Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.7e-120 434.9 218 100.0
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 9.2e-87 323.9 172 94.2
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 9.3e-47 191.0 187 56.7
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 3.0e-21 106.3 202 31.7
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.8e-19 99.8 208 35.6
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 4.8e-19 99.0 208 33.2
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 8.2e-19 98.2 205 34.1
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 9.1e-18 94.7 198 38.9
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 4.5e-17 92.4 198 32.3
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 5.9e-17 92.0 204 32.8
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 5.9e-17 92.0 206 31.6
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.2e-16 90.1 203 36.0
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 2.2e-16 90.1 141 39.0
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.9e-16 89.7 208 31.7
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 2.9e-16 89.7 204 30.4
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 3.8e-16 89.4 217 30.9
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 8.5e-16 88.2 141 38.3
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.5e-15 87.4 216 33.3
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 2.5e-15 86.7 194 32.0
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 3.2e-15 86.3 116 42.2
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.2e-15 86.3 116 42.2
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 3.2e-15 86.3 133 40.6
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 4.2e-15 85.9 120 40.0
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 4.2e-15 85.9 227 29.5
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 5.5e-15 85.5 202 30.2
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 5.5e-15 85.5 206 31.6
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 5.5e-15 85.5 205 31.7
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 5.5e-15 85.5 208 31.7
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.5e-15 85.5 199 31.7
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.2e-15 85.1 116 41.4
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.2e-14 84.3 200 31.0
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 1.2e-14 84.3 205 31.2
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 2.1e-14 83.6 229 29.7
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 3.6e-14 82.8 211 34.6
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.4e-13 80.9 241 28.6
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 1.8e-13 80.5 206 29.6
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 1.8e-13 80.5 200 30.5
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 4.0e-13 79.3 209 30.6
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 5.2e-13 79.0 206 29.1
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.2e-12 77.8 140 35.0
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.5e-12 77.4 140 35.0
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.5e-12 77.4 140 35.0
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.5e-12 77.4 221 30.3
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.0e-12 77.0 229 29.3
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 2.0e-12 77.0 183 31.7
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 2.0e-12 77.0 114 37.7
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 2.6e-12 76.6 199 31.2
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.3e-12 76.3 135 35.6
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 5.7e-12 75.5 230 27.8
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 7.5e-12 75.1 142 32.4
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 7.5e-12 75.1 226 29.2
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.2e-11 73.6 143 30.8
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 2.8e-11 73.2 113 41.6
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 2.8e-11 73.2 218 30.3
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 3.7e-11 72.8 245 28.6
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 4.8e-11 72.4 149 36.2
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 6.3e-11 72.0 174 29.9
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 8.2e-11 71.6 146 34.9
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 8.2e-11 71.6 160 31.2
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.1e-10 71.2 146 33.6
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 1.1e-10 71.2 133 34.6
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.4e-10 70.9 235 26.4
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 3.1e-10 69.7 116 36.2
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 4.1e-10 69.3 141 29.8
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 7.0e-10 68.6 184 28.8
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 7.0e-10 68.6 113 38.1
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 9.1e-10 68.2 154 35.1
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 9.1e-10 68.2 209 27.3
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 9.1e-10 68.2 171 29.2
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.2e-09 67.8 227 27.8
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 2.7e-09 66.6 188 31.4
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 2.7e-09 66.6 114 39.5
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.7e-09 66.6 223 28.3
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.5e-09 66.2 114 38.6
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 4.5e-09 65.9 207 30.9
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 5.9e-09 65.5 135 37.0
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 7.7e-09 65.1 212 27.8
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 7.7e-09 65.1 141 31.2
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 1.0e-08 64.7 207 28.5
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 1.3e-08 64.3 212 27.8
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 3.8e-08 62.8 114 35.1
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 6.5e-08 62.0 165 30.9
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.1e-07 61.2 232 26.7
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.9e-07 60.5 208 27.4
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.5e-07 58.9 146 34.2
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 7.2e-07 58.5 210 26.7
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 7.2e-07 58.5 208 31.2
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 3.6e-06 56.2 239 27.2
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 4.7e-06 55.8 144 32.6
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.1e-06 55.5 53 49.1


User provided reference genes

Program Settings