Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.2e-72 275.4 130 100.0
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.9e-23 112.8 141 49.6
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 1.9e-18 96.3 117 48.7
HPP92_020075 Vanilla planifolia HOM05D003969 ORTHO05D003125 4.3e-15 85.1 109 45.9
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 7.3e-15 84.3 120 40.0
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.6e-14 83.2 118 39.0
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.1e-13 80.5 115 43.5
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-13 80.5 113 40.7
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 3.1e-13 79.0 144 35.4
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.0e-13 78.6 112 40.2
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 1.2e-12 77.0 111 45.0
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.2e-12 77.0 115 42.6
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 3.4e-12 75.5 131 34.4
HPP92_020081 Vanilla planifolia HOM05D003969 ORTHO05D003125 3.4e-12 75.5 109 43.1
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.7e-11 73.2 126 40.5
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.9e-11 71.6 127 33.1
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.9e-11 71.6 127 33.1
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 4.9e-11 71.6 117 33.3
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.4e-10 70.1 124 36.3
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 2.4e-10 69.3 76 43.4
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 4.2e-10 68.6 114 38.6
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 5.4e-10 68.2 106 40.6
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.4e-10 68.2 66 54.5
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.4e-10 68.2 68 48.5
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.4e-10 68.2 68 48.5
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 5.4e-10 68.2 116 34.5
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 1.2e-09 67.0 138 35.5
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.6e-09 66.6 67 47.8
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 4.6e-09 65.1 150 28.7
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 4.6e-09 65.1 134 36.6
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 4.6e-09 65.1 134 36.6
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 4.6e-09 65.1 77 42.9
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 6.0e-09 64.7 70 47.1
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 6.0e-09 64.7 66 48.5
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 6.0e-09 64.7 120 36.7
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 7.8e-09 64.3 99 38.4
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 7.8e-09 64.3 74 43.2
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 1.0e-08 63.9 122 38.5
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 1.3e-08 63.5 122 33.6
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.7e-08 63.2 113 37.2
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 1.7e-08 63.2 85 42.4
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 2.3e-08 62.8 66 47.0
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 2.3e-08 62.8 66 47.0
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 3.0e-08 62.4 115 37.4
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 3.0e-08 62.4 89 40.4
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 3.9e-08 62.0 155 32.9
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 3.9e-08 62.0 125 31.2
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 3.9e-08 62.0 128 28.9
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 3.9e-08 62.0 111 36.9
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 3.9e-08 62.0 109 31.2
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 3.9e-08 62.0 63 44.4
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 5.1e-08 61.6 137 31.4
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 5.1e-08 61.6 83 41.0
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 6.6e-08 61.2 60 53.3
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 6.6e-08 61.2 74 41.9
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 8.7e-08 60.8 74 48.6
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 8.7e-08 60.8 74 48.6
Rhsim01G0050100 Rhododendron simsii HOM05D016725 ORTHO05D003125 8.7e-08 60.8 117 32.5
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 8.7e-08 60.8 132 34.8
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 1.1e-07 60.5 77 42.9
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.1e-07 60.5 67 47.8
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 1.1e-07 60.5 120 34.2
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 1.1e-07 60.5 131 31.3
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 1.5e-07 60.1 106 37.7
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 1.5e-07 60.1 63 49.2
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.9e-07 59.7 66 45.5
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.9e-07 59.7 74 48.6
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.9e-07 59.7 63 41.3
Os06g0646100 Oryza sativa ssp. japonica HOM05D021431 ORTHO05D003125 1.9e-07 59.7 112 35.7
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 1.9e-07 59.7 60 51.7
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 1.9e-07 59.7 125 31.2
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.9e-07 59.7 112 34.8
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 2.5e-07 59.3 86 39.5
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 2.5e-07 59.3 86 39.5
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 2.5e-07 59.3 112 40.2
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 2.5e-07 59.3 113 38.9
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 2.5e-07 59.3 120 36.7
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 3.3e-07 58.9 110 36.4
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.3e-07 58.9 76 42.1
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.3e-07 58.9 77 41.6
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 3.3e-07 58.9 120 35.0
THA.LOC104808923 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 3.3e-07 58.9 145 31.0
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 4.3e-07 58.5 134 28.4
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.3e-07 58.5 125 32.0
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 5.6e-07 58.2 87 37.9
Os10g0331400 Oryza sativa ssp. japonica HOM05D053963 ORTHO05D049795 5.6e-07 58.2 123 36.6
Rhsim01G0052800 Rhododendron simsii HOM05D016725 ORTHO05D003125 7.3e-07 57.8 107 32.7
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 7.3e-07 57.8 121 29.8
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 7.3e-07 57.8 122 31.1
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 9.6e-07 57.4 86 38.4
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 9.6e-07 57.4 86 38.4
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 9.6e-07 57.4 82 40.2
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 9.6e-07 57.4 72 41.7
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 9.6e-07 57.4 124 32.3
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 9.6e-07 57.4 65 43.1
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 1.3e-06 57.0 121 35.5
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.3e-06 57.0 68 45.6
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 1.3e-06 57.0 124 32.3
ATR0629G091 Amborella trichopoda HOM05D003969 ORTHO05D003125 1.6e-06 56.6 104 38.5
Gohir.A05G011500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.6e-06 56.6 91 41.8
Rhsim01G0050000 Rhododendron simsii HOM05D016725 ORTHO05D003125 1.6e-06 56.6 104 34.6
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.6e-06 56.6 65 43.1
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 2.1e-06 56.2 62 41.9
Zm00001eb145650 Zea mays HOM05D053963 ORTHO05D049795 2.1e-06 56.2 111 37.8
Aqoxy7G03536 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 2.8e-06 55.8 113 33.6
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 2.8e-06 55.8 112 32.1
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 2.8e-06 55.8 68 44.1
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 2.8e-06 55.8 68 44.1
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 2.8e-06 55.8 135 34.8
MSTRG.10639 Avicennia marina HOM05D003969 ORTHO05D003125 4.8e-06 55.1 111 34.2
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 4.8e-06 55.1 68 44.1
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 6.2e-06 54.7 112 37.5
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 6.2e-06 54.7 125 34.4
CDE02G0310 Ceratophyllum demersum HOM05D003969 ORTHO05D003125 8.1e-06 54.3 63 44.4
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 8.1e-06 54.3 103 36.9
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 8.1e-06 54.3 77 44.2
Manes.14G138428 Manihot esculenta HOM05D003969 ORTHO05D003125 8.1e-06 54.3 82 40.2
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 8.1e-06 54.3 62 46.8
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 8.1e-06 54.3 122 29.5


User provided reference genes

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