Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 2.0e-192 675.6 347 100.0
HPP92_022533 Vanilla planifolia HOM05D004721 ORTHO05D005765 1.2e-88 330.9 170 98.8
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 3.2e-73 279.6 264 57.6
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 5.4e-73 278.9 251 57.0
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 6.0e-72 275.4 248 59.3
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.3e-71 274.2 229 63.3
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 2.3e-71 273.5 236 59.7
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 3.9e-71 272.7 296 53.0
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 6.6e-71 271.9 287 52.3
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.5e-70 270.8 233 60.1
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 2.5e-70 270.0 269 55.0
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.5e-70 270.0 209 62.7
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 3.3e-70 269.6 247 57.5
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 3.3e-70 269.6 272 54.0
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 3.3e-70 269.6 189 68.8
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 4.3e-70 269.2 253 57.7
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 5.6e-70 268.9 320 50.0
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 7.3e-70 268.5 249 56.6
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 7.3e-70 268.5 292 51.0
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.1e-69 266.9 274 54.0
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 2.1e-69 266.9 182 70.9
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 2.8e-69 266.5 205 63.9
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 4.7e-69 265.8 274 54.0
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 4.7e-69 265.8 242 56.2
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 6.2e-69 265.4 206 65.5
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 6.2e-69 265.4 287 54.7
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 6.2e-69 265.4 277 53.4
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 1.1e-68 264.6 244 57.4
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.1e-68 264.6 271 53.9
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.1e-68 264.6 226 59.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.1e-68 264.6 238 59.7
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.1e-68 264.6 205 63.9
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.8e-68 263.8 176 72.7
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.4e-68 263.5 205 64.4
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 2.4e-68 263.5 200 64.0
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 5.2e-68 262.3 268 53.7
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 5.2e-68 262.3 205 63.4
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 6.8e-68 261.9 187 70.1
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 6.8e-68 261.9 182 70.3
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 6.8e-68 261.9 269 52.4
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 6.8e-68 261.9 186 68.8
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 6.8e-68 261.9 273 52.7
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.2e-67 261.2 244 58.2
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.5e-67 260.8 271 52.8
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.5e-67 260.8 224 59.4
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 2.0e-67 260.4 189 67.7
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.0e-67 260.4 205 63.4
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 2.6e-67 260.0 207 59.9
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 2.6e-67 260.0 207 59.9
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 3.4e-67 259.6 236 58.1
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 3.4e-67 259.6 269 52.0
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 3.4e-67 259.6 266 52.6
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 4.4e-67 259.2 262 55.3
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 4.4e-67 259.2 205 62.9
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 5.8e-67 258.8 255 56.5
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 7.6e-67 258.5 200 65.0
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 9.9e-67 258.1 269 51.7
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 1.3e-66 257.7 247 55.1
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 2.2e-66 256.9 229 59.4
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.9e-66 256.5 230 60.4
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.9e-66 256.5 290 50.0
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 2.9e-66 256.5 186 67.7
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.8e-66 256.1 290 50.0
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 3.8e-66 256.1 261 52.9
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 3.8e-66 256.1 242 57.4
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 6.4e-66 255.4 222 58.6
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 6.4e-66 255.4 232 59.5
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 1.1e-65 254.6 189 66.1
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.4e-65 254.2 214 62.6
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 2.4e-65 253.4 243 55.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 4.2e-65 252.7 261 54.4
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.4e-65 252.3 306 48.7
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 7.1e-65 251.9 219 60.7
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 7.1e-65 251.9 254 53.1
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 9.3e-65 251.5 175 69.1
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 9.3e-65 251.5 294 51.4
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 9.3e-65 251.5 262 54.6
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 9.3e-65 251.5 209 61.2
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 9.3e-65 251.5 229 59.0
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.6e-64 250.8 261 51.7
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 3.5e-64 249.6 246 55.3
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 6.0e-64 248.8 253 54.2
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.0e-63 248.1 205 63.4
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 1.7e-63 247.3 255 56.5
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.3e-63 246.9 291 50.2
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 8.7e-63 245.0 234 56.0
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.1e-62 244.6 239 55.2
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.5e-62 244.2 216 60.6
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.5e-62 244.2 249 53.8
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 2.5e-62 243.4 229 57.6
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 5.6e-62 242.3 198 63.1
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 7.3e-62 241.9 258 52.3
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 2.1e-61 240.4 206 59.7
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 2.1e-61 240.4 301 46.2
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 3.6e-61 239.6 199 61.8
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 8.1e-61 238.4 226 58.0
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.1e-60 238.0 234 56.0
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.1e-60 238.0 234 56.0
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.1e-60 238.0 290 46.6
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.8e-60 237.3 237 55.3
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.8e-60 237.3 229 58.5
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 2.4e-60 236.9 228 56.6
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 2.4e-60 236.9 221 57.9
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 2.4e-60 236.9 221 57.9
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 5.3e-60 235.7 280 48.9
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 9.0e-60 235.0 263 52.1
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.2e-59 234.6 187 62.6
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 2.6e-59 233.4 235 55.7
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.7e-58 230.7 204 58.8
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 2.9e-58 229.9 281 45.6
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 2.5e-54 216.9 240 50.0
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 9.0e-52 208.4 150 68.7
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.1e-49 201.4 247 47.0
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 3.2e-49 199.9 247 48.6
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.2e-48 198.0 179 56.4
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 2.1e-48 197.2 165 58.2
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.1e-48 197.2 209 53.1
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 9.6e-46 188.3 121 72.7
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.1e-41 174.9 103 77.7
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 5.9e-27 125.9 76 75.0
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 4.2e-25 119.8 79 67.1
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 2.7e-16 90.5 62 71.0
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 5.9e-11 72.8 61 57.4


User provided reference genes

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