Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022913 Vanilla planifolia HOM05D003555 ORTHO05D004542 8.6e-182 640.2 323 100.0
TAR629G2425 Trochodendron aralioides HOM05D003555 ORTHO05D004542 1.4e-136 490.0 288 83.0
Prupe.3G312200 Prunus persica HOM05D003555 ORTHO05D004542 2.5e-136 489.2 288 81.9
MBI11_g08158_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 4.2e-136 488.4 288 81.6
Cfa007176 Carpinus fangiana HOM05D003555 ORTHO05D004542 7.1e-136 487.6 288 82.6
Gohir.A05G334700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 1.6e-135 486.5 288 83.0
Thecc.04G045300 Theobroma cacao HOM05D003555 ORTHO05D004542 2.1e-135 486.1 288 81.9
Manes.04G091900 Manihot esculenta HOM05D003555 ORTHO05D004542 1.0e-134 483.8 288 81.6
TAR374G1733 Trochodendron aralioides HOM05D003555 ORTHO05D004542 1.3e-134 483.4 288 80.9
Duzib187G1504 Durio zibethinus HOM05D003555 ORTHO05D004542 2.3e-134 482.6 288 81.2
Gorai.012G082900 Gossypium raimondii HOM05D003555 ORTHO05D004542 3.0e-134 482.3 288 81.9
MD17G1008500 Malus domestica HOM05D003555 ORTHO05D004542 1.5e-133 479.9 288 80.9
Duzib264G0281 Durio zibethinus HOM05D003555 ORTHO05D004542 1.9e-133 479.6 288 80.9
Gohir.A11G063400 Gossypium hirsutum HOM05D003555 ORTHO05D004542 2.5e-133 479.2 288 80.6
MD09G1004500 Malus domestica HOM05D003555 ORTHO05D004542 4.3e-133 478.4 288 80.2
TWI34G1938 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 4.3e-133 478.4 288 79.9
Gohir.D11G067700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 5.7e-133 478.0 288 80.9
PGR083G2609 Punica granatum HOM05D003555 ORTHO05D004542 5.7e-133 478.0 290 81.0
TWI60G1549 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 5.7e-133 478.0 288 79.5
CiPaw.04G001900 Carya illinoinensis HOM05D003555 ORTHO05D004542 7.4e-133 477.6 288 80.2
PSO478G0165 Papaver somniferum HOM05D003555 ORTHO05D004542 9.6e-133 477.2 288 80.2
COL.COLO4_10540 Corchorus olitorius HOM05D003555 ORTHO05D004542 1.3e-132 476.9 288 81.2
FAN02G1454 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.3e-132 476.9 288 79.5
Gohir.D04G073600 Gossypium hirsutum HOM05D003555 ORTHO05D004542 1.3e-132 476.9 288 81.6
GSVIVG01008626001 Vitis vinifera HOM05D003555 ORTHO05D004542 1.3e-132 476.9 288 80.6
MELO3C025061.2 Cucumis melo HOM05D003555 ORTHO05D004542 2.1e-132 476.1 288 81.6
CANSAT64G0789 Cannabis sativa HOM05D003555 ORTHO05D004542 3.7e-132 475.3 288 80.2
Cpa.g.sc70.83 Carica papaya HOM05D003555 ORTHO05D004542 4.8e-132 474.9 288 79.5
THA.LOC104805306 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 6.3e-132 474.6 288 79.2
CSS0013918 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 8.2e-132 474.2 288 81.2
ClCG01G008140 Citrullus lanatus HOM05D003555 ORTHO05D004542 8.2e-132 474.2 288 81.6
CsaV3_5G020170 Cucumis sativus L. HOM05D003555 ORTHO05D004542 8.2e-132 474.2 288 80.9
RcHm_v2.0_Chr2g0176361 Rosa chinensis HOM05D003555 ORTHO05D004542 8.2e-132 474.2 288 79.2
CSS0044185 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 1.1e-131 473.8 288 80.9
Lalb_Chr14g0363981 Lupinus albus HOM05D003555 ORTHO05D004542 1.1e-131 473.8 288 78.8
QL02p062748 Quercus lobata HOM05D003555 ORTHO05D004542 1.1e-131 473.8 288 78.5
TAR622G0101 Trochodendron aralioides HOM05D003555 ORTHO05D004542 2.4e-131 472.6 288 80.2
vmacro19161 Vaccinium macrocarpon HOM05D003555 ORTHO05D004542 2.4e-131 472.6 288 80.6
FvH4_6g54180 Fragaria vesca HOM05D003555 ORTHO05D004542 3.1e-131 472.2 288 78.8
FAN05G2121 Fragaria x ananassa HOM05D003555 ORTHO05D004542 3.1e-131 472.2 288 78.5
FAN09G3428 Fragaria x ananassa HOM05D003555 ORTHO05D004542 3.1e-131 472.2 288 78.8
FAN14G0379 Fragaria x ananassa HOM05D003555 ORTHO05D004542 3.1e-131 472.2 288 78.8
Dinv11219 Davidia involucrata HOM05D003555 ORTHO05D004542 4.1e-131 471.9 288 80.9
Potri.017G061100 Populus trichocarpa HOM05D003555 ORTHO05D004542 5.3e-131 471.5 288 78.8
Glyma.02G065500 Glycine max HOM05D003555 ORTHO05D004542 9.0e-131 470.7 288 79.2
Sabra17G0054300 Salix brachista HOM05D003555 ORTHO05D004542 9.0e-131 470.7 288 79.2
THA.LOC104825653 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 9.0e-131 470.7 288 79.2
Actinidia25536 Actinidia chinensis HOM05D003555 ORTHO05D004542 1.5e-130 469.9 288 80.6
GSVIVG01033006001 Vitis vinifera HOM05D003555 ORTHO05D004542 1.5e-130 469.9 288 77.8
Cc05_g01690 Coffea canephora HOM05D003555 ORTHO05D004542 2.0e-130 469.5 290 79.3
Ciclev10015638m.g Citrus clementina HOM05D003555 ORTHO05D004542 2.6e-130 469.2 288 78.5
Glyma.16G050200 Glycine max HOM05D003555 ORTHO05D004542 3.4e-130 468.8 288 78.1
Glyma.19G101000 Glycine max HOM05D003555 ORTHO05D004542 3.4e-130 468.8 289 78.9
THA.LOC104823995 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 5.9e-130 468.0 288 77.8
arahy.Tifrunner.gnm1.ann1.N4MBCZ Arachis hypogaea HOM05D003555 ORTHO05D004542 1.0e-129 467.2 288 78.1
Dinv23202 Davidia involucrata HOM05D003555 ORTHO05D004542 1.0e-129 467.2 288 79.5
VMungo1383G1114 Vigna mungo HOM05D003555 ORTHO05D004542 1.0e-129 467.2 288 78.1
Glyma.16G146600 Glycine max HOM05D003555 ORTHO05D004542 1.3e-129 466.8 288 78.5
Sed0000891 Sechium edule HOM05D003555 ORTHO05D004542 1.7e-129 466.5 288 79.5
ATR0582G027 Amborella trichopoda HOM05D003555 ORTHO05D004542 2.9e-129 465.7 288 78.1
DCAR_021412 Daucus carota HOM05D003555 ORTHO05D004542 2.9e-129 465.7 290 78.6
AL1G24480 Arabidopsis lyrata HOM05D003555 ORTHO05D004542 3.8e-129 465.3 288 77.1
arahy.Tifrunner.gnm1.ann1.HQ0MCX Arachis hypogaea HOM05D003555 ORTHO05D004542 3.8e-129 465.3 288 77.8
A06p08830 Brassica napus HOM05D003555 ORTHO05D004542 3.8e-129 465.3 288 77.1
BraA06t24078Z Brassica rapa HOM05D003555 ORTHO05D004542 3.8e-129 465.3 288 77.1
DCAR_016355 Daucus carota HOM05D003555 ORTHO05D004542 3.8e-129 465.3 289 78.2
Lj5A90G23 Lonicera japonica HOM05D003555 ORTHO05D004542 6.5e-129 464.5 288 78.1
CARHR013160 Cardamine hirsuta HOM05D003555 ORTHO05D004542 8.5e-129 464.2 288 76.7
HanXRQChr16g0528421 Helianthus annuus HOM05D003555 ORTHO05D004542 8.5e-129 464.2 288 77.1
Actinidia18318 Actinidia chinensis HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 79.5
A08p32590 Brassica napus HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 76.7
C08p15700 Brassica napus HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 76.7
BolC8t49197H Brassica oleracea HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 76.7
BraA08t35183Z Brassica rapa HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 76.7
Duzib147G0304 Durio zibethinus HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 77.8
Lj1g0000762 Lotus japonicus HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 77.8
Nn4g22182 Nelumbo nucifera HOM05D003555 ORTHO05D004542 1.1e-128 463.8 285 80.7
VMungo0464G0001 Vigna mungo HOM05D003555 ORTHO05D004542 1.1e-128 463.8 288 77.8
BcaB03g13163 Brassica carinata HOM05D003555 ORTHO05D004542 1.4e-128 463.4 288 76.7
Thhalv10007948m.g Eutrema salsugineum HOM05D003555 ORTHO05D004542 1.9e-128 463.0 288 76.4
Hma1.2p1_1187F.1_g265130 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 1.9e-128 463.0 288 78.5
Hma1.2p1_1187F.1_g265140 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 1.9e-128 463.0 288 78.5
BcaC05g25110 Brassica carinata HOM05D003555 ORTHO05D004542 2.5e-128 462.6 288 76.0
Sp1g11410 Schrenkiella parvula HOM05D003555 ORTHO05D004542 2.5e-128 462.6 288 76.4
Atru.chr6.2636 Acer truncatum HOM05D003555 ORTHO05D004542 4.2e-128 461.8 288 77.1
AT1G12840 Arabidopsis thaliana HOM05D003555 ORTHO05D004542 4.2e-128 461.8 288 77.1
C05p10440 Brassica napus HOM05D003555 ORTHO05D004542 5.5e-128 461.5 290 76.6
BolC5t29790H Brassica oleracea HOM05D003555 ORTHO05D004542 5.5e-128 461.5 290 76.6
Eucgr.G01943 Eucalyptus grandis HOM05D003555 ORTHO05D004542 5.5e-128 461.5 291 77.0
Phvul.004G070900 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 5.5e-128 461.5 288 78.1
CDE05G2896 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 7.2e-128 461.1 287 76.7
ECA232G4336 Erigeron canadensis HOM05D003555 ORTHO05D004542 7.2e-128 461.1 290 77.6
Potri.001G322500 Populus trichocarpa HOM05D003555 ORTHO05D004542 7.2e-128 461.1 288 77.8
Sed0008328 Sechium edule HOM05D003555 ORTHO05D004542 7.2e-128 461.1 288 78.8
BcaC07g41676 Brassica carinata HOM05D003555 ORTHO05D004542 9.3e-128 460.7 288 76.7
C08p47080 Brassica napus HOM05D003555 ORTHO05D004542 9.3e-128 460.7 288 76.7
BolC8t52247H Brassica oleracea HOM05D003555 ORTHO05D004542 9.3e-128 460.7 288 76.7
BcaC05g25150 Brassica carinata HOM05D003555 ORTHO05D004542 1.2e-127 460.3 290 76.6
Lalb_Chr24g0403201 Lupinus albus HOM05D003555 ORTHO05D004542 1.2e-127 460.3 288 76.7
Phvul.001G086700 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 1.2e-127 460.3 288 77.4
TPR.G17457 Trifolium pratense HOM05D003555 ORTHO05D004542 1.2e-127 460.3 290 76.2
Hund11754 Selenicereus undatus HOM05D003555 ORTHO05D004542 1.6e-127 459.9 288 76.7
Zm00001eb297260 Zea mays HOM05D003555 ORTHO05D004542 2.1e-127 459.5 291 78.0
BcaC07g40270 Brassica carinata HOM05D003555 ORTHO05D004542 3.6e-127 458.8 288 76.4
A09p63580 Brassica napus HOM05D003555 ORTHO05D004542 3.6e-127 458.8 288 76.4
BolC8t50972H Brassica oleracea HOM05D003555 ORTHO05D004542 3.6e-127 458.8 288 76.4
BraA09t41708Z Brassica rapa HOM05D003555 ORTHO05D004542 3.6e-127 458.8 288 76.4
Oeu058121.1 Olea europaea HOM05D003555 ORTHO05D004542 3.6e-127 458.8 291 79.4
Aa31LG1G1920 Aethionema arabicum HOM05D003555 ORTHO05D004542 4.6e-127 458.4 288 75.7
Migut.D01225 Erythranthe guttata HOM05D003555 ORTHO05D004542 4.6e-127 458.4 290 77.2
Lsat_1_v5_gn_4_84140 Lactuca sativa HOM05D003555 ORTHO05D004542 4.6e-127 458.4 288 76.7
Psat0s1497g0040 Pisum sativum HOM05D003555 ORTHO05D004542 4.6e-127 458.4 290 76.6
Os05g0593100 Oryza sativa ssp. japonica HOM05D003555 ORTHO05D004542 6.1e-127 458.0 291 77.0
Haze_14935 Corylus avellana HOM05D003555 ORTHO05D004542 7.9e-127 457.6 347 68.6
Lsat_1_v5_gn_6_50360 Lactuca sativa HOM05D003555 ORTHO05D004542 1.0e-126 457.2 288 76.4
Medtr7g083720 Medicago truncatula HOM05D003555 ORTHO05D004542 1.0e-126 457.2 290 76.9
Actinidia36835 Actinidia chinensis HOM05D003555 ORTHO05D004542 1.8e-126 456.4 288 78.5
BcaB08g34247 Brassica carinata HOM05D003555 ORTHO05D004542 1.8e-126 456.4 288 76.0
unitig_61.g26203 Utricularia gibba HOM05D003555 ORTHO05D004542 1.8e-126 456.4 290 77.6
SalBow1G4818 Salvia bowleyana HOM05D003555 ORTHO05D004542 3.0e-126 455.7 290 77.9
Solyc03g097800.4 Solanum lycopersicum HOM05D003555 ORTHO05D004542 3.0e-126 455.7 290 77.9
C08p33730 Brassica napus HOM05D003555 ORTHO05D004542 3.9e-126 455.3 288 76.0
MSTRG.22881 Avicennia marina HOM05D003555 ORTHO05D004542 6.7e-126 454.5 290 77.9
CAN.G637.54 Capsicum annuum HOM05D003555 ORTHO05D004542 8.7e-126 454.1 290 77.9
Nn5g27103 Nelumbo nucifera HOM05D003555 ORTHO05D004542 8.7e-126 454.1 286 76.6
Zm00001eb345260 Zea mays HOM05D003555 ORTHO05D004542 1.1e-125 453.8 291 77.0
CAN.G257.127 Capsicum annuum HOM05D003555 ORTHO05D004542 2.5e-125 452.6 291 77.3
Carub.0001s1258 Capsella rubella HOM05D003555 ORTHO05D004542 3.3e-125 452.2 288 75.0
AUR62015995 Chenopodium quinoa HOM05D003555 ORTHO05D004542 3.3e-125 452.2 288 74.7
Sc13g0008590 Simmondsia chinensis HOM05D003555 ORTHO05D004542 3.3e-125 452.2 288 75.3
Sopen03g028540 Solanum pennellii HOM05D003555 ORTHO05D004542 3.3e-125 452.2 290 77.6
Hund04735 Selenicereus undatus HOM05D003555 ORTHO05D004542 7.4e-125 451.1 289 74.7
Ah.07g207280 Amaranthus hybridus HOM05D003555 ORTHO05D004542 9.7e-125 450.7 288 74.7
EL10Ac3g05664 Beta vulgaris HOM05D003555 ORTHO05D004542 1.6e-124 449.9 288 73.6
Ca_08125_v3 Cicer arietinum L. HOM05D003555 ORTHO05D004542 4.8e-124 448.4 290 74.8
MSTRG.11256 Avicennia marina HOM05D003555 ORTHO05D004542 1.4e-123 446.8 290 76.9
Peaxi162Scf00171g01130 Petunia axillaris HOM05D003555 ORTHO05D004542 1.4e-123 446.8 290 76.6
Ah.13g068520 Amaranthus hybridus HOM05D003555 ORTHO05D004542 3.1e-123 445.7 288 74.3
Sabra16G0204700 Salix brachista HOM05D003555 ORTHO05D004542 5.9e-122 441.4 319 69.3
MBI07_g40357_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 6.5e-121 438.0 286 75.9
Rhsim08G0195300 Rhododendron simsii HOM05D003555 ORTHO05D004542 2.5e-120 436.0 367 62.4
Zm00001eb163710 Zea mays HOM05D003555 ORTHO05D004542 7.9e-119 431.0 291 73.9
COL.COLO4_13344 Corchorus olitorius HOM05D003555 ORTHO05D004542 5.1e-118 428.3 288 76.0
SGA_v2.0_scaffold14G07035 Striga asiatica HOM05D003555 ORTHO05D004542 6.9e-115 417.9 290 73.1
Manes.11G078200 Manihot esculenta HOM05D003555 ORTHO05D004542 4.5e-114 415.2 252 80.6
Gorai.007G072500 Gossypium raimondii HOM05D003555 ORTHO05D004542 5.9e-114 414.8 251 80.9
SEGI_35214 Sequoiadendron giganteum HOM05D003555 ORTHO05D004542 2.9e-113 412.5 287 68.3
Lsat_1_v5_gn_4_84120 Lactuca sativa HOM05D003555 ORTHO05D004542 3.9e-110 402.1 250 77.2
Nn3g16313 Nelumbo nucifera HOM05D003555 ORTHO05D004542 3.9e-110 402.1 286 69.2
CDE05G1333 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 6.7e-110 401.4 287 69.0
Sc25g0000460 Simmondsia chinensis HOM05D003555 ORTHO05D004542 6.7e-110 401.4 251 78.1
Mapoly0126s0013 Marchantia polymorpha HOM05D003555 ORTHO05D004542 4.4e-109 398.7 288 64.9
SMO200G0006 Selaginella moellendorffii HOM05D003555 ORTHO05D004542 1.2e-103 380.6 286 63.6
Pp3c13_14220 Physcomitrium patens HOM05D003555 ORTHO05D004542 4.0e-102 375.6 286 62.9
ECA246G0182 Erigeron canadensis HOM05D003555 ORTHO05D004542 1.4e-99 367.1 227 76.2
AagrBONN_evm.TU.Sc2ySwM_228.2553 Anthoceros agrestis HOM05D003555 ORTHO05D004542 5.9e-98 361.7 289 59.5
AUR62021202 Chenopodium quinoa HOM05D003555 ORTHO05D004542 2.9e-97 359.4 248 71.0
Lj9A484G61 Lonicera japonica HOM05D003555 ORTHO05D004542 2.3e-94 349.7 235 73.2
Eucgr.G01949 Eucalyptus grandis HOM05D003555 ORTHO05D004542 6.3e-92 341.7 211 79.6
Nitab4.5_0007858g0030 Nicotiana tabacum HOM05D003555 ORTHO05D004542 2.5e-88 329.7 210 78.1
Nitab4.5_0005207g0040 Nicotiana tabacum HOM05D003555 ORTHO05D004542 9.5e-88 327.8 209 78.0
Oeu058117.1 Olea europaea HOM05D003555 ORTHO05D004542 1.6e-82 310.5 293 59.7
QL02p069938 Quercus lobata HOM05D003555 ORTHO05D004542 1.1e-80 304.3 288 57.3
CSS0036109 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 2.5e-72 276.6 201 73.1
Actinidia08900 Actinidia chinensis HOM05D003555 ORTHO05D004542 8.9e-70 268.1 247 58.3
MCO15G152 Micromonas commoda HOM05D003555 ORTHO05D004542 1.7e-68 263.8 301 46.2
Pp3c9_8980 Physcomitrium patens HOM05D003555 ORTHO05D004542 3.7e-68 262.7 287 45.3
Cre06.g250250 Chlamydomonas reinhardtii HOM05D003555 ORTHO05D004542 7.0e-67 258.5 285 45.6
HanXRQChr09g0273581 Helianthus annuus HOM05D003555 ORTHO05D004542 3.3e-64 249.6 213 60.1
CBR_g724 Chara braunii HOM05D003555 ORTHO05D004542 1.4e-62 244.2 186 60.8
PRCOL_00003348 Prasinoderma coloniale HOM05D003555 ORTHO05D004542 7.5e-61 238.4 288 43.1
Lsat_1_v5_gn_5_10760 Lactuca sativa HOM05D003555 ORTHO05D004542 1.0e-57 228.0 144 74.3
Haze_27306 Corylus avellana HOM05D003555 ORTHO05D163602 3.8e-52 209.5 291 39.2
Hma1.2p1_0403F.1_g145240 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 8.1e-39 165.2 136 62.5
Cfa026601 Carpinus fangiana HOM05D003555 ORTHO05D123537 1.2e-34 151.4 292 32.9
BcaB01g02330 Brassica carinata HOM05D003555 ORTHO05D002990 7.9e-34 148.7 185 51.4
FAN09G3010 Fragaria x ananassa HOM05D003555 ORTHO05D004542 8.1e-31 138.7 81 80.2
RcHm_v2.0_Chr5g0048981 Rosa chinensis HOM05D003555 ORTHO05D004542 8.4e-28 128.6 126 54.0
BcaC02g12651 Brassica carinata HOM05D003555 ORTHO05D095367 1.5e-24 117.9 180 45.0
VMungo0331G0161 Vigna mungo HOM05D003555 ORTHO05D004542 1.5e-24 117.9 98 62.2
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.6e-23 114.4 126 47.6
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 2.9e-20 103.6 67 71.6
C02p56920 Brassica napus HOM05D003555 ORTHO05D040056 3.4e-13 80.1 73 56.2
VMungo0251G2278 Vigna mungo HOM05D003555 ORTHO05D001686 1.7e-12 77.8 116 41.4
THA.LOC104805959 Tarenaya hassleriana HOM05D003555 ORTHO05D022543 3.8e-12 76.6 44 79.5
BcaC03g17683 Brassica carinata HOM05D003555 ORTHO05D040056 8.5e-12 75.5 70 54.3
Duzib114G0355 Durio zibethinus HOM05D003555 ORTHO05D186121 2.5e-08 63.9 41 73.2


User provided reference genes

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