Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.0e-103 378.3 211 100.0
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 6.0e-99 364.4 211 95.7
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 8.4e-53 211.1 187 65.2
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.2e-52 209.1 181 66.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 4.2e-52 208.8 182 65.4
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 5.5e-52 208.4 181 66.3
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.2e-51 207.2 158 72.2
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.6e-51 206.8 175 66.3
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.5e-51 205.7 170 68.2
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 4.6e-51 205.3 169 65.7
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 7.9e-51 204.5 181 64.6
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.0e-50 204.1 194 60.8
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.0e-50 204.1 213 60.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.3e-50 203.0 168 66.1
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.3e-50 203.0 162 68.5
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 3.0e-50 202.6 201 59.7
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 3.0e-50 202.6 179 64.8
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 3.9e-50 202.2 167 67.1
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 5.1e-50 201.8 163 66.9
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 5.1e-50 201.8 147 72.8
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 6.7e-50 201.4 179 64.2
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 8.7e-50 201.1 169 67.5
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 8.7e-50 201.1 169 63.3
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 8.7e-50 201.1 169 63.3
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 8.7e-50 201.1 169 63.3
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.5e-49 200.3 190 57.9
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.5e-49 200.3 212 58.0
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.5e-49 200.3 150 70.7
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.9e-49 199.9 202 56.9
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.9e-49 199.9 161 67.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.5e-49 199.5 171 65.5
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 3.3e-49 199.1 169 66.3
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 4.3e-49 198.7 170 65.9
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 5.7e-49 198.4 203 57.6
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 5.7e-49 198.4 176 62.5
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 7.4e-49 198.0 145 71.0
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 9.6e-49 197.6 145 72.4
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.3e-48 197.2 167 64.7
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 3.7e-48 195.7 189 60.8
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 3.7e-48 195.7 205 57.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.8e-48 195.3 169 65.7
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.2e-48 194.9 150 68.7
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 8.2e-48 194.5 176 61.4
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.1e-47 194.1 176 60.2
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.8e-47 193.4 171 64.3
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.8e-47 193.4 170 62.4
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 2.4e-47 193.0 145 71.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 2.4e-47 193.0 145 71.0
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 4.1e-47 192.2 216 54.2
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 4.1e-47 192.2 170 64.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 5.3e-47 191.8 185 58.4
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 5.3e-47 191.8 145 71.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 6.9e-47 191.4 212 55.7
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 6.9e-47 191.4 202 56.9
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 9.0e-47 191.0 160 64.4
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 9.0e-47 191.0 160 64.4
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.2e-46 190.7 150 66.7
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.5e-46 190.3 192 58.9
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.5e-46 190.3 207 55.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 2.0e-46 189.9 161 65.2
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.6e-46 189.5 174 60.9
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.6e-46 189.5 220 54.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.4e-46 189.1 220 55.5
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.4e-46 189.1 220 55.5
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 3.4e-46 189.1 172 62.2
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 3.4e-46 189.1 170 60.6
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 5.8e-46 188.3 207 54.6
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 5.8e-46 188.3 164 65.2
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 5.8e-46 188.3 145 68.3
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 7.6e-46 188.0 147 66.7
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.3e-45 187.2 215 54.4
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.3e-45 187.2 211 54.0
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.3e-45 187.2 218 52.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.7e-45 186.8 216 53.2
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.9e-45 186.0 160 63.1
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.8e-45 185.7 170 61.8
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 6.5e-45 184.9 198 57.1
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 8.4e-45 184.5 216 52.8
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 8.4e-45 184.5 208 53.8
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.4e-44 183.7 150 66.7
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.9e-44 183.3 147 70.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.9e-44 183.3 189 60.8
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 4.2e-44 182.2 134 70.1
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 5.5e-44 181.8 226 50.0
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 5.5e-44 181.8 230 50.0
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 9.3e-44 181.0 163 59.5
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.1e-43 179.9 195 57.9
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 3.5e-43 179.1 171 57.9
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 3.5e-43 179.1 206 56.8
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 3.5e-43 179.1 145 66.2
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 4.6e-43 178.7 223 52.9
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 6.1e-43 178.3 215 53.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.1e-43 178.3 213 55.4
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 7.9e-43 177.9 159 59.7
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.0e-42 177.6 206 56.8
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.0e-42 177.6 153 61.4
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.0e-42 176.0 226 49.6
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 5.1e-42 175.3 214 50.5
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 6.7e-42 174.9 178 56.2
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 3.3e-41 172.6 190 53.2
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 5.7e-41 171.8 200 53.5
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.4e-39 166.4 167 58.7
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 3.1e-39 166.0 243 46.5
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 4.1e-39 165.6 215 49.3
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.0e-37 161.0 202 50.0
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.9e-37 159.5 145 64.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.4e-34 150.6 124 68.5
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.0e-33 146.7 140 60.0
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.8e-31 140.2 128 59.4
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 3.1e-31 139.4 125 67.2
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.0e-30 136.7 128 58.6
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.4e-30 136.0 192 44.8
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.1e-28 131.0 178 45.5
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.5e-28 129.8 86 75.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.7e-27 126.3 214 40.7
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 4.7e-27 125.6 125 60.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 7.9e-27 124.8 117 59.8
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.0e-26 124.4 160 49.4
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.0e-25 120.2 172 43.0
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.7e-21 107.1 104 53.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.4e-18 97.4 75 64.0
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.5e-17 91.7 106 48.1
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 6.3e-16 88.6 156 37.8


User provided reference genes

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