 ORTHO05D006977 2.1e-19 99.8 98 51.0
Sopen02g038590 Solanum pennellii HOM05D005860 ORTHO05D006977 2.1e-19 99.8 98 51.0
CiPaw.04G034700 Carya illinoinensis HOM05D005860 ORTHO05D006977 2.7e-19 99.4 90 55.6
SalBow1G3206 Salvia bowleyana HOM05D005860 ORTHO05D006977 2.7e-19 99.4 91 54.9
SalBow7G2829 Salvia bowleyana HOM05D005860 ORTHO05D006977 2.7e-19 99.4 91 54.9
Nitab4.5_0002887g0110 Nicotiana tabacum HOM05D005860 ORTHO05D006977 4.6e-19 98.6 94 48.9
Thecc.08G160800 Theobroma cacao HOM05D005860 ORTHO05D006977 4.6e-19 98.6 92 53.3
Haze_14838 Corylus avellana HOM05D005860 ORTHO05D006977 6.0e-19 98.2 91 52.7
Actinidia30891 Actinidia chinensis HOM05D005860 ORTHO05D006977 1.0e-18 97.4 97 52.6
Lj7A609T51 Lonicera japonica HOM05D005860 ORTHO05D006977 1.0e-18 97.4 87 57.5
CAN.G473.79 Capsicum annuum HOM05D005860 ORTHO05D006977 1.3e-18 97.1 105 45.7
Manes.15G158200 Manihot esculenta HOM05D005860 ORTHO05D006977 1.3e-18 97.1 92 53.3
Nn4g22386 Nelumbo nucifera HOM05D005860 ORTHO05D006977 1.8e-18 96.7 94 54.3
Nitab4.5_0009757g0020 Nicotiana tabacum HOM05D005860 ORTHO05D006977 3.0e-18 95.9 97 48.5
CSS0015596 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 3.9e-18 95.5 96 50.0
Peaxi162Scf00420g00442 Petunia axillaris HOM05D005860 ORTHO05D006977 5.1e-18 95.1 90 52.2
ClCG01G016270 Citrullus lanatus HOM05D005860 ORTHO05D006977 8.7e-18 94.4 93 48.4
Rhsim08G0044400 Rhododendron simsii HOM05D005860 ORTHO05D006977 8.7e-18 94.4 95 50.5
Sed0023405 Sechium edule HOM05D005860 ORTHO05D006977 1.1e-17 94.0 94 48.9
Oeu058768.1 Olea europaea HOM05D005860 ORTHO05D006977 1.5e-17 93.6 92 51.1
CSS0028115 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 2.5e-17 92.8 88 52.3
Cpa.g.sc171.37 Carica papaya HOM05D005860 ORTHO05D006977 2.5e-17 92.8 104 48.1
Ciclev10011572m.g Citrus clementina HOM05D005860 ORTHO05D006977 2.5e-17 92.8 95 50.5
Sabra17G0063700 Salix brachista HOM05D005860 ORTHO05D006977 2.5e-17 92.8 93 49.5
TWI56G1326 Tripterygium wilfordii HOM05D005860 ORTHO05D006977 2.5e-17 92.8 94 51.1
TAR629G2046 Trochodendron aralioides HOM05D005860 ORTHO05D006977 2.5e-17 92.8 93 50.5
Oeu050423.1 Olea europaea HOM05D005860 ORTHO05D006977 3.3e-17 92.4 93 49.5
Gorai.011G077700 Gossypium raimondii HOM05D005860 ORTHO05D006977 4.3e-17 92.0 82 58.5
Gohir.D10G072200 Gossypium hirsutum HOM05D005860 ORTHO05D006977 7.4e-17 91.3 82 58.5
CANSAT64G0040 Cannabis sativa HOM05D005860 ORTHO05D006977 9.6e-17 90.9 90 51.1
Cc02_g00900 Coffea canephora HOM05D005860 ORTHO05D006977 9.6e-17 90.9 64 64.1
Eucgr.J02311 Eucalyptus grandis HOM05D005860 ORTHO05D006977 9.6e-17 90.9 92 52.2
CsaV3_6G042570 Cucumis sativus L. HOM05D005860 ORTHO05D006977 1.3e-16 90.5 93 46.2
Migut.K01447 Erythranthe guttata HOM05D005860 ORTHO05D006977 1.3e-16 90.5 96 52.1
Aqoxy5G03469 Aquilegia oxysepala HOM05D005860 ORTHO05D006977 1.6e-16 90.1 65 63.1
Gohir.A10G079300 Gossypium hirsutum HOM05D005860 ORTHO05D006977 1.6e-16 90.1 82 57.3
DCAR_021767 Daucus carota HOM05D005860 ORTHO05D006977 2.8e-16 89.4 64 64.1
PGR083G1804 Punica granatum HOM05D005860 ORTHO05D006977 2.8e-16 89.4 85 56.5
QL02p072028 Quercus lobata HOM05D005860 ORTHO05D006977 2.8e-16 89.4 92 51.1
RcHm_v2.0_Chr2g0174841 Rosa chinensis HOM05D005860 ORTHO05D006977 2.8e-16 89.4 90 48.9
Sc16g0003100 Simmondsia chinensis HOM05D005860 ORTHO05D006977 2.8e-16 89.4 77 58.4
EL10Ac1g02122 Beta vulgaris HOM05D005860 ORTHO05D006977 3.7e-16 89.0 64 64.1
Ah.03g142080 Amaranthus hybridus HOM05D005860 ORTHO05D006977 4.8e-16 88.6 64 64.1
MELO3C007497.2 Cucumis melo HOM05D005860 ORTHO05D006977 4.8e-16 88.6 93 45.2
FAN05G4081 Fragaria x ananassa HOM05D005860 ORTHO05D006977 4.8e-16 88.6 92 48.9
FAN09G0694 Fragaria x ananassa HOM05D005860 ORTHO05D006977 4.8e-16 88.6 92 48.9
Lj2g0013553 Lotus japonicus HOM05D005860 ORTHO05D006977 6.2e-16 88.2 100 50.0
Potri.017G067600 Populus trichocarpa HOM05D005860 ORTHO05D006977 6.2e-16 88.2 87 50.6
Atru.chr4.382 Acer truncatum HOM05D005860 ORTHO05D006977 8.2e-16 87.8 96 47.9
MSTRG.15567 Avicennia marina HOM05D005860 ORTHO05D006977 1.1e-15 87.4 140 39.3
CDE09G0687 Ceratophyllum demersum HOM05D005860 ORTHO05D006977 1.1e-15 87.4 90 53.3
Dinv19535 Davidia involucrata HOM05D005860 ORTHO05D006977 1.4e-15 87.0 64 64.1
FvH4_6g53060 Fragaria vesca HOM05D005860 ORTHO05D006977 1.4e-15 87.0 92 47.8
FAN14G2391 Fragaria x ananassa HOM05D005860 ORTHO05D006977 1.4e-15 87.0 92 47.8
MD17G1015100 Malus domestica HOM05D005860 ORTHO05D006977 2.4e-15 86.3 90 47.8
ATR0686G114 Amborella trichopoda HOM05D005860 ORTHO05D006977 3.1e-15 85.9 88 52.3
BcaNung00353 Brassica carinata HOM05D005860 ORTHO05D006977 3.1e-15 85.9 66 57.6
unitig_0.g543 Utricularia gibba HOM05D005860 ORTHO05D006977 4.0e-15 85.5 88 51.1
vmacro18330 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 4.0e-15 85.5 95 45.3
Lalb_Chr02g0157831 Lupinus albus HOM05D005860 ORTHO05D006977 5.3e-15 85.1 92 48.9
BcaC09g50132 Brassica carinata HOM05D005860 ORTHO05D006977 6.9e-15 84.7 66 56.1
A01p23060 Brassica napus HOM05D005860 ORTHO05D006977 6.9e-15 84.7 66 56.1
C01p28690 Brassica napus HOM05D005860 ORTHO05D006977 6.9e-15 84.7 66 56.1
BolC1t02795H Brassica oleracea HOM05D005860 ORTHO05D006977 6.9e-15 84.7 66 56.1
BraA01t02219Z Brassica rapa HOM05D005860 ORTHO05D006977 6.9e-15 84.7 66 56.1
Hma1.2p1_1219F.1_g267900 Hydrangea macrophylla HOM05D005860 ORTHO05D006977 6.9e-15 84.7 98 43.9
CARHR220830 Cardamine hirsuta HOM05D005860 ORTHO05D006977 9.0e-15 84.3 60 58.3
Lju41A50T54 Lonicera japonica HOM05D005860 ORTHO05D006977 9.0e-15 84.3 64 64.1
VMungo0464G0018 Vigna mungo HOM05D005860 ORTHO05D006977 9.0e-15 84.3 88 54.5
AUR62032474 Chenopodium quinoa HOM05D005860 ORTHO05D006977 1.2e-14 84.0 64 59.4
Rhsim08G0044800 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.2e-14 84.0 92 48.9
THA.LOC104825612 Tarenaya hassleriana HOM05D005860 ORTHO05D006977 1.2e-14 84.0 60 63.3
PSO782G4049 Papaver somniferum HOM05D005860 ORTHO05D006977 2.0e-14 83.2 82 50.0
SGA_v2.0_scaffold7G03541 Striga asiatica HOM05D005860 ORTHO05D006977 2.0e-14 83.2 61 60.7
TPR.G5727 Trifolium pratense HOM05D001503 ORTHO05D003820 2.0e-14 83.2 89 50.6
AT4G14605 Arabidopsis thaliana HOM05D005860 ORTHO05D006977 2.6e-14 82.8 60 56.7
arahy.Tifrunner.gnm1.ann1.SB3XQV Arachis hypogaea HOM05D005860 ORTHO05D006977 2.6e-14 82.8 91 50.5
Carub.0007s2760 Capsella rubella HOM05D005860 ORTHO05D006977 2.6e-14 82.8 60 56.7
arahy.Tifrunner.gnm1.ann1.WZ54PF Arachis hypogaea HOM05D005860 ORTHO05D006977 3.4e-14 82.4 89 48.3
Glyma.09G171700 Glycine max HOM05D005860 ORTHO05D006977 3.4e-14 82.4 91 51.6
PSO478G3943 Papaver somniferum HOM05D005860 ORTHO05D006977 3.4e-14 82.4 102 44.1
Rhsim08G0044700 Rhododendron simsii HOM05D005860 ORTHO05D006977 3.4e-14 82.4 90 46.7
vmacro18326 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 3.4e-14 82.4 75 52.0
AUR62043070 Chenopodium quinoa HOM05D005860 ORTHO05D006977 4.5e-14 82.0 64 59.4
Phvul.004G147000 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 4.5e-14 82.0 99 48.5
AL7G41520 Arabidopsis lyrata HOM05D005860 ORTHO05D006977 5.8e-14 81.6 60 56.7
PSO017G5933 Papaver somniferum HOM05D005860 ORTHO05D006977 7.6e-14 81.3 102 44.1
PSO063G3212 Papaver somniferum HOM05D005860 ORTHO05D006977 7.6e-14 81.3 75 53.3
Sed0015041 Sechium edule HOM05D005860 ORTHO05D006977 1.0e-13 80.9 91 46.2
Haze_00763 Corylus avellana HOM05D005860 ORTHO05D006977 1.3e-13 80.5 88 46.6
Migut.C00523 Erythranthe guttata HOM05D005860 ORTHO05D006977 1.7e-13 80.1 64 59.4
Thhalv10025001m.g Eutrema salsugineum HOM05D005860 ORTHO05D006977 1.7e-13 80.1 60 56.7
Medtr2g034600 Medicago truncatula HOM05D005860 ORTHO05D006977 2.2e-13 79.7 80 55.0
Phvul.004G055500 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 2.2e-13 79.7 89 49.4
Zm00001eb246440 Zea mays HOM05D005860 ORTHO05D006977 2.9e-13 79.3 77 58.4
Sp7g12700 Schrenkiella parvula HOM05D005860 ORTHO05D006977 4.9e-13 78.6 87 43.7
Hund24045 Selenicereus undatus HOM05D005860 ORTHO05D006977 4.9e-13 78.6 57 66.7
Rhsim08G0044500 Rhododendron simsii HOM05D005860 ORTHO05D006977 6.5e-13 78.2 87 47.1
Aa31LG9G2730 Aethionema arabicum HOM05D005860 ORTHO05D006977 1.1e-12 77.4 57 57.9
vmacro18328 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 1.1e-12 77.4 70 50.0
Glyma.19G075100 Glycine max HOM05D005860 ORTHO05D006977 3.2e-12 75.9 92 45.7
Psat1g161720 Pisum sativum HOM05D005860 ORTHO05D006977 3.2e-12 75.9 89 47.2
Glyma.05G075600 Glycine max HOM05D005860 ORTHO05D006977 4.2e-12 75.5 96 43.8
HanXRQChr15g0486891 Helianthus annuus HOM05D005860 ORTHO05D006977 2.1e-11 73.2 90 45.6
Rhsim08G0045000 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.7e-11 72.8 96 42.7
ECA232G2764 Erigeron canadensis HOM05D005860 ORTHO05D006977 6.1e-11 71.6 89 43.8
Sed0001458 Sechium edule HOM05D005860 ORTHO05D006977 1.8e-10 70.1 92 41.3
Cfa015733 Carpinus fangiana HOM05D005860 ORTHO05D006977 1.1e-09 67.4 44 65.9
Mapoly0029s0044 Marchantia polymorpha HOM05D005860 ORTHO05D006977 6.3e-08 61.6 55 52.7
FAN07G1018 Fragaria x ananassa HOM05D000113 ORTHO05D008562 4.5e-06 55.5 67 50.7
FAN17G0948 Fragaria x ananassa HOM05D000113 ORTHO05D008562 4.5e-06 55.5 67 50.7
FAN22G1629 Fragaria x ananassa HOM05D000113 ORTHO05D008562 4.5e-06 55.5 67 50.7
Pp3c15_12290 Physcomitrium patens HOM05D005860 ORTHO05D006977 4.5e-06 55.5 64 45.3


User provided reference genes

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