Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023988 Vanilla planifolia HOM05D004621 ORTHO05D005817 4.8e-85 317.8 157 100.0
HPP92_023996 Vanilla planifolia HOM05D004621 ORTHO05D005817 4.2e-81 304.7 157 96.2
GSVIVG01035427001 Vitis vinifera HOM05D004621 ORTHO05D005817 6.1e-40 167.9 151 57.0
Nn6g35569 Nelumbo nucifera HOM05D004621 ORTHO05D005817 1.8e-39 166.4 136 62.5
CDE08G0262 Ceratophyllum demersum HOM05D004621 ORTHO05D005817 3.0e-39 165.6 107 74.8
ATR0051G016 Amborella trichopoda HOM05D004621 ORTHO05D005817 6.7e-39 164.5 130 68.5
CsaV3_4G035890 Cucumis sativus L. HOM05D004621 ORTHO05D005817 6.7e-39 164.5 141 61.0
RcHm_v2.0_Chr6g0311441 Rosa chinensis HOM05D004621 ORTHO05D005817 6.7e-39 164.5 146 58.2
Os02g0217800 Oryza sativa ssp. japonica HOM05D004621 ORTHO05D005817 8.8e-39 164.1 109 72.5
Carub.0006s2397 Capsella rubella HOM05D004621 ORTHO05D005817 1.1e-38 163.7 159 57.9
Cfa017997 Carpinus fangiana HOM05D004621 ORTHO05D005817 1.5e-38 163.3 149 56.4
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 2.6e-38 162.5 114 72.8
Aqoxy2G03981 Aquilegia oxysepala HOM05D004621 ORTHO05D005817 5.7e-38 161.4 96 80.2
C09p06540 Brassica napus HOM05D004621 ORTHO05D005817 7.4e-38 161.0 121 67.8
ClCG05G018120 Citrullus lanatus HOM05D004621 ORTHO05D005817 9.7e-38 160.6 139 59.0
FvH4_2g31380 Fragaria vesca HOM05D004621 ORTHO05D005817 9.7e-38 160.6 146 58.2
FAN24G3059 Fragaria x ananassa HOM05D004621 ORTHO05D005817 9.7e-38 160.6 146 58.2
A09p05980 Brassica napus HOM05D004621 ORTHO05D005817 1.3e-37 160.2 121 66.9
Thhalv10004076m.g Eutrema salsugineum HOM05D004621 ORTHO05D005817 1.3e-37 160.2 121 66.9
Sed0025089 Sechium edule HOM05D004621 ORTHO05D005817 1.3e-37 160.2 132 62.9
Rhsim05G0135500 Rhododendron simsii HOM05D004621 ORTHO05D005817 1.7e-37 159.8 154 53.9
FAN27G1750 Fragaria x ananassa HOM05D004621 ORTHO05D005817 2.2e-37 159.5 146 57.5
QL02p000390 Quercus lobata HOM05D004621 ORTHO05D005817 2.2e-37 159.5 153 54.2
Sc09g0009990 Simmondsia chinensis HOM05D004621 ORTHO05D005817 2.2e-37 159.5 136 58.8
Haze_18137 Corylus avellana HOM05D004621 ORTHO05D005817 2.8e-37 159.1 161 53.4
AT5G26180 Arabidopsis thaliana HOM05D004621 ORTHO05D005817 3.7e-37 158.7 135 63.0
CARHR187480 Cardamine hirsuta HOM05D004621 ORTHO05D005817 3.7e-37 158.7 140 62.1
AL6G38190 Arabidopsis lyrata HOM05D004621 ORTHO05D005817 4.8e-37 158.3 153 58.8
Duzib168G0020 Durio zibethinus HOM05D004621 ORTHO05D005817 4.8e-37 158.3 136 59.6
TWI32G0723 Tripterygium wilfordii HOM05D004621 ORTHO05D005817 4.8e-37 158.3 107 72.0
BolC2t11942H Brassica oleracea HOM05D004621 ORTHO05D005817 6.3e-37 157.9 129 62.8
Aa31LG1G21020 Aethionema arabicum HOM05D004621 ORTHO05D005817 8.2e-37 157.5 103 73.8
FAN20G0813 Fragaria x ananassa HOM05D004621 ORTHO05D005817 1.1e-36 157.1 146 57.5
Manes.16G083500 Manihot esculenta HOM05D004621 ORTHO05D005817 1.1e-36 157.1 120 66.7
MELO3C016896.2 Cucumis melo HOM05D004621 ORTHO05D005817 1.4e-36 156.8 110 70.9
Sabra06G0173000 Salix brachista HOM05D004621 ORTHO05D005817 1.4e-36 156.8 96 79.2
AUR62009103 Chenopodium quinoa HOM05D004621 ORTHO05D005817 2.4e-36 156.0 131 58.0
BcaB04g19746 Brassica carinata HOM05D004621 ORTHO05D005817 3.1e-36 155.6 119 68.1
AUR62020569 Chenopodium quinoa HOM05D004621 ORTHO05D005817 3.1e-36 155.6 131 58.0
Dinv12465 Davidia involucrata HOM05D004621 ORTHO05D005817 3.1e-36 155.6 108 72.2
Sp2g21560 Schrenkiella parvula HOM05D004621 ORTHO05D005817 3.1e-36 155.6 116 67.2
Thecc.09G059300 Theobroma cacao HOM05D004621 ORTHO05D005817 3.1e-36 155.6 118 66.1
Hma1.2p1_0196F.1_g084950 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 4.1e-36 155.2 125 63.2
BcaB07g29951 Brassica carinata HOM05D004621 ORTHO05D005817 5.3e-36 154.8 129 62.8
C02p58840 Brassica napus HOM05D004621 ORTHO05D005817 5.3e-36 154.8 129 62.0
PSO210G1875 Papaver somniferum HOM05D004621 ORTHO05D005817 5.3e-36 154.8 100 77.0
CiPaw.16G067600 Carya illinoinensis HOM05D004621 ORTHO05D005817 7.0e-36 154.5 156 51.9
MD15G1053900 Malus domestica HOM05D004621 ORTHO05D005817 7.0e-36 154.5 138 58.7
Potri.006G224000 Populus trichocarpa HOM05D004621 ORTHO05D005817 7.0e-36 154.5 96 77.1
BcaC03g17845 Brassica carinata HOM05D004621 ORTHO05D005817 9.1e-36 154.1 129 61.2
PSO210G2988 Papaver somniferum HOM05D004621 ORTHO05D005817 9.1e-36 154.1 100 78.0
PGR031G3863 Punica granatum HOM05D004621 ORTHO05D005817 9.1e-36 154.1 103 71.8
A02p39240 Brassica napus HOM05D004621 ORTHO05D005817 1.2e-35 153.7 129 61.2
BraA02t08889Z Brassica rapa HOM05D004621 ORTHO05D005817 1.2e-35 153.7 129 61.2
BcaC04g23605 Brassica carinata HOM05D004621 ORTHO05D005817 1.6e-35 153.3 95 77.9
BolC9t53577H Brassica oleracea HOM05D004621 ORTHO05D005817 1.6e-35 153.3 95 77.9
Cpa.g.sc126.50 Carica papaya HOM05D004621 ORTHO05D005817 1.6e-35 153.3 102 71.6
ECA234G1492 Erigeron canadensis HOM05D004621 ORTHO05D005817 1.6e-35 153.3 104 70.2
Eucgr.C00676 Eucalyptus grandis HOM05D004621 ORTHO05D005817 1.6e-35 153.3 135 60.0
HanXRQChr10g0309801 Helianthus annuus HOM05D004621 ORTHO05D005817 2.6e-35 152.5 148 54.7
Ciclev10010180m.g Citrus clementina HOM05D004621 ORTHO05D005817 4.5e-35 151.8 142 58.5
Migut.A00101 Erythranthe guttata HOM05D004621 ORTHO05D005817 4.5e-35 151.8 137 56.9
Lsat_1_v5_gn_5_78680 Lactuca sativa HOM05D004621 ORTHO05D005817 4.5e-35 151.8 143 53.8
CANSAT21G1762 Cannabis sativa HOM05D004621 ORTHO05D005817 5.9e-35 151.4 114 64.0
Gorai.009G042200 Gossypium raimondii HOM05D004621 ORTHO05D005817 7.7e-35 151.0 100 71.0
COL.COLO4_21108 Corchorus olitorius HOM05D004621 ORTHO05D005817 1.0e-34 150.6 96 71.9
Atru.chr7.1890 Acer truncatum HOM05D004621 ORTHO05D005817 2.2e-34 149.4 119 66.4
Atru.chr7.1918 Acer truncatum HOM05D004621 ORTHO05D005817 2.2e-34 149.4 119 66.4
Gohir.A05G040100 Gossypium hirsutum HOM05D004621 ORTHO05D005817 2.9e-34 149.1 100 70.0
Gohir.D05G041600 Gossypium hirsutum HOM05D004621 ORTHO05D005817 3.8e-34 148.7 100 70.0
Prupe.1G407400 Prunus persica HOM05D004621 ORTHO05D005817 3.8e-34 148.7 145 57.9
SalBow4G1696 Salvia bowleyana HOM05D004621 ORTHO05D005817 6.5e-34 147.9 111 63.1
DCAR_007741 Daucus carota HOM05D004621 ORTHO05D005817 8.5e-34 147.5 97 73.2
Lj8A491G32 Lonicera japonica HOM05D004621 ORTHO05D005817 8.5e-34 147.5 95 72.6
Lj1g0023758 Lotus japonicus HOM05D004621 ORTHO05D005817 8.5e-34 147.5 141 52.5
CAN.G42.5 Capsicum annuum HOM05D004621 ORTHO05D005817 1.5e-33 146.7 96 71.9
Lalb_Chr11g0063251 Lupinus albus HOM05D004621 ORTHO05D005817 1.5e-33 146.7 155 49.7
PGSC0003DMG400008208 Solanum tuberosum HOM05D004621 ORTHO05D005817 1.5e-33 146.7 96 71.9
arahy.Tifrunner.gnm1.ann1.T7L0BR Arachis hypogaea HOM05D004621 ORTHO05D005817 2.5e-33 146.0 135 55.6
arahy.Tifrunner.gnm1.ann1.I8I12Q Arachis hypogaea HOM05D004621 ORTHO05D005817 4.2e-33 145.2 135 54.8
Cc08_g11070 Coffea canephora HOM05D004621 ORTHO05D005817 9.4e-33 144.1 109 66.1
Sopen08g017990 Solanum pennellii HOM05D004621 ORTHO05D005817 1.6e-32 143.3 96 69.8
Ca_15845_v3 Cicer arietinum L. HOM05D004621 ORTHO05D005817 2.7e-32 142.5 96 71.9
SEGI_04699 Sequoiadendron giganteum HOM05D004621 ORTHO05D005817 3.6e-32 142.1 120 60.0
unitig_88.g27672 Utricularia gibba HOM05D004621 ORTHO05D005817 3.6e-32 142.1 126 55.6
Medtr3g104760 Medicago truncatula HOM05D004621 ORTHO05D005817 6.1e-32 141.4 117 62.4
Psat5g035360 Pisum sativum HOM05D004621 ORTHO05D005817 6.1e-32 141.4 149 50.3
VMungo1309G3014 Vigna mungo HOM05D004621 ORTHO05D005817 6.1e-32 141.4 143 52.4
Ah.10g034040 Amaranthus hybridus HOM05D004621 ORTHO05D005817 1.4e-31 140.2 114 59.6
Solyc08g062560.4 Solanum lycopersicum HOM05D004621 ORTHO05D005817 1.4e-31 140.2 96 68.8
TPR.G3533 Trifolium pratense HOM05D004621 ORTHO05D005817 1.8e-31 139.8 117 61.5
MSTRG.25978 Avicennia marina HOM05D004621 ORTHO05D005817 3.0e-31 139.0 96 68.8
Phvul.009G080100 Phaseolus vulgaris HOM05D004621 ORTHO05D005817 3.0e-31 139.0 145 49.7
Glyma.06G054600 Glycine max HOM05D004621 ORTHO05D005817 5.2e-31 138.3 142 51.4
CBR_g41719 Chara braunii HOM05D004621 ORTHO05D005817 8.8e-31 137.5 105 61.0
Glyma.04G054300 Glycine max HOM05D004621 ORTHO05D005817 1.2e-30 137.1 146 50.7
Pp3c1_12750 Physcomitrium patens HOM05D004621 ORTHO05D005817 3.3e-30 135.6 100 66.0
SMO169G0045 Selaginella moellendorffii HOM05D004621 ORTHO05D005817 1.3e-29 133.7 99 65.7
EL10Ac2g03807 Beta vulgaris HOM05D004621 ORTHO05D005817 3.7e-29 132.1 128 57.8
Hund19431 Selenicereus undatus HOM05D004621 ORTHO05D005817 3.7e-29 132.1 148 50.7
Nitab4.5_0000286g0110 Nicotiana tabacum HOM05D004621 ORTHO05D005817 8.2e-29 131.0 118 60.2
Nitab4.5_0009148g0020 Nicotiana tabacum HOM05D004621 ORTHO05D005817 8.2e-29 131.0 118 61.0
SGA_v2.0_scaffold20G09183 Striga asiatica HOM05D004621 ORTHO05D005817 1.4e-28 130.2 105 61.9
Mapoly0057s0032 Marchantia polymorpha HOM05D004621 ORTHO05D005817 1.8e-28 129.8 105 63.8
Lj8A495T42 Lonicera japonica HOM05D004621 ORTHO05D005817 4.1e-28 128.6 85 69.4
Peaxi162Scf01253g00025 Petunia axillaris HOM05D004621 ORTHO05D005817 4.1e-28 128.6 105 64.8
Hma1.2p1_0196F.1_g084970 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 9.1e-28 127.5 124 53.2
MBI05_g23629_MAGBIO Magnolia biondii HOM05D004621 ORTHO05D005817 1.3e-26 123.6 73 80.8
THA.LOC104811228 Tarenaya hassleriana HOM05D004621 ORTHO05D005817 7.2e-25 117.9 83 69.9
Cre16.g647602 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D006241 5.2e-23 111.7 98 57.1
MCO11G750 Micromonas commoda HOM05D004621 ORTHO05D005817 2.0e-19 99.8 97 52.6
SHI18706 Sapria himalayana HOM05D004621 ORTHO05D005817 2.3e-15 86.3 85 51.8
PRCOL_00003600 Prasinoderma coloniale HOM05D004621 ORTHO05D005817 4.4e-14 82.0 130 38.5
AagrBONN_evm.TU.Sc2ySwM_228.3331 Anthoceros agrestis HOM05D004621 ORTHO05D005817 4.0e-07 58.9 39 69.2
BraA09t36240Z Brassica rapa HOM05D004621 ORTHO05D005817 4.0e-07 58.9 41 70.7


User provided reference genes

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