Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023710 Vanilla planifolia HOM05D003486 ORTHO05D004600 1.5e-256 889.0 456 100.0
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.6e-77 294.3 471 43.5
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 9.0e-76 288.5 478 42.9
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 1.3e-74 284.6 481 42.6
CiPaw.01G100300 Carya illinoinensis HOM05D003486 ORTHO05D004600 4.9e-74 282.7 467 43.3
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 1.4e-73 281.2 476 42.6
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 2.7e-72 276.9 469 42.0
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 7.9e-72 275.4 460 42.8
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.8e-71 274.2 461 41.9
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 2.3e-71 273.9 459 42.0
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 2.3e-71 273.9 467 43.0
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 5.1e-71 272.7 464 42.2
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 1.1e-70 271.6 460 41.7
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 1.5e-70 271.2 468 41.9
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 1.9e-70 270.8 462 41.8
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 2.5e-70 270.4 462 41.6
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 7.4e-70 268.9 482 41.9
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 9.6e-70 268.5 459 42.3
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 1.6e-69 267.7 454 41.9
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 2.1e-69 267.3 452 40.9
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 2.1e-69 267.3 465 42.2
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 2.8e-69 266.9 461 40.6
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 1.8e-68 264.2 451 41.2
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 2.4e-68 263.8 460 42.2
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 2.4e-68 263.8 460 42.2
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 2.4e-68 263.8 451 40.8
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 3.1e-68 263.5 474 40.5
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 4.0e-68 263.1 452 40.3
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 6.9e-68 262.3 467 41.1
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 1.5e-67 261.2 473 41.0
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 4.5e-67 259.6 477 41.1
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 1.3e-66 258.1 478 39.5
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 1.3e-66 258.1 469 40.9
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 2.2e-66 257.3 448 40.0
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 2.2e-66 257.3 460 41.1
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 2.2e-66 257.3 473 41.4
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 2.9e-66 256.9 488 40.8
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 4.9e-66 256.1 492 37.8
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 6.4e-66 255.8 448 39.5
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 8.4e-66 255.4 513 36.5
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 1.1e-65 255.0 462 40.3
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 1.4e-65 254.6 518 37.6
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 1.9e-65 254.2 414 40.6
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 7.1e-65 252.3 462 40.3
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 9.3e-65 251.9 453 39.3
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 1.6e-64 251.1 455 41.1
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 1.6e-64 251.1 445 39.8
Eucgr.L02279 Eucalyptus grandis HOM05D003486 ORTHO05D004600 3.5e-64 250.0 470 38.3
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 7.9e-64 248.8 472 38.3
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 1.3e-63 248.1 462 39.6
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 1.8e-63 247.7 473 38.9
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 2.3e-63 247.3 479 39.5
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 2.3e-63 247.3 461 39.7
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 3.0e-63 246.9 458 40.2
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 5.1e-63 246.1 450 40.0
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 8.7e-63 245.4 466 39.5
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 1.1e-62 245.0 443 39.7
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 5.6e-62 242.7 475 37.1
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 7.4e-62 242.3 484 38.2
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 2.8e-61 240.4 449 39.9
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 3.7e-61 240.0 409 39.9
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 6.2e-61 239.2 458 39.5
Nn1g09587 Nelumbo nucifera HOM05D003486 ORTHO05D004600 2.4e-60 237.3 454 40.1
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 2.0e-59 234.2 439 38.7
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 3.4e-59 233.4 572 34.3
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 4.5e-59 233.0 478 36.6
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 1.3e-58 231.5 464 39.2
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 7.9e-56 222.2 407 42.5
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 3.0e-55 220.3 471 37.8
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 5.1e-55 219.5 464 37.5
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 7.4e-54 215.7 468 36.5
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 7.4e-54 215.7 468 36.5
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 2.6e-51 207.2 399 37.8
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 1.3e-50 204.9 462 35.1
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 2.1e-48 197.6 381 38.3
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 7.4e-46 189.1 458 34.9
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 9.7e-46 188.7 442 35.7
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 4.8e-45 186.4 508 32.3
FAN07G1795 Fragaria x ananassa HOM05D003486 ORTHO05D004600 9.1e-44 182.2 381 39.4
Hma1.2p1_0847F.1_g227860 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 1.0e-42 178.7 162 61.7
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 1.9e-41 174.5 486 32.3
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 4.7e-40 169.9 536 29.5
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 5.1e-39 166.4 493 30.0
GSVIVG01010755001 Vitis vinifera HOM05D003486 ORTHO05D004600 3.5e-35 153.7 154 57.8
Os04g0492500 Oryza sativa ssp. japonica HOM05D003486 ORTHO05D004600 1.2e-32 145.2 152 55.3
Haze_01510 Corylus avellana HOM05D003486 ORTHO05D004600 3.1e-28 130.6 134 55.2
CAN.G336.8 Capsicum annuum HOM05D003486 ORTHO05D004600 2.6e-27 127.5 135 54.8
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 4.2e-25 120.2 371 30.7
DCAR_023939 Daucus carota HOM05D003486 ORTHO05D004600 1.2e-24 118.6 124 54.8
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 1.6e-24 118.2 162 41.4
Solyc11g045000.1 Solanum lycopersicum HOM05D003486 ORTHO05D004600 8.0e-24 115.9 320 32.8
GSVIVG01010757001 Vitis vinifera HOM05D003486 ORTHO05D004600 2.2e-21 107.8 263 35.7
Nitab4.5_0001940g0020 Nicotiana tabacum HOM05D003486 ORTHO05D004600 3.7e-21 107.1 318 31.4
Peaxi162Scf00126g00121 Petunia axillaris HOM05D003486 ORTHO05D004600 6.3e-21 106.3 331 30.8
SEGI_39220 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 1.2e-19 102.1 104 54.8
Ah.07g202020 Amaranthus hybridus HOM05D003486 ORTHO05D004600 7.7e-19 99.4 149 44.3
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 1.0e-18 99.0 196 38.8
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 2.1e-16 91.3 348 30.7
Nitab4.5_0001940g0010 Nicotiana tabacum HOM05D003486 ORTHO05D004600 4.7e-16 90.1 78 60.3
Nitab4.5_0001263g0030 Nicotiana tabacum HOM05D003486 ORTHO05D004600 8.0e-16 89.4 78 59.0
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 6.8e-15 86.3 117 37.6
ClCG08G004740 Citrullus lanatus HOM05D003486 ORTHO05D004600 4.8e-13 80.1 126 38.9
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 2.9e-10 70.9 52 65.4
CAN.G336.7 Capsicum annuum HOM05D003486 ORTHO05D004600 5.0e-10 70.1 272 29.0
Cpa.g.sc9.277 Carica papaya HOM05D003486 ORTHO05D004600 1.5e-09 68.6 90 40.0
BcaC02g10121 Brassica carinata HOM05D003486 ORTHO05D004600 2.3e-07 61.2 130 34.6
Ah.07g202030 Amaranthus hybridus HOM05D003486 ORTHO05D004600 3.0e-07 60.8 214 26.6
Cpa.g.sc9.276 Carica papaya HOM05D003486 ORTHO05D004600 2.0e-06 58.2 70 51.4


User provided reference genes

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