Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023983 Vanilla planifolia HOM05D004423 ORTHO05D005464 0.0e+00 1181.4 598 100.0
HPP92_024001 Vanilla planifolia HOM05D004423 ORTHO05D005464 1.8e-305 1052.0 596 91.8
Nn7g38050 Nelumbo nucifera HOM05D004423 ORTHO05D005464 6.4e-106 389.0 648 40.1
MBI01_g09373_MAGBIO Magnolia biondii HOM05D004423 ORTHO05D005464 2.5e-102 377.1 588 42.3
GSVIVG01023952001 Vitis vinifera HOM05D004423 ORTHO05D005464 5.6e-102 375.9 597 41.5
PSO063G1777 Papaver somniferum HOM05D004423 ORTHO05D005464 2.1e-101 374.0 575 42.8
TAR376G0159 Trochodendron aralioides HOM05D004423 ORTHO05D005464 2.1e-101 374.0 615 41.0
Aqoxy2G04085 Aquilegia oxysepala HOM05D004423 ORTHO05D005464 1.1e-100 371.7 585 39.5
Actinidia18027 Actinidia chinensis HOM05D004423 ORTHO05D005464 1.4e-100 371.3 630 41.1
Zm00001eb385260 Zea mays HOM05D004423 ORTHO05D005464 5.2e-100 369.4 546 44.0
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 2.6e-99 367.1 570 40.9
Sabra09G0108500 Salix brachista HOM05D004423 ORTHO05D005464 7.6e-99 365.5 633 40.4
Potri.009G139900 Populus trichocarpa HOM05D004423 ORTHO05D005464 9.9e-99 365.2 630 40.2
CDE09G0821 Ceratophyllum demersum HOM05D004423 ORTHO05D005464 6.4e-98 362.5 581 40.8
Oeu045082.1 Olea europaea HOM05D004423 ORTHO05D005464 8.4e-98 362.1 603 39.3
Actinidia20541 Actinidia chinensis HOM05D004423 ORTHO05D005464 1.1e-97 361.7 624 39.6
Cpa.g.sc20.132 Carica papaya HOM05D004423 ORTHO05D005464 1.9e-97 360.9 583 41.3
Lj2g0017242 Lotus japonicus HOM05D004423 ORTHO05D005464 7.1e-97 359.0 596 39.3
TPR.G38573 Trifolium pratense HOM05D004423 ORTHO05D005464 1.2e-96 358.2 581 38.6
vmacro02301 Vaccinium macrocarpon HOM05D004423 ORTHO05D005464 1.2e-96 358.2 623 38.2
Cfa005315 Carpinus fangiana HOM05D004423 ORTHO05D005464 1.6e-96 357.8 628 38.7
Glyma.02G121200 Glycine max HOM05D004423 ORTHO05D005464 3.9e-95 353.2 635 38.6
Haze_02070 Corylus avellana HOM05D004423 ORTHO05D005464 6.6e-95 352.4 670 38.1
Ca_05030_v3 Cicer arietinum L. HOM05D004423 ORTHO05D005464 8.7e-95 352.1 578 38.9
Manes.11G100750 Manihot esculenta HOM05D004423 ORTHO05D005464 1.6e-93 347.8 665 36.7
Sopen01g053960 Solanum pennellii HOM05D004423 ORTHO05D005464 1.6e-93 347.8 601 38.6
HanXRQChr17g0543821 Helianthus annuus HOM05D004423 ORTHO05D005464 1.1e-92 345.1 603 38.6
Lalb_Chr17g0341361 Lupinus albus HOM05D004423 ORTHO05D005464 1.1e-92 345.1 607 37.9
COL.COLO4_18006 Corchorus olitorius HOM05D004423 ORTHO05D005464 1.4e-92 344.7 662 36.9
CANSAT25G0289 Cannabis sativa HOM05D004423 ORTHO05D005464 1.8e-92 344.4 617 39.9
Solyc01g111910.3 Solanum lycopersicum HOM05D004423 ORTHO05D005464 2.4e-92 344.0 610 38.4
Phvul.003G039700 Phaseolus vulgaris HOM05D004423 ORTHO05D005464 3.1e-92 343.6 596 38.8
Thecc.02G052800 Theobroma cacao HOM05D004423 ORTHO05D005464 3.1e-92 343.6 663 36.8
Cc00_g02430 Coffea canephora HOM05D004423 ORTHO05D005464 6.9e-92 342.4 562 40.7
SalBow1G3590 Salvia bowleyana HOM05D004423 ORTHO05D005464 9.0e-92 342.0 616 37.8
Rhsim11G0195000 Rhododendron simsii HOM05D004423 ORTHO05D005464 1.5e-91 341.3 624 37.8
THA.LOC104824748 Tarenaya hassleriana HOM05D004423 ORTHO05D005464 2.0e-91 340.9 610 37.9
Duzib132G0529 Durio zibethinus HOM05D004423 ORTHO05D005464 5.8e-91 339.3 661 38.3
ECA246G1499 Erigeron canadensis HOM05D004423 ORTHO05D005464 5.8e-91 339.3 602 40.5
Hma1.2p1_0032F.1_g019020 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 5.8e-91 339.3 650 37.5
CARHR294170 Cardamine hirsuta HOM05D004423 ORTHO05D005464 1.3e-90 338.2 574 38.3
Gorai.002G201600 Gossypium raimondii HOM05D004423 ORTHO05D005464 1.7e-90 337.8 647 36.2
QL11p053191 Quercus lobata HOM05D004423 ORTHO05D005464 6.4e-90 335.9 718 34.5
Gohir.A01G171600 Gossypium hirsutum HOM05D004423 ORTHO05D005464 1.1e-89 335.1 648 36.0
TWI75G0836 Tripterygium wilfordii HOM05D004423 ORTHO05D005464 1.4e-89 334.7 603 37.6
Nitab4.5_0003679g0020 Nicotiana tabacum HOM05D004423 ORTHO05D005464 1.9e-89 334.3 590 37.3
Migut.B00041 Erythranthe guttata HOM05D004423 ORTHO05D005464 4.2e-89 333.2 611 37.6
Ciclev10027678m.g Citrus clementina HOM05D004423 ORTHO05D005464 7.1e-89 332.4 632 37.0
Ah.01g008070 Amaranthus hybridus HOM05D004423 ORTHO05D005464 1.2e-88 331.6 626 38.8
PGR042G3292 Punica granatum HOM05D004423 ORTHO05D005464 1.6e-88 331.3 593 39.3
Peaxi162Scf00362g00356 Petunia axillaris HOM05D004423 ORTHO05D005464 2.7e-88 330.5 585 37.4
CAN.G1235.36 Capsicum annuum HOM05D004423 ORTHO05D005464 4.6e-88 329.7 587 38.0
Aa31LG6G16860 Aethionema arabicum HOM05D004423 ORTHO05D005464 1.3e-87 328.2 589 36.8
arahy.Tifrunner.gnm1.ann1.CJIC4D Arachis hypogaea HOM05D004423 ORTHO05D005464 1.3e-87 328.2 632 35.1
Prupe.8G172300 Prunus persica HOM05D004423 ORTHO05D005464 1.8e-87 327.8 557 40.8
Sp7g37340 Schrenkiella parvula HOM05D004423 ORTHO05D005464 1.8e-87 327.8 587 38.0
arahy.Tifrunner.gnm1.ann1.YN7PRK Arachis hypogaea HOM05D004423 ORTHO05D005464 3.0e-87 327.0 603 36.7
AT4G38440 Arabidopsis thaliana HOM05D004423 ORTHO05D005464 1.1e-86 325.1 553 39.1
DCAR_022414 Daucus carota HOM05D004423 ORTHO05D005464 1.5e-86 324.7 617 38.1
AL7G10310 Arabidopsis lyrata HOM05D004423 ORTHO05D005464 3.3e-86 323.6 556 39.7
SGA_v2.0_scaffold58G20334 Striga asiatica HOM05D004423 ORTHO05D005464 3.3e-86 323.6 640 35.8
RcHm_v2.0_Chr6g0279371 Rosa chinensis HOM05D004423 ORTHO05D005464 4.3e-86 323.2 549 39.2
Sc18g0006140 Simmondsia chinensis HOM05D004423 ORTHO05D005464 4.3e-86 323.2 610 38.5
CsaV3_6G012570 Cucumis sativus L. HOM05D004423 ORTHO05D005464 5.6e-86 322.8 646 37.5
MD10G1131500 Malus domestica HOM05D004423 ORTHO05D005464 7.4e-86 322.4 556 39.4
MD05G1128200 Malus domestica HOM05D004423 ORTHO05D005464 1.3e-85 321.6 578 37.9
Glyma.01G063600 Glycine max HOM05D004423 ORTHO05D005464 1.6e-85 321.2 603 37.0
FvH4_2g15920 Fragaria vesca HOM05D004423 ORTHO05D005464 2.1e-85 320.9 583 38.1
ClCG02G011090 Citrullus lanatus HOM05D004423 ORTHO05D005464 2.8e-85 320.5 653 36.4
FAN20G1295 Fragaria x ananassa HOM05D004423 ORTHO05D005464 1.4e-84 318.2 583 37.9
Carub.0007s0033 Capsella rubella HOM05D004423 ORTHO05D005464 1.8e-84 317.8 577 38.0
FAN24G1532 Fragaria x ananassa HOM05D004423 ORTHO05D005464 3.1e-84 317.0 583 38.1
Sed0008640 Sechium edule HOM05D004423 ORTHO05D005464 4.0e-84 316.6 648 37.3
Hund06453 Selenicereus undatus HOM05D004423 ORTHO05D005464 4.0e-84 316.6 671 36.1
EL10Ac9g21318 Beta vulgaris HOM05D004423 ORTHO05D005464 5.3e-84 316.2 605 38.7
FAN15G2581 Fragaria x ananassa HOM05D004423 ORTHO05D005464 2.0e-83 314.3 580 38.3
ATR0322G068 Amborella trichopoda HOM05D004423 ORTHO05D005464 5.5e-81 306.2 681 34.1
CiPaw.05G087000 Carya illinoinensis HOM05D004423 ORTHO05D005464 5.5e-81 306.2 513 40.5
SHI08411 Sapria himalayana HOM05D004423 ORTHO05D005464 2.1e-80 304.3 593 37.4
Psat2g133680 Pisum sativum HOM05D004423 ORTHO05D005464 2.8e-77 293.9 397 42.8
MELO3C013664.2 Cucumis melo HOM05D004423 ORTHO05D005464 1.1e-76 292.0 667 35.7
Atru.chr5.3471 Acer truncatum HOM05D004423 ORTHO05D005464 1.8e-76 291.2 649 35.0
Hma1.2p1_0032F.1_g019030 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 5.3e-76 289.7 356 48.3
Thhalv10024216m.g Eutrema salsugineum HOM05D004423 ORTHO05D005464 6.9e-76 289.3 517 38.3
Gohir.D01G162500 Gossypium hirsutum HOM05D004423 ORTHO05D005464 1.7e-74 284.6 373 44.5
Eucgr.G01811 Eucalyptus grandis HOM05D004423 ORTHO05D005464 2.1e-72 277.7 366 45.1
Dinv41903 Davidia involucrata HOM05D004423 ORTHO05D005464 3.5e-72 276.9 204 65.7
Lj5C174T8 Lonicera japonica HOM05D004423 ORTHO05D005464 1.9e-70 271.2 217 59.4
unitig_21.g20846 Utricularia gibba HOM05D004423 ORTHO05D005464 1.9e-70 271.2 557 35.2
C04p46880 Brassica napus HOM05D004423 ORTHO05D005464 3.3e-70 270.4 336 47.6
BolC4t26280H Brassica oleracea HOM05D004423 ORTHO05D005464 4.8e-69 266.5 346 46.2
BraA04t16972Z Brassica rapa HOM05D004423 ORTHO05D005464 6.3e-69 266.2 343 46.1
A04p13130 Brassica napus HOM05D004423 ORTHO05D005464 8.2e-69 265.8 341 45.7
SHI46553 Sapria himalayana HOM05D004423 ORTHO05D005464 4.1e-68 263.5 568 34.9
AUR62009995 Chenopodium quinoa HOM05D004423 ORTHO05D005464 2.7e-64 250.8 695 33.5
AUR62012983 Chenopodium quinoa HOM05D004423 ORTHO05D005464 3.6e-64 250.4 356 46.1
Medtr5g046240 Medicago truncatula HOM05D004423 ORTHO05D005464 3.6e-64 250.4 350 40.6
Pp3c6_25040 Physcomitrium patens HOM05D004423 ORTHO05D005464 5.9e-59 233.0 625 31.7
Os06g0574450 Oryza sativa ssp. japonica HOM05D004423 ORTHO05D005464 9.4e-57 225.7 434 39.6
SMO119G0387 Selaginella moellendorffii HOM05D004423 ORTHO05D005464 3.9e-55 220.3 547 31.6
AagrBONN_evm.TU.Sc2ySwM_369.194 Anthoceros agrestis HOM05D004423 ORTHO05D005464 4.4e-54 216.9 568 33.6
BcaB06g27462 Brassica carinata HOM05D004423 ORTHO05D005464 5.7e-54 216.5 327 41.9
Mapoly0006s0149 Marchantia polymorpha HOM05D004423 ORTHO05D005464 9.1e-52 209.1 668 28.9
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 7.7e-43 179.5 135 63.7
VMungo1215G3113 Vigna mungo HOM05D004423 ORTHO05D005464 7.7e-35 152.9 108 65.7
Eucgr.E03994 Eucalyptus grandis HOM05D004423 ORTHO05D005464 1.2e-30 139.0 108 61.1
PSO782G0263 Papaver somniferum HOM05D004423 ORTHO05D005464 5.4e-28 130.2 326 34.7
Pp3c14_25290 Physcomitrium patens HOM05D004423 ORTHO05D005464 1.0e-26 125.9 207 36.2
VMungo1215G3389 Vigna mungo HOM05D004423 ORTHO05D005464 5.2e-23 113.6 122 50.0
VMungo1215G1157 Vigna mungo HOM05D004423 ORTHO05D005464 6.8e-23 113.2 299 31.1
SEGI_17262 Sequoiadendron giganteum HOM05D004423 ORTHO05D005464 2.8e-21 107.8 108 50.0
TAR717G0001 Trochodendron aralioides HOM05D004423 ORTHO05D005464 6.3e-21 106.7 70 70.0
Lj5A174T72 Lonicera japonica HOM05D004423 ORTHO05D005464 1.6e-19 102.1 329 30.7
Dinv41902 Davidia involucrata HOM05D004423 ORTHO05D005464 5.6e-17 93.6 265 31.3
CBR_g45640 Chara braunii HOM05D004423 ORTHO05D005464 1.5e-14 85.5 106 46.2
Hma1.2p1_0032F.1_g019010 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 1.4e-12 79.0 195 33.8
SEGI_14959 Sequoiadendron giganteum HOM05D004423 ORTHO05D005464 5.2e-07 60.5 245 24.1


User provided reference genes

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