Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024002 Vanilla planifolia HOM05D004423 ORTHO05D005464 2.6e-200 701.8 355 100.0
HPP92_023981 Vanilla planifolia HOM05D004423 ORTHO05D005464 1.7e-186 656.0 411 84.2
Gohir.A01G171600 Gossypium hirsutum HOM05D004423 ORTHO05D005464 3.0e-71 273.1 426 40.4
Hma1.2p1_0032F.1_g019020 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 6.8e-71 271.9 412 42.0
Dinv41903 Davidia involucrata HOM05D004423 ORTHO05D005464 8.8e-71 271.6 432 41.0
QL11p053191 Quercus lobata HOM05D004423 ORTHO05D005464 1.5e-70 270.8 427 41.9
Nn7g38050 Nelumbo nucifera HOM05D004423 ORTHO05D005464 2.0e-70 270.4 432 41.0
Gohir.D01G162500 Gossypium hirsutum HOM05D004423 ORTHO05D005464 1.7e-69 267.3 426 39.9
Gorai.002G201600 Gossypium raimondii HOM05D004423 ORTHO05D005464 3.7e-69 266.2 426 39.9
Actinidia18027 Actinidia chinensis HOM05D004423 ORTHO05D005464 1.1e-68 264.6 424 40.1
MBI01_g09373_MAGBIO Magnolia biondii HOM05D004423 ORTHO05D005464 3.1e-68 263.1 432 39.8
Aqoxy2G04085 Aquilegia oxysepala HOM05D004423 ORTHO05D005464 9.1e-68 261.5 413 41.2
TAR376G0159 Trochodendron aralioides HOM05D004423 ORTHO05D005464 1.6e-67 260.8 426 40.6
Manes.11G100750 Manihot esculenta HOM05D004423 ORTHO05D005464 5.9e-67 258.8 423 37.1
Potri.009G139900 Populus trichocarpa HOM05D004423 ORTHO05D005464 5.9e-67 258.8 424 39.6
Actinidia20541 Actinidia chinensis HOM05D004423 ORTHO05D005464 1.0e-66 258.1 426 39.4
Aa31LG6G16860 Aethionema arabicum HOM05D004423 ORTHO05D005464 2.3e-66 256.9 395 41.3
Carub.0007s0033 Capsella rubella HOM05D004423 ORTHO05D005464 2.9e-66 256.5 389 42.2
PGR042G3292 Punica granatum HOM05D004423 ORTHO05D005464 3.8e-66 256.1 422 41.5
Thecc.02G052800 Theobroma cacao HOM05D004423 ORTHO05D005464 3.8e-66 256.1 428 39.5
Eucgr.G01811 Eucalyptus grandis HOM05D004423 ORTHO05D005464 5.0e-66 255.8 424 38.7
vmacro02301 Vaccinium macrocarpon HOM05D004423 ORTHO05D005464 6.6e-66 255.4 423 38.1
CARHR294170 Cardamine hirsuta HOM05D004423 ORTHO05D005464 1.1e-65 254.6 392 41.3
Rhsim11G0195000 Rhododendron simsii HOM05D004423 ORTHO05D005464 3.3e-65 253.1 426 38.7
AL7G10310 Arabidopsis lyrata HOM05D004423 ORTHO05D005464 9.5e-65 251.5 389 40.9
Thhalv10024216m.g Eutrema salsugineum HOM05D004423 ORTHO05D005464 9.5e-65 251.5 396 40.7
GSVIVG01023952001 Vitis vinifera HOM05D004423 ORTHO05D005464 2.8e-64 250.0 419 38.9
TWI75G0836 Tripterygium wilfordii HOM05D004423 ORTHO05D005464 4.7e-64 249.2 425 39.8
AT4G38440 Arabidopsis thaliana HOM05D004423 ORTHO05D005464 6.1e-64 248.8 394 40.4
Cfa005315 Carpinus fangiana HOM05D004423 ORTHO05D005464 6.1e-64 248.8 425 38.8
Sp7g37340 Schrenkiella parvula HOM05D004423 ORTHO05D005464 6.1e-64 248.8 390 39.2
Haze_02070 Corylus avellana HOM05D004423 ORTHO05D005464 8.0e-64 248.4 442 38.2
Prupe.8G172300 Prunus persica HOM05D004423 ORTHO05D005464 8.0e-64 248.4 418 38.0
Duzib132G0529 Durio zibethinus HOM05D004423 ORTHO05D005464 1.0e-63 248.1 422 38.9
Lj5C174T8 Lonicera japonica HOM05D004423 ORTHO05D005464 1.0e-63 248.1 395 38.7
Ah.01g008070 Amaranthus hybridus HOM05D004423 ORTHO05D005464 1.8e-63 247.3 427 38.4
Glyma.02G121200 Glycine max HOM05D004423 ORTHO05D005464 6.8e-63 245.4 417 38.1
Ciclev10027678m.g Citrus clementina HOM05D004423 ORTHO05D005464 1.2e-62 244.6 420 39.0
PSO782G0263 Papaver somniferum HOM05D004423 ORTHO05D005464 1.2e-62 244.6 424 38.4
Lalb_Chr17g0341361 Lupinus albus HOM05D004423 ORTHO05D005464 2.6e-62 243.4 415 38.8
PSO063G1777 Papaver somniferum HOM05D004423 ORTHO05D005464 3.4e-62 243.0 424 38.7
ATR0322G068 Amborella trichopoda HOM05D004423 ORTHO05D005464 4.4e-62 242.7 408 39.0
Glyma.01G063600 Glycine max HOM05D004423 ORTHO05D005464 4.4e-62 242.7 419 37.9
Sabra09G0108500 Salix brachista HOM05D004423 ORTHO05D005464 7.5e-62 241.9 421 38.2
Hund06453 Selenicereus undatus HOM05D004423 ORTHO05D005464 9.8e-62 241.5 428 37.9
AUR62009995 Chenopodium quinoa HOM05D004423 ORTHO05D005464 1.7e-61 240.7 427 37.9
Lj2g0017242 Lotus japonicus HOM05D004423 ORTHO05D005464 1.7e-61 240.7 414 36.7
MD05G1128200 Malus domestica HOM05D004423 ORTHO05D005464 1.7e-61 240.7 417 38.4
MD10G1131500 Malus domestica HOM05D004423 ORTHO05D005464 1.7e-61 240.7 415 37.6
VMungo1215G3113 Vigna mungo HOM05D004423 ORTHO05D005464 3.7e-61 239.6 415 37.3
Ca_05030_v3 Cicer arietinum L. HOM05D004423 ORTHO05D005464 1.1e-60 238.0 415 38.3
Medtr1g031840 Medicago truncatula HOM05D004423 ORTHO05D005464 1.1e-60 238.0 419 37.7
FvH4_2g15920 Fragaria vesca HOM05D004423 ORTHO05D005464 1.8e-60 237.3 417 37.2
Os06g0574400 Oryza sativa ssp. japonica HOM05D004423 ORTHO05D005464 1.8e-60 237.3 402 37.6
Oeu045082.1 Olea europaea HOM05D004423 ORTHO05D005464 2.4e-60 236.9 395 38.5
Psat2g133680 Pisum sativum HOM05D004423 ORTHO05D005464 3.2e-60 236.5 411 37.5
RcHm_v2.0_Chr6g0279371 Rosa chinensis HOM05D004423 ORTHO05D005464 3.2e-60 236.5 420 37.4
Zm00001eb385260 Zea mays HOM05D004423 ORTHO05D005464 3.2e-60 236.5 405 37.5
CANSAT25G0289 Cannabis sativa HOM05D004423 ORTHO05D005464 4.1e-60 236.1 423 36.9
FAN20G1295 Fragaria x ananassa HOM05D004423 ORTHO05D005464 5.4e-60 235.7 417 36.5
FAN24G1532 Fragaria x ananassa HOM05D004423 ORTHO05D005464 7.0e-60 235.3 420 38.1
Sopen01g053960 Solanum pennellii HOM05D004423 ORTHO05D005464 7.0e-60 235.3 397 38.3
FAN15G2581 Fragaria x ananassa HOM05D004423 ORTHO05D005464 9.2e-60 235.0 418 37.3
HanXRQChr17g0543821 Helianthus annuus HOM05D004423 ORTHO05D005464 9.2e-60 235.0 402 39.3
THA.LOC104824748 Tarenaya hassleriana HOM05D004423 ORTHO05D005464 9.2e-60 235.0 393 38.7
CsaV3_6G012570 Cucumis sativus L. HOM05D004423 ORTHO05D005464 1.6e-59 234.2 431 36.2
Solyc01g111910.3 Solanum lycopersicum HOM05D004423 ORTHO05D005464 1.6e-59 234.2 397 38.3
DCAR_022414 Daucus carota HOM05D004423 ORTHO05D005464 2.7e-59 233.4 413 38.5
Medtr5g046240 Medicago truncatula HOM05D004423 ORTHO05D005464 2.7e-59 233.4 419 37.5
ECA246G1499 Erigeron canadensis HOM05D004423 ORTHO05D005464 5.9e-59 232.3 396 39.1
Sc18g0006140 Simmondsia chinensis HOM05D004423 ORTHO05D005464 1.0e-58 231.5 425 38.4
C04p46880 Brassica napus HOM05D004423 ORTHO05D005464 5.0e-58 229.2 403 38.2
BolC4t26280H Brassica oleracea HOM05D004423 ORTHO05D005464 5.0e-58 229.2 403 38.2
Phvul.003G039700 Phaseolus vulgaris HOM05D004423 ORTHO05D005464 8.6e-58 228.4 415 36.9
ClCG02G011090 Citrullus lanatus HOM05D004423 ORTHO05D005464 1.1e-57 228.0 431 35.5
Sed0008640 Sechium edule HOM05D004423 ORTHO05D005464 1.5e-57 227.6 425 34.6
A04p13130 Brassica napus HOM05D004423 ORTHO05D005464 1.9e-57 227.3 404 38.9
arahy.Tifrunner.gnm1.ann1.YN7PRK Arachis hypogaea HOM05D004423 ORTHO05D005464 2.5e-57 226.9 400 38.0
CAN.G1235.36 Capsicum annuum HOM05D004423 ORTHO05D005464 2.5e-57 226.9 389 37.8
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 2.5e-57 226.9 395 36.2
unitig_21.g20846 Utricularia gibba HOM05D004423 ORTHO05D005464 2.5e-57 226.9 405 36.5
TPR.G38573 Trifolium pratense HOM05D004423 ORTHO05D005464 3.3e-57 226.5 415 37.1
MELO3C013664.2 Cucumis melo HOM05D004423 ORTHO05D005464 4.3e-57 226.1 431 35.5
EL10Ac9g21318 Beta vulgaris HOM05D004423 ORTHO05D005464 1.2e-56 224.6 419 36.5
COL.COLO4_18006 Corchorus olitorius HOM05D004423 ORTHO05D005464 2.1e-56 223.8 252 48.4
FAN27G3078 Fragaria x ananassa HOM05D004423 ORTHO05D005464 2.1e-56 223.8 384 38.0
Nitab4.5_0003679g0020 Nicotiana tabacum HOM05D004423 ORTHO05D005464 2.8e-56 223.4 396 37.6
SalBow1G3590 Salvia bowleyana HOM05D004423 ORTHO05D005464 2.8e-56 223.4 399 36.3
Haze_02078 Corylus avellana HOM05D004423 ORTHO05D005464 3.6e-56 223.0 403 38.5
Hma1.2p1_0032F.1_g019040 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 6.1e-56 222.2 291 45.7
BraA04t16972Z Brassica rapa HOM05D004423 ORTHO05D005464 1.0e-55 221.5 405 37.8
Cc00_g02430 Coffea canephora HOM05D004423 ORTHO05D005464 1.5e-54 217.6 407 35.9
Peaxi162Scf00362g00356 Petunia axillaris HOM05D004423 ORTHO05D005464 2.6e-54 216.9 400 36.2
Migut.B00041 Erythranthe guttata HOM05D004423 ORTHO05D005464 5.8e-54 215.7 390 37.9
AUR62012983 Chenopodium quinoa HOM05D004423 ORTHO05D005464 9.8e-54 214.9 420 36.7
BcaB06g27461 Brassica carinata HOM05D004423 ORTHO05D005464 7.8e-51 205.3 383 36.6
SHI08411 Sapria himalayana HOM05D004423 ORTHO05D005464 1.6e-48 197.6 399 34.6
SHI46553 Sapria himalayana HOM05D004423 ORTHO05D005464 3.2e-44 183.3 317 37.5
arahy.Tifrunner.gnm1.ann1.CJIC4D Arachis hypogaea HOM05D004423 ORTHO05D005464 8.1e-40 168.7 579 27.1
SEGI_28605 Sequoiadendron giganteum HOM05D004423 ORTHO05D005464 2.2e-37 160.6 444 31.1
CDE09G0751 Ceratophyllum demersum HOM05D004423 ORTHO05D005464 5.1e-34 149.4 198 44.9
Eucgr.E03994 Eucalyptus grandis HOM05D004423 ORTHO05D005464 1.1e-31 141.7 295 35.6
Mapoly0006s0149 Marchantia polymorpha HOM05D004423 ORTHO05D005464 2.6e-30 137.1 425 29.9
SGA_v2.0_scaffold58G20334 Striga asiatica HOM05D004423 ORTHO05D005464 1.3e-29 134.8 247 37.7
Atru.chr5.3471 Acer truncatum HOM05D004423 ORTHO05D005464 8.4e-29 132.1 298 35.2
Cpa.g.sc20.132 Carica papaya HOM05D004423 ORTHO05D005464 7.1e-28 129.0 261 35.6
CiPaw.05G087000 Carya illinoinensis HOM05D004423 ORTHO05D005464 1.6e-27 127.9 297 33.0
Pp3c6_25040 Physcomitrium patens HOM05D004423 ORTHO05D005464 1.6e-27 127.9 419 28.4
SalBow1G2566 Salvia bowleyana HOM05D004423 ORTHO05D000248 4.3e-25 119.8 273 32.2
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 1.3e-24 118.2 153 45.1
Nitab4.5_0003603g0110 Nicotiana tabacum HOM05D004423 ORTHO05D005464 2.1e-24 117.5 126 46.8
Atru.chr5.3470 Acer truncatum HOM05D004423 ORTHO05D005464 1.1e-23 115.2 129 46.5
AagrBONN_evm.TU.Sc2ySwM_369.194 Anthoceros agrestis HOM05D004423 ORTHO05D005464 4.0e-23 113.2 349 28.4
SMO119G0387 Selaginella moellendorffii HOM05D004423 ORTHO05D005464 7.1e-20 102.4 327 28.7
Pp3c14_25290 Physcomitrium patens HOM05D004423 ORTHO05D005464 1.6e-19 101.3 415 22.4
Actinidia20527 Actinidia chinensis HOM05D004423 ORTHO05D005464 4.3e-17 93.2 246 33.3
ATR0796G217 Amborella trichopoda HOM05D004423 ORTHO05D005464 5.5e-12 76.3 108 40.7
ATR0316G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 7.1e-12 75.9 133 35.3
ATR0757G159 Amborella trichopoda HOM05D004423 ORTHO05D005464 9.3e-12 75.5 133 34.6
Medtr1g031850 Medicago truncatula HOM05D004423 ORTHO05D005464 1.2e-11 75.1 70 50.0
ATR0116G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.7e-11 73.9 133 33.8
ATR0045G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.8e-10 71.2 133 33.1
ATR1016G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.8e-10 71.2 127 35.4
ATR0049G066 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.3e-10 70.9 127 35.4
ATR0564G023 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.3e-10 70.9 136 34.6
Hma1.2p1_0032F.1_g019030 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 1.5e-09 68.2 87 42.5
ATR0757G178 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.5e-09 67.4 121 33.1
ATR0342G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.1e-08 64.3 127 33.9
ATR1002G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.8e-08 63.9 124 33.1
ATR0882G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 3.7e-08 63.5 127 33.9
ATR0733G014 Amborella trichopoda HOM05D004423 ORTHO05D005464 5.3e-07 59.7 92 38.0
CBR_g45642 Chara braunii HOM05D004423 ORTHO05D005464 7.6e-06 55.8 306 23.9


User provided reference genes

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