Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 2.6e-69 265.8 187 100.0
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.4e-22 110.5 167 63.5
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 5.8e-21 105.1 152 65.1
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 9.8e-21 104.4 163 62.6
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 2.9e-20 102.8 150 65.3
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 3.7e-20 102.4 154 63.6
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 6.4e-20 101.7 125 72.0
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 8.3e-20 101.3 161 61.5
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.4e-19 100.5 155 67.1
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.4e-19 100.5 164 60.4
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.4e-19 100.5 158 62.0
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 1.9e-19 100.1 152 63.2
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 2.4e-19 99.8 168 58.9
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 3.2e-19 99.4 150 64.0
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 3.2e-19 99.4 170 58.8
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 5.4e-19 98.6 149 65.1
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 9.2e-19 97.8 130 70.8
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.2e-19 97.8 164 61.0
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.6e-18 97.1 129 72.9
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 2.1e-18 96.7 162 61.7
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 2.7e-18 96.3 133 66.9
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 2.7e-18 96.3 140 63.6
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 3.5e-18 95.9 123 70.7
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 3.5e-18 95.9 161 62.7
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 4.6e-18 95.5 150 62.7
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 4.6e-18 95.5 171 56.1
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 4.6e-18 95.5 184 55.4
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 4.6e-18 95.5 130 69.2
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 4.6e-18 95.5 156 62.2
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 4.6e-18 95.5 164 58.5
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 4.6e-18 95.5 152 63.2
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 6.0e-18 95.1 122 71.3
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 7.8e-18 94.7 133 68.4
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 7.8e-18 94.7 132 69.7
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 7.8e-18 94.7 162 59.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.3e-17 94.0 156 60.9
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 1.3e-17 94.0 131 66.4
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.3e-17 94.0 131 66.4
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.3e-17 94.0 130 67.7
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 1.7e-17 93.6 148 60.1
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.7e-17 93.6 173 55.5
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.7e-17 93.6 147 64.6
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.7e-17 93.6 130 68.5
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.7e-17 93.6 130 68.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.7e-17 93.6 140 65.0
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.7e-17 93.6 131 69.5
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.7e-17 93.6 130 68.5
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 2.3e-17 93.2 142 64.1
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 3.0e-17 92.8 142 64.8
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 3.0e-17 92.8 122 72.1
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 3.9e-17 92.4 133 67.7
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 3.9e-17 92.4 157 60.5
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 5.1e-17 92.0 130 67.7
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 5.1e-17 92.0 139 64.7
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 5.1e-17 92.0 119 71.4
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 5.1e-17 92.0 119 71.4
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 6.6e-17 91.7 154 63.6
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 6.6e-17 91.7 123 69.1
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 8.6e-17 91.3 130 70.0
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.1e-16 90.9 117 75.2
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 1.1e-16 90.9 129 68.2
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.5e-16 90.5 127 70.9
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 1.9e-16 90.1 156 60.3
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 1.9e-16 90.1 133 66.9
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 1.9e-16 90.1 133 66.9
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.9e-16 90.1 131 66.4
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.9e-16 90.1 156 61.5
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.9e-16 90.1 129 65.9
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 1.9e-16 90.1 122 73.8
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.5e-16 89.7 117 74.4
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 2.5e-16 89.7 145 64.1
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.5e-16 89.7 164 60.4
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 2.5e-16 89.7 127 55.1
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 2.5e-16 89.7 123 69.9
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 3.3e-16 89.4 116 68.1
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.3e-16 89.0 163 60.7
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 7.3e-16 88.2 163 60.1
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 7.3e-16 88.2 163 60.1
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 7.3e-16 88.2 127 73.2
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 9.5e-16 87.8 144 59.7
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.8e-15 86.3 135 65.2
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 8.1e-15 84.7 122 76.2
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 8.1e-15 84.7 116 52.6
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 2.3e-14 83.2 137 49.6
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 3.1e-14 82.8 130 65.4
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 3.1e-14 82.8 154 60.4
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 4.0e-14 82.4 153 62.7
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 5.2e-14 82.0 113 68.1
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 2.6e-13 79.7 133 69.9
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 4.4e-13 79.0 117 70.1
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.1e-11 74.3 124 37.1
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 7.1e-11 71.6 93 48.4
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 6.0e-10 68.6 116 66.4
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 3.0e-09 66.2 57 63.2
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 2.5e-08 63.2 66 53.0
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 5.6e-08 62.0 89 60.7
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 1.2e-07 60.8 165 57.6
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 6.2e-07 58.5 128 36.7
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.8e-06 57.0 41 68.3


User provided reference genes

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