Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024167 Vanilla planifolia HOM05D006052 ORTHO05D007319 1.1e-89 333.2 164 100.0
CDE02G2125 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 1.3e-37 160.2 85 84.7
CDE08G0656 Ceratophyllum demersum HOM05D006052 ORTHO05D007319 2.3e-37 159.5 82 87.8
MBI04_g27065_MAGBIO Magnolia biondii HOM05D006052 ORTHO05D007319 3.0e-37 159.1 93 81.7
Manes.04G131832 Manihot esculenta HOM05D006052 ORTHO05D007319 1.1e-36 157.1 93 79.6
Nn3g18169 Nelumbo nucifera HOM05D006052 ORTHO05D007319 1.2e-35 153.7 93 74.2
Potri.001G187200 Populus trichocarpa HOM05D006052 ORTHO05D007319 1.6e-35 153.3 88 79.5
TAR626G0898 Trochodendron aralioides HOM05D006052 ORTHO05D007319 2.1e-35 152.9 93 76.3
TAR636G2101 Trochodendron aralioides HOM05D006052 ORTHO05D007319 2.1e-35 152.9 93 76.3
Haze_16332 Corylus avellana HOM05D006052 ORTHO05D007319 3.6e-35 152.1 93 78.5
ClCG09G001790 Citrullus lanatus HOM05D006052 ORTHO05D007319 6.2e-35 151.4 86 81.4
Zm00001eb002070 Zea mays HOM05D006052 ORTHO05D007319 6.2e-35 151.4 79 87.3
Gohir.A05G128200 Gossypium hirsutum HOM05D006052 ORTHO05D007319 8.0e-35 151.0 85 78.8
CSS0026597 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 1.1e-34 150.6 93 75.3
PSO566G0324 Papaver somniferum HOM05D006052 ORTHO05D007319 1.1e-34 150.6 81 85.2
Thecc.06G096200 Theobroma cacao HOM05D006052 ORTHO05D007319 1.1e-34 150.6 93 75.3
Zm00001eb295530 Zea mays HOM05D006052 ORTHO05D007319 1.4e-34 150.2 79 86.1
Eucgr.F03060 Eucalyptus grandis HOM05D006052 ORTHO05D007319 1.8e-34 149.8 84 79.8
TWI18G1030 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 1.8e-34 149.8 93 75.3
Dinv37999 Davidia involucrata HOM05D006052 ORTHO05D007319 2.3e-34 149.4 89 77.5
vmacro16981 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 2.3e-34 149.4 99 70.7
Cc04_g02780 Coffea canephora HOM05D006052 ORTHO05D007319 3.1e-34 149.1 85 80.0
Gohir.D05G132700 Gossypium hirsutum HOM05D006052 ORTHO05D007319 3.1e-34 149.1 85 77.6
Gorai.009G136400 Gossypium raimondii HOM05D006052 ORTHO05D007319 3.1e-34 149.1 85 77.6
CSS0014721 Camellia sinensis var. sinensis HOM05D006052 ORTHO05D007319 4.0e-34 148.7 89 77.5
CiPaw.01G233600 Carya illinoinensis HOM05D006052 ORTHO05D007319 4.0e-34 148.7 93 76.3
Hma1.2p1_1689F.1_g297700 Hydrangea macrophylla HOM05D006052 ORTHO05D007319 4.0e-34 148.7 81 84.0
Prupe.3G063000 Prunus persica HOM05D006052 ORTHO05D007319 5.2e-34 148.3 93 77.4
DCAR_026339 Daucus carota HOM05D006052 ORTHO05D007319 6.8e-34 147.9 93 76.3
Dinv32171 Davidia involucrata HOM05D006052 ORTHO05D007319 6.8e-34 147.9 82 82.9
Nitab4.5_0003039g0060 Nicotiana tabacum HOM05D006052 ORTHO05D007319 6.8e-34 147.9 81 82.7
PGR102G0387 Punica granatum HOM05D006052 ORTHO05D007319 6.8e-34 147.9 84 79.8
Sed0023726 Sechium edule HOM05D006052 ORTHO05D007319 8.9e-34 147.5 89 77.5
CsaV3_7G033550 Cucumis sativus L. HOM05D006052 ORTHO05D007319 1.2e-33 147.1 84 79.8
Peaxi162Scf00038g00824 Petunia axillaris HOM05D006052 ORTHO05D007319 1.2e-33 147.1 81 80.2
Solyc03g120820.4 Solanum lycopersicum HOM05D006052 ORTHO05D007319 1.2e-33 147.1 81 81.5
PGSC0003DMG402002538 Solanum tuberosum HOM05D006052 ORTHO05D007319 1.2e-33 147.1 81 81.5
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.5e-33 146.7 86 77.9
PSO782G5494 Papaver somniferum HOM05D006052 ORTHO05D007319 2.0e-33 146.4 81 82.7
Sc15g0001990 Simmondsia chinensis HOM05D006052 ORTHO05D007319 2.0e-33 146.4 89 73.0
MD17G1187600 Malus domestica HOM05D006052 ORTHO05D007319 2.6e-33 146.0 93 76.3
Nitab4.5_0007758g0100 Nicotiana tabacum HOM05D006052 ORTHO05D007319 2.6e-33 146.0 81 80.2
Actinidia39148 Actinidia chinensis HOM05D006052 ORTHO05D007319 3.4e-33 145.6 93 71.0
Eucgr.E01716 Eucalyptus grandis HOM05D006052 ORTHO05D007319 3.4e-33 145.6 88 72.7
CANSAT56G3932 Cannabis sativa HOM05D006052 ORTHO05D007319 4.4e-33 145.2 82 80.5
Solyc12g044380.3 Solanum lycopersicum HOM05D006052 ORTHO05D007319 4.4e-33 145.2 81 81.5
Sopen12g022650 Solanum pennellii HOM05D006052 ORTHO05D007319 4.4e-33 145.2 81 81.5
PGSC0003DMG400026453 Solanum tuberosum HOM05D006052 ORTHO05D007319 4.4e-33 145.2 81 81.5
Migut.I00924 Erythranthe guttata HOM05D006052 ORTHO05D007319 5.8e-33 144.8 92 75.0
HanXRQChr16g0501261 Helianthus annuus HOM05D006052 ORTHO05D007319 5.8e-33 144.8 79 84.8
EL10Ac9g22109 Beta vulgaris HOM05D006052 ORTHO05D007319 7.5e-33 144.4 90 72.2
Thhalv10019223m.g Eutrema salsugineum HOM05D006052 ORTHO05D007319 9.8e-33 144.1 95 67.4
Carub.0002s1643 Capsella rubella HOM05D006052 ORTHO05D007319 1.3e-32 143.7 89 70.8
CAN.G203.53 Capsicum annuum HOM05D006052 ORTHO05D007319 1.3e-32 143.7 86 75.6
GSVIVG01017036001 Vitis vinifera HOM05D006052 ORTHO05D007319 1.3e-32 143.7 93 71.0
MSTRG.22652 Avicennia marina HOM05D006052 ORTHO05D007319 1.7e-32 143.3 85 76.5
BcaB03g14752 Brassica carinata HOM05D006052 ORTHO05D007319 2.2e-32 142.9 89 70.8
Ciclev10026826m.g Citrus clementina HOM05D006052 ORTHO05D007319 2.2e-32 142.9 85 76.5
ECA232G3158 Erigeron canadensis HOM05D006052 ORTHO05D007319 2.9e-32 142.5 79 83.5
AL2G28930 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 3.7e-32 142.1 89 69.7
AT1G66590 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 3.7e-32 142.1 89 69.7
AT1G69750 Arabidopsis thaliana HOM05D006052 ORTHO05D007319 3.7e-32 142.1 89 69.7
HanXRQChr02g0032361 Helianthus annuus HOM05D006052 ORTHO05D007319 3.7e-32 142.1 91 76.9
BcaB03g15501 Brassica carinata HOM05D006052 ORTHO05D007319 4.9e-32 141.7 79 78.5
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 4.9e-32 141.7 104 69.2
FAN14G5158 Fragaria x ananassa HOM05D002582 ORTHO05D002781 6.4e-32 141.4 93 75.3
Rhsim12G0201800 Rhododendron simsii HOM05D006052 ORTHO05D007319 6.4e-32 141.4 112 62.5
Sp5g24870 Schrenkiella parvula HOM05D006052 ORTHO05D007319 1.1e-31 140.6 79 77.2
SGA_v2.0_scaffold69G23334 Striga asiatica HOM05D006052 ORTHO05D007319 1.1e-31 140.6 100 67.0
FAN02G3299 Fragaria x ananassa HOM05D006052 ORTHO05D007319 1.4e-31 140.2 83 78.3
arahy.Tifrunner.gnm1.ann1.69I5GX Arachis hypogaea HOM05D006052 ORTHO05D007319 1.9e-31 139.8 89 73.0
arahy.Tifrunner.gnm1.ann1.NZ5FDW Arachis hypogaea HOM05D006052 ORTHO05D007319 1.9e-31 139.8 89 73.0
arahy.Tifrunner.gnm1.ann1.S0BGA2 Arachis hypogaea HOM05D006052 ORTHO05D007319 1.9e-31 139.8 89 73.0
A07p36160 Brassica napus HOM05D006052 ORTHO05D007319 1.9e-31 139.8 77 79.2
C06p43560 Brassica napus HOM05D006052 ORTHO05D007319 1.9e-31 139.8 77 79.2
BolC6t39428H Brassica oleracea HOM05D006052 ORTHO05D007319 1.9e-31 139.8 77 79.2
BraA07t31192Z Brassica rapa HOM05D006052 ORTHO05D007319 1.9e-31 139.8 77 79.2
Phvul.010G146800 Phaseolus vulgaris HOM05D006052 ORTHO05D007319 2.4e-31 139.4 87 73.6
TWI12G0943 Tripterygium wilfordii HOM05D006052 ORTHO05D007319 2.4e-31 139.4 93 68.8
unitig_748.g8097 Utricularia gibba HOM05D003052 ORTHO05D007319 2.4e-31 139.4 82 76.8
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 7.0e-31 137.9 87 77.0
CARHR062820 Cardamine hirsuta HOM05D006052 ORTHO05D007319 9.2e-31 137.5 76 77.6
Glyma.07G017500 Glycine max HOM05D006052 ORTHO05D007319 1.2e-30 137.1 87 72.4
RcHm_v2.0_Chr2g0139621 Rosa chinensis HOM05D006052 ORTHO05D007319 1.2e-30 137.1 83 77.1
AL1G38650 Arabidopsis lyrata HOM05D006052 ORTHO05D007319 1.6e-30 136.7 85 70.6
VMungo1309G2952 Vigna mungo HOM05D006052 ORTHO05D007319 1.6e-30 136.7 87 75.9
Lj3g0026702 Lotus japonicus HOM05D006052 ORTHO05D007319 2.1e-30 136.3 79 75.9
BcaC03g15114 Brassica carinata HOM05D006052 ORTHO05D007319 2.7e-30 136.0 83 69.9
BolC2t08748H Brassica oleracea HOM05D006052 ORTHO05D007319 2.7e-30 136.0 83 69.9
AUR62031876 Chenopodium quinoa HOM05D006052 ORTHO05D007319 3.5e-30 135.6 84 72.6
THA.LOC104800715 Tarenaya hassleriana HOM05D006052 ORTHO05D007319 3.5e-30 135.6 78 75.6
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 6.0e-30 134.8 89 69.7
Glyma.08G202700 Glycine max HOM05D006052 ORTHO05D007319 7.8e-30 134.4 87 71.3
Lalb_Chr01g0013101 Lupinus albus HOM05D006052 ORTHO05D007319 7.8e-30 134.4 78 74.4
Lalb_Chr01g0013121 Lupinus albus HOM05D006052 ORTHO05D007319 7.8e-30 134.4 78 74.4
AUR62022170 Chenopodium quinoa HOM05D006052 ORTHO05D007319 1.3e-29 133.7 84 71.4
BraA07t30774Z Brassica rapa HOM05D006052 ORTHO05D007319 1.7e-29 133.3 98 61.2
Medtr8g013760 Medicago truncatula HOM05D006052 ORTHO05D007319 3.0e-29 132.5 88 70.5
A07p31390 Brassica napus HOM05D006052 ORTHO05D007319 3.9e-29 132.1 86 67.4
TPR.G14815 Trifolium pratense HOM05D006052 ORTHO05D007319 6.6e-29 131.3 83 68.7
Mapoly0075s0024 Marchantia polymorpha HOM05D006052 ORTHO05D007319 8.6e-29 131.0 78 75.6
Medtr3g112340 Medicago truncatula HOM05D006052 ORTHO05D007319 1.5e-28 130.2 79 73.4
SMO271G0187 Selaginella moellendorffii HOM05D006052 ORTHO05D007319 1.9e-28 129.8 85 65.9
C02p26750 Brassica napus HOM05D006052 ORTHO05D007319 3.3e-28 129.0 90 64.4
Aa31LG7G8230 Aethionema arabicum HOM05D006052 ORTHO05D007319 4.3e-28 128.6 76 73.7
QL05p021035 Quercus lobata HOM05D006052 ORTHO05D007319 7.3e-28 127.9 113 58.4
QL05p020889 Quercus lobata HOM05D006052 ORTHO05D007319 5.2e-26 121.7 81 69.1
SEGI_14426 Sequoiadendron giganteum HOM05D006052 ORTHO05D007319 6.8e-26 121.3 72 76.4
Pp3c14_6840 Physcomitrium patens HOM05D006052 ORTHO05D007319 4.4e-25 118.6 79 68.4
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 4.9e-24 115.2 85 62.4
SalBow6G3458 Salvia bowleyana HOM05D006052 ORTHO05D007319 1.1e-23 114.0 66 75.8
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 1.9e-23 113.2 65 76.9
AagrBONN_evm.TU.Sc2ySwM_344.4288 Anthoceros agrestis HOM05D006052 ORTHO05D007319 2.4e-23 112.8 79 63.3
CBR_g27938 Chara braunii HOM05D006052 ORTHO05D007319 7.1e-23 111.3 85 58.8
Psat4g197560 Pisum sativum HOM05D006052 ORTHO05D007319 9.2e-23 110.9 66 72.7
Atru.ctg114.13 Acer truncatum HOM05D006052 ORTHO05D007319 2.5e-20 102.8 66 66.7
BraA02t06670Z Brassica rapa HOM05D006052 ORTHO05D007319 9.5e-20 100.9 63 66.7
RcHm_v2.0_Chr5g0082611 Rosa chinensis HOM05D006052 ORTHO05D007319 9.5e-20 100.9 63 69.8
MD09G1206900 Malus domestica HOM05D006052 ORTHO05D007319 1.6e-19 100.1 98 53.1
A02p16100 Brassica napus HOM05D006052 ORTHO05D007319 2.8e-19 99.4 64 65.6
Nitab4.5_0001315g0290 Nicotiana tabacum HOM05D006052 ORTHO05D007319 6.2e-19 98.2 68 67.6
RcHm_v2.0_Chr5g0082321 Rosa chinensis HOM05D006052 ORTHO05D007319 1.8e-18 96.7 63 68.3
Nitab4.5_0008606g0020 Nicotiana tabacum HOM05D006052 ORTHO05D007319 5.2e-18 95.1 52 78.8
RcHm_v2.0_Chr4g0404221 Rosa chinensis HOM05D006052 ORTHO05D007319 5.2e-18 95.1 62 69.4
MELO3C024266.2 Cucumis melo HOM05D006052 ORTHO05D007319 2.0e-17 93.2 57 75.4
Lsat_1_v5_gn_1_34740 Lactuca sativa HOM05D006052 ORTHO05D007319 2.4e-15 86.3 56 73.2
Cre10.g454550 Chlamydomonas reinhardtii HOM05D006052 ORTHO05D007319 3.2e-15 85.9 73 54.8
PRCOL_00001792 Prasinoderma coloniale HOM05D006052 ORTHO05D007319 1.2e-14 84.0 78 51.3
Cfa026674 Carpinus fangiana HOM05D006052 ORTHO05D007319 1.0e-13 80.9 80 52.5
vmacro16174 Vaccinium macrocarpon HOM05D006052 ORTHO05D007319 1.7e-13 80.1 57 64.9
Manes.11G036000 Manihot esculenta HOM05D006052 ORTHO05D007319 3.9e-13 79.0 61 60.7
MCO15G075 Micromonas commoda HOM05D006052 ORTHO05D007319 6.6e-13 78.2 70 50.0
Nn2g12137 Nelumbo nucifera HOM05D006052 ORTHO05D007319 2.5e-12 76.3 49 71.4
Sp2g00570 Schrenkiella parvula HOM05D006052 ORTHO05D007319 3.3e-12 75.9 46 73.9
TPR.G20406 Trifolium pratense HOM05D006052 ORTHO05D007319 1.8e-10 70.1 33 84.8
CBR_g29697 Chara braunii HOM05D035488 ORTHO05D007319 6.4e-08 61.6 50 50.0


User provided reference genes

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