Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 1.4e-223 779.2 381 100.0
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 5.3e-223 777.3 381 99.7
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 9.2e-167 590.5 387 72.9
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 6.0e-166 587.8 387 72.9
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 7.8e-166 587.4 387 72.1
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 1.7e-165 586.3 383 72.6
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.3e-165 585.9 387 72.4
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 3.9e-165 585.1 384 72.1
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 3.9e-165 585.1 387 72.1
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 8.6e-165 583.9 385 71.9
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 1.9e-164 582.8 383 72.6
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 4.3e-164 581.6 384 71.4
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 1.6e-163 579.7 383 72.1
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 2.8e-163 578.9 384 72.4
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 2.8e-163 578.9 385 71.4
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 1.1e-162 577.0 382 71.2
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 1.1e-162 577.0 385 71.9
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.4e-162 576.6 383 71.5
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 1.8e-162 576.2 384 71.1
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 4.0e-162 575.1 385 71.2
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 4.0e-162 575.1 384 71.1
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 4.0e-162 575.1 383 71.3
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 6.8e-162 574.3 382 70.9
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 1.2e-161 573.5 384 71.6
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 2.6e-161 572.4 384 71.9
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 5.8e-161 571.2 385 71.2
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 5.8e-161 571.2 384 71.4
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 9.9e-161 570.5 383 71.3
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 2.2e-160 569.3 383 70.5
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 3.8e-160 568.5 384 71.1
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 8.4e-160 567.4 376 71.5
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 1.4e-159 566.6 383 69.5
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 1.4e-159 566.6 384 70.8
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.4e-159 566.6 384 70.8
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.4e-159 566.6 383 71.5
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.9e-159 566.2 384 70.6
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 1.9e-159 566.2 383 70.5
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 2.4e-159 565.8 384 69.8
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 5.4e-159 564.7 370 73.0
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 5.4e-159 564.7 382 69.9
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 1.2e-158 563.5 383 70.5
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 1.6e-158 563.1 384 69.8
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 2.1e-158 562.8 382 70.7
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 3.5e-158 562.0 371 72.0
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 6.0e-158 561.2 384 69.3
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 6.0e-158 561.2 383 71.3
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 6.0e-158 561.2 383 71.0
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 7.8e-158 560.8 381 70.1
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 1.0e-157 560.5 372 71.0
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 1.0e-157 560.5 384 69.8
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 2.3e-157 559.3 386 69.2
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 3.0e-157 558.9 383 70.8
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 3.9e-157 558.5 382 68.3
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 3.9e-157 558.5 340 76.2
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 5.1e-157 558.1 384 69.5
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 6.6e-157 557.8 369 71.5
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 8.7e-157 557.4 384 69.3
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 8.7e-157 557.4 383 70.8
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.1e-156 557.0 383 70.5
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 1.5e-156 556.6 383 70.0
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 2.5e-156 555.8 382 69.1
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 2.5e-156 555.8 383 70.2
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 2.5e-156 555.8 383 71.3
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 3.3e-156 555.4 371 70.1
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 3.3e-156 555.4 384 70.3
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 3.3e-156 555.4 350 74.6
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 3.3e-156 555.4 383 71.3
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 3.3e-156 555.4 382 69.6
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 9.6e-156 553.9 384 68.8
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 1.2e-155 553.5 384 68.0
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 1.6e-155 553.1 383 70.2
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 2.8e-155 552.4 383 69.5
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 3.6e-155 552.0 382 69.1
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 8.1e-155 550.8 383 69.5
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.4e-154 550.1 382 69.4
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 1.4e-154 550.1 384 67.4
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 3.1e-154 548.9 383 69.2
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 3.1e-154 548.9 382 68.8
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 4.0e-154 548.5 382 68.8
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 5.3e-154 548.1 382 68.3
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 2.0e-153 546.2 387 68.5
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 2.6e-153 545.8 382 68.6
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 3.4e-153 545.4 384 66.9
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 5.8e-153 544.7 382 66.8
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 9.9e-153 543.9 382 67.8
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 1.3e-152 543.5 382 68.1
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 1.3e-152 543.5 382 66.2
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 2.9e-152 542.3 384 66.4
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 4.9e-152 541.6 384 66.9
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 8.4e-152 540.8 383 66.3
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 1.1e-151 540.4 384 66.9
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.1e-151 540.4 387 68.5
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 3.2e-151 538.9 382 67.5
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 9.3e-151 537.3 384 66.1
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.7e-150 535.8 369 69.4
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 1.7e-149 533.1 385 67.0
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 1.9e-148 529.6 383 67.6
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 2.5e-148 529.3 382 66.0
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 2.5e-148 529.3 382 66.5
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 4.3e-148 528.5 383 66.3
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 5.6e-148 528.1 382 65.4
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 1.3e-147 526.9 385 67.0
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 2.4e-146 522.7 383 65.8
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 2.4e-146 522.7 384 66.1
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 2.4e-146 522.7 387 65.9
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 6.9e-146 521.2 384 66.1
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 6.9e-146 521.2 382 66.2
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 1.2e-145 520.4 379 64.1
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.5e-145 520.0 383 66.3
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 3.4e-145 518.8 383 65.8
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 2.9e-144 515.8 384 66.4
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 4.2e-143 511.9 383 65.8
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 7.1e-143 511.1 383 65.3
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 1.2e-142 510.4 384 64.3
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 6.7e-141 504.6 383 65.0
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 1.3e-139 500.4 385 64.2
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 1.1e-135 487.3 385 60.8
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 3.5e-134 482.3 384 61.2
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 8.4e-128 461.1 345 62.6
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 6.3e-123 444.9 358 63.7
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 7.7e-121 438.0 384 56.8
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 5.0e-120 435.3 387 54.8
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 3.6e-118 429.1 385 54.3
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 1.1e-114 417.5 258 76.0
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 1.6e-110 403.7 288 66.7
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 2.1e-110 403.3 394 49.5
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 1.8e-98 363.6 389 48.6
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 4.4e-92 342.4 261 64.4
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 6.3e-83 312.0 205 74.1
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.4e-82 308.9 360 47.2
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 3.8e-80 302.8 378 47.1
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 5.7e-76 288.9 358 43.3
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 6.3e-75 285.4 251 55.4
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 3.9e-72 276.2 248 58.1
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 1.9e-71 273.9 337 43.0
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 3.7e-67 259.6 326 41.1
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 3.3e-63 246.5 330 43.6
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 1.5e-60 237.7 228 54.8
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 3.3e-39 166.8 353 32.6
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 2.8e-38 163.7 264 39.8
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 5.3e-29 132.9 396 25.3
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 2.7e-17 94.0 92 58.7
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 2.2e-11 74.3 91 46.2


User provided reference genes

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