Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022394 Vanilla planifolia HOM05D001032 ORTHO05D000907 1.9e-90 335.9 175 100.0
HPP92_022271 Vanilla planifolia HOM05D001032 ORTHO05D000907 7.4e-79 297.4 195 84.6
Zm00001eb318920 Zea mays HOM05D001032 ORTHO05D000907 4.7e-17 92.0 203 38.9
Oeu062010.1 Olea europaea HOM05D001032 ORTHO05D000907 3.7e-14 82.4 233 31.8
TWI59G0587 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 4.9e-14 82.0 241 33.2
MBI12_g31185_MAGBIO Magnolia biondii HOM05D001032 ORTHO05D000907 8.4e-14 81.3 259 33.2
Phvul.010G092300 Phaseolus vulgaris HOM05D001032 ORTHO05D000907 3.2e-13 79.3 241 32.8
VMungo0331G0030 Vigna mungo HOM05D001032 ORTHO05D000907 5.4e-13 78.6 241 32.4
Potri.002G153500 Populus trichocarpa HOM05D001032 ORTHO05D000907 9.2e-13 77.8 241 34.9
Oeu059232.1 Olea europaea HOM05D001032 ORTHO05D000907 1.2e-12 77.4 255 31.0
Gohir.A12G103800 Gossypium hirsutum HOM05D001032 ORTHO05D000907 1.6e-12 77.0 121 44.6
Gorai.008G116800 Gossypium raimondii HOM05D001032 ORTHO05D000907 1.6e-12 77.0 121 44.6
Gohir.D12G107300 Gossypium hirsutum HOM05D001032 ORTHO05D000907 3.5e-12 75.9 143 41.3
PGR031G2271 Punica granatum HOM05D001032 ORTHO05D000907 6.0e-12 75.1 125 44.8
COL.COLO4_12622 Corchorus olitorius HOM05D001032 ORTHO05D000907 7.8e-12 74.7 128 40.6
Oeu024413.1 Olea europaea HOM05D001032 ORTHO05D000907 1.3e-11 73.9 272 30.1
Glyma.07G078600 Glycine max HOM05D001032 ORTHO05D000907 1.7e-11 73.6 259 31.7
RcHm_v2.0_Chr4g0401791 Rosa chinensis HOM05D001032 ORTHO05D000907 1.7e-11 73.6 141 39.7
MD13G1252600 Malus domestica HOM05D001032 ORTHO05D000907 2.3e-11 73.2 146 39.0
DCAR_016007 Daucus carota HOM05D001032 ORTHO05D000907 3.0e-11 72.8 135 41.5
Dinv32424 Davidia involucrata HOM05D001032 ORTHO05D000907 3.9e-11 72.4 128 39.1
Lj3g0001330 Lotus japonicus HOM05D001032 ORTHO05D000907 3.9e-11 72.4 132 41.7
Manes.05G040000 Manihot esculenta HOM05D001032 ORTHO05D000907 3.9e-11 72.4 273 31.1
Potri.014G076702 Populus trichocarpa HOM05D001032 ORTHO05D000907 3.9e-11 72.4 130 40.8
MELO3C006149.2 Cucumis melo HOM05D001032 ORTHO05D000907 5.1e-11 72.0 224 33.9
Lj7P519T38 Lonicera japonica HOM05D001032 ORTHO05D000907 5.1e-11 72.0 140 40.7
Thecc.01G368300 Theobroma cacao HOM05D001032 ORTHO05D000907 5.1e-11 72.0 127 41.7
HanXRQChr11g0321881 Helianthus annuus HOM05D001032 ORTHO05D000907 6.6e-11 71.6 115 40.9
CsaV3_3G009290 Cucumis sativus L. HOM05D001032 ORTHO05D000907 8.6e-11 71.2 221 32.6
Duzib138G1589 Durio zibethinus HOM05D001032 ORTHO05D000907 8.6e-11 71.2 127 40.2
FvH4_4g08080 Fragaria vesca HOM05D001032 ORTHO05D000907 8.6e-11 71.2 165 38.8
FAN12G2418 Fragaria x ananassa HOM05D001032 ORTHO05D000907 8.6e-11 71.2 165 38.8
FAN17G2786 Fragaria x ananassa HOM05D001032 ORTHO05D000907 8.6e-11 71.2 165 38.8
MD16G1256800 Malus domestica HOM05D001032 ORTHO05D000907 8.6e-11 71.2 160 36.9
Medtr8g032610 Medicago truncatula HOM05D001032 ORTHO05D000907 1.1e-10 70.9 271 31.0
TWI14G0022 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 1.1e-10 70.9 133 41.4
CANSAT56G0460 Cannabis sativa HOM05D001032 ORTHO05D000907 1.5e-10 70.5 150 38.0
CAN.G170.49 Capsicum annuum HOM05D001032 ORTHO05D000907 1.9e-10 70.1 127 40.9
Haze_15223 Corylus avellana HOM05D001032 ORTHO05D000907 1.9e-10 70.1 128 42.2
Duzib133G0095 Durio zibethinus HOM05D001032 ORTHO05D000907 1.9e-10 70.1 127 40.9
HanXRQChr06g0169141 Helianthus annuus HOM05D001032 ORTHO05D000907 1.9e-10 70.1 119 44.5
Manes.01G262100 Manihot esculenta HOM05D001032 ORTHO05D000907 1.9e-10 70.1 263 30.8
Prupe.1G084800 Prunus persica HOM05D001032 ORTHO05D000907 1.9e-10 70.1 160 36.9
Cfa004185 Carpinus fangiana HOM05D001032 ORTHO05D000907 2.5e-10 69.7 143 40.6
Ca_23762_v3 Cicer arietinum L. HOM05D001032 ORTHO05D000907 2.5e-10 69.7 154 37.7
QL08p050603 Quercus lobata HOM05D001032 ORTHO05D000907 2.5e-10 69.7 127 39.4
Sabra14G0055600 Salix brachista HOM05D001628 ORTHO05D001568 2.5e-10 69.7 130 40.8
Ciclev10023764m.g Citrus clementina HOM05D001032 ORTHO05D000907 3.3e-10 69.3 162 35.2
FAN22G1687 Fragaria x ananassa HOM05D001032 ORTHO05D000907 3.3e-10 69.3 141 39.7
Lj1g0027460 Lotus japonicus HOM05D001032 ORTHO05D000907 3.3e-10 69.3 221 31.2
Nitab4.5_0022145g0010 Nicotiana tabacum HOM05D001032 ORTHO05D000907 5.6e-10 68.6 126 38.9
SalBow3G0956 Salvia bowleyana HOM05D001032 ORTHO05D000907 7.3e-10 68.2 140 40.0
PGSC0003DMG400017051 Solanum tuberosum HOM05D001032 ORTHO05D000907 7.3e-10 68.2 148 36.5
Cpa.g.sc18.194 Carica papaya HOM05D001032 ORTHO05D000907 9.6e-10 67.8 125 40.0
Migut.B01690 Erythranthe guttata HOM05D001032 ORTHO05D000907 9.6e-10 67.8 143 36.4
Lsat_1_v5_gn_7_5961 Lactuca sativa HOM05D001032 ORTHO05D000907 9.6e-10 67.8 120 40.8
TAR003G0009 Trochodendron aralioides HOM05D001032 ORTHO05D000907 9.6e-10 67.8 135 40.7
Peaxi162Scf00021g00069 Petunia axillaris HOM05D001032 ORTHO05D000907 1.2e-09 67.4 132 38.6
Sopen01g037540 Solanum pennellii HOM05D001032 ORTHO05D000907 1.2e-09 67.4 123 38.2
ATR0757G077 Amborella trichopoda HOM05D001032 ORTHO05D000907 1.6e-09 67.0 167 34.7
Aqoxy7G00449 Aquilegia oxysepala HOM05D001032 ORTHO05D000907 2.1e-09 66.6 248 27.4
Solyc01g091760.3 Solanum lycopersicum HOM05D001032 ORTHO05D000907 2.1e-09 66.6 131 37.4
arahy.Tifrunner.gnm1.ann1.RCQ4HC Arachis hypogaea HOM05D001032 ORTHO05D000907 2.8e-09 66.2 134 38.8
MSTRG.20793 Avicennia marina HOM05D001032 ORTHO05D000907 3.6e-09 65.9 148 36.5
TAR636G0403 Trochodendron aralioides HOM05D001032 ORTHO05D000907 3.6e-09 65.9 151 37.1
Sed0022795 Sechium edule HOM05D001032 ORTHO05D000907 4.7e-09 65.5 133 42.9
Nitab4.5_0004550g0050 Nicotiana tabacum HOM05D001032 ORTHO05D000907 8.1e-09 64.7 278 28.8
ClCG05G001890 Citrullus lanatus HOM05D001032 ORTHO05D000907 1.1e-08 64.3 126 42.1
FAN07G0374 Fragaria x ananassa HOM05D001032 ORTHO05D000907 1.1e-08 64.3 166 34.9
PSO478G2621 Papaver somniferum HOM05D001032 ORTHO05D000907 2.4e-08 63.2 133 37.6
CiPaw.01G053900 Carya illinoinensis HOM05D001032 ORTHO05D000907 4.0e-08 62.4 142 40.1
PSO782G2475 Papaver somniferum HOM05D001032 ORTHO05D000907 4.0e-08 62.4 138 37.7
CiPaw.16G082400 Carya illinoinensis HOM05D001032 ORTHO05D000907 5.2e-08 62.0 187 32.1
arahy.Tifrunner.gnm1.ann1.20QC9Q Arachis hypogaea HOM05D001032 ORTHO05D000907 1.2e-07 60.8 121 38.0
RcHm_v2.0_Chr7g0187951 Rosa chinensis HOM05D001032 ORTHO05D000907 1.2e-07 60.8 79 50.6
Atru.chr5.407 Acer truncatum HOM05D001032 ORTHO05D000907 2.0e-07 60.1 139 34.5
ECA236G2525 Erigeron canadensis HOM05D001032 ORTHO05D000907 2.0e-07 60.1 143 37.1
Nn3g17647 Nelumbo nucifera HOM05D001032 ORTHO05D000907 3.4e-07 59.3 186 32.3
Gohir.A08G114100 Gossypium hirsutum HOM05D001032 ORTHO05D000907 4.4e-07 58.9 64 54.7
Gohir.D08G121200 Gossypium hirsutum HOM05D001032 ORTHO05D000907 4.4e-07 58.9 64 54.7
Gorai.004G127900 Gossypium raimondii HOM05D001032 ORTHO05D000907 4.4e-07 58.9 64 54.7
Lj6g0010489 Lotus japonicus HOM05D000028 ORTHO05D001812 4.4e-07 58.9 68 52.9
MD00G1118900 Malus domestica HOM05D001032 ORTHO05D000907 4.4e-07 58.9 74 50.0
Ca_00462_v3 Cicer arietinum L. HOM05D001032 ORTHO05D000907 5.8e-07 58.5 76 50.0
COL.COLO4_10854 Corchorus olitorius HOM05D001032 ORTHO05D000907 5.8e-07 58.5 74 51.4
Hma1.2p1_0398F.1_g143870 Hydrangea macrophylla HOM05D001032 ORTHO05D000907 5.8e-07 58.5 111 41.4
Manes.01G000062 Manihot esculenta HOM05D001032 ORTHO05D000907 5.8e-07 58.5 63 54.0
Medtr2g016730 Medicago truncatula HOM05D001032 ORTHO05D000907 5.8e-07 58.5 71 52.1
Psat1g195480 Pisum sativum HOM05D001032 ORTHO05D000907 5.8e-07 58.5 71 52.1
CSS0022828 Camellia sinensis var. sinensis HOM05D001032 ORTHO05D000907 7.6e-07 58.2 67 47.8
CSS0037417 Camellia sinensis var. sinensis HOM05D001032 ORTHO05D000907 7.6e-07 58.2 67 47.8
Gohir.A12G243250 Gossypium hirsutum HOM05D001032 ORTHO05D000907 7.6e-07 58.2 66 53.0
PGR042G2151 Punica granatum HOM05D001032 ORTHO05D000907 7.6e-07 58.2 129 35.7
Cpa.g.sc62.63 Carica papaya HOM05D001032 ORTHO05D000907 9.9e-07 57.8 65 52.3
Haze_09223 Corylus avellana HOM05D001032 ORTHO05D000020 9.9e-07 57.8 80 47.5
FAN08G0361 Fragaria x ananassa HOM05D001032 ORTHO05D000907 9.9e-07 57.8 73 49.3
Phvul.006G173500 Phaseolus vulgaris HOM05D001032 ORTHO05D000907 9.9e-07 57.8 91 42.9
Psat0s4340g0040 Pisum sativum HOM05D001032 ORTHO05D000907 9.9e-07 57.8 74 45.9
SEGI_32364 Sequoiadendron giganteum HOM05D001032 ORTHO05D000907 9.9e-07 57.8 68 50.0
TPR.G4488 Trifolium pratense HOM05D001032 ORTHO05D000907 9.9e-07 57.8 92 45.7
ATR0691G176 Amborella trichopoda HOM05D001032 ORTHO05D000907 1.3e-06 57.4 76 47.4
CANSAT21G0531 Cannabis sativa HOM05D001032 ORTHO05D000907 1.3e-06 57.4 69 50.7
CAN.G438.111 Capsicum annuum HOM05D001032 ORTHO05D000907 1.3e-06 57.4 69 53.6
FvH4_5g10260 Fragaria vesca HOM05D001032 ORTHO05D000907 1.3e-06 57.4 63 54.0
FAN13G2013 Fragaria x ananassa HOM05D001032 ORTHO05D000907 1.3e-06 57.4 63 54.0
FAN18G2384 Fragaria x ananassa HOM05D001032 ORTHO05D000907 1.3e-06 57.4 63 54.0
Gorai.008G261800 Gossypium raimondii HOM05D001032 ORTHO05D000907 1.3e-06 57.4 63 54.0
Lsat_1_v5_gn_5_31460 Lactuca sativa HOM05D001032 ORTHO05D000020 1.3e-06 57.4 68 51.5
Nitab4.5_0000410g0120 Nicotiana tabacum HOM05D001032 ORTHO05D000907 1.3e-06 57.4 76 51.3
Nitab4.5_0003716g0080 Nicotiana tabacum HOM05D001032 ORTHO05D000907 1.3e-06 57.4 69 53.6
Peaxi162Scf00015g00067 Petunia axillaris HOM05D001032 ORTHO05D000907 1.3e-06 57.4 69 53.6
Potri.001G453100 Populus trichocarpa HOM05D001032 ORTHO05D000907 1.3e-06 57.4 63 54.0
Solyc03g119800.3 Solanum lycopersicum HOM05D001032 ORTHO05D000907 1.3e-06 57.4 69 53.6
Sopen03g038650 Solanum pennellii HOM05D001032 ORTHO05D000907 1.3e-06 57.4 69 53.6
PGSC0003DMG400005621 Solanum tuberosum HOM05D001032 ORTHO05D000907 1.3e-06 57.4 69 53.6
Thecc.03G214800 Theobroma cacao HOM05D001032 ORTHO05D000907 1.3e-06 57.4 63 54.0
Actinidia26237 Actinidia chinensis HOM05D001032 ORTHO05D000907 1.7e-06 57.0 105 40.0
Actinidia27275 Actinidia chinensis HOM05D001032 ORTHO05D000907 1.7e-06 57.0 63 54.0
Cfa011881 Carpinus fangiana HOM05D001032 ORTHO05D000907 1.7e-06 57.0 65 52.3
Dinv30678 Davidia involucrata HOM05D001032 ORTHO05D000907 1.7e-06 57.0 78 46.2
Dinv34338 Davidia involucrata HOM05D001032 ORTHO05D000907 1.7e-06 57.0 78 46.2
Glyma.13G227066 Glycine max HOM05D001032 ORTHO05D000907 1.7e-06 57.0 79 49.4
Peaxi162Scf00017g03011 Petunia axillaris HOM05D001032 ORTHO05D000020 1.7e-06 57.0 78 44.9
Prupe.5G136200 Prunus persica HOM05D001032 ORTHO05D000907 1.7e-06 57.0 63 54.0
RcHm_v2.0_Chr7g0184251 Rosa chinensis HOM05D001032 ORTHO05D000907 1.7e-06 57.0 69 47.8
VMungo0540G2400 Vigna mungo HOM05D001032 ORTHO05D000907 1.7e-06 57.0 87 44.8
GSVIVG01019717001 Vitis vinifera HOM05D000028 ORTHO05D001812 1.7e-06 57.0 63 54.0
Atru.chr9.1825 Acer truncatum HOM05D001032 ORTHO05D000907 2.2e-06 56.6 72 50.0
Aqoxy7G01795 Aquilegia oxysepala HOM05D001032 ORTHO05D000907 2.2e-06 56.6 63 54.0
Ciclev10022187m.g Citrus clementina HOM05D001032 ORTHO05D000020 2.2e-06 56.6 74 44.6
Ciclev10023360m.g Citrus clementina HOM05D001032 ORTHO05D000907 2.2e-06 56.6 73 49.3
Dinv18628 Davidia involucrata HOM05D001032 ORTHO05D000907 2.2e-06 56.6 61 52.5
Dinv26244 Davidia involucrata HOM05D001032 ORTHO05D000907 2.2e-06 56.6 61 52.5
Glyma.15G085400 Glycine max HOM05D001032 ORTHO05D000907 2.2e-06 56.6 74 47.3
Prupe.5G213800 Prunus persica HOM05D001032 ORTHO05D000907 2.2e-06 56.6 57 54.4
ATR0730G089 Amborella trichopoda HOM05D001032 ORTHO05D000907 2.9e-06 56.2 105 45.7
CiPaw.11G107800 Carya illinoinensis HOM05D001032 ORTHO05D000907 2.9e-06 56.2 68 51.5
Duzib084G0463 Durio zibethinus HOM05D001032 ORTHO05D000907 2.9e-06 56.2 57 54.4
Eucgr.J01042 Eucalyptus grandis HOM05D001032 ORTHO05D000907 2.9e-06 56.2 63 52.4
MD06G1125700 Malus domestica HOM05D001032 ORTHO05D000907 2.9e-06 56.2 83 45.8
QL10p022138 Quercus lobata HOM05D001032 ORTHO05D000907 2.9e-06 56.2 118 38.1
SEGI_05447 Sequoiadendron giganteum HOM05D001032 ORTHO05D000907 2.9e-06 56.2 92 43.5
Zm00001eb302890 Zea mays HOM05D001032 ORTHO05D000907 2.9e-06 56.2 63 50.8
arahy.Tifrunner.gnm1.ann1.L32FWB Arachis hypogaea HOM05D001032 ORTHO05D000907 3.8e-06 55.8 63 52.4
arahy.Tifrunner.gnm1.ann1.ZH29RS Arachis hypogaea HOM05D001032 ORTHO05D000907 3.8e-06 55.8 63 52.4
DCAR_025470 Daucus carota HOM05D001032 ORTHO05D000907 3.8e-06 55.8 122 35.2
Gohir.D12G244250 Gossypium hirsutum HOM05D001032 ORTHO05D000907 3.8e-06 55.8 61 54.1
Peaxi162Scf00629g00021 Petunia axillaris HOM05D001032 ORTHO05D000907 3.8e-06 55.8 123 35.8
Sed0026369 Sechium edule HOM05D001032 ORTHO05D000020 3.8e-06 55.8 86 43.0
SMO119G0418 Selaginella moellendorffii HOM05D001032 ORTHO05D000907 3.8e-06 55.8 103 40.8
TAR636G0514 Trochodendron aralioides HOM05D001032 ORTHO05D000907 3.8e-06 55.8 68 50.0
BolC2t06981H Brassica oleracea HOM05D001032 ORTHO05D000907 4.9e-06 55.5 81 40.7
CsaV3_5G001400 Cucumis sativus L. HOM05D001032 ORTHO05D000020 4.9e-06 55.5 63 50.8
Duzib205G1325 Durio zibethinus HOM05D001032 ORTHO05D000907 4.9e-06 55.5 79 45.6
Migut.F00403 Erythranthe guttata HOM05D001032 ORTHO05D000907 4.9e-06 55.5 63 52.4
FAN04G3229 Fragaria x ananassa HOM05D001032 ORTHO05D000907 4.9e-06 55.5 63 52.4
FAN13G0656 Fragaria x ananassa HOM05D001032 ORTHO05D000907 4.9e-06 55.5 81 44.4
MD14G1219100 Malus domestica HOM05D001032 ORTHO05D000907 4.9e-06 55.5 194 29.4
Manes.08G145400 Manihot esculenta HOM05D001032 ORTHO05D000907 4.9e-06 55.5 64 48.4
Oeu027133.1 Olea europaea HOM05D001032 ORTHO05D000907 4.9e-06 55.5 67 50.7
Os07g0204000 Oryza sativa ssp. japonica HOM05D001032 ORTHO05D000907 4.9e-06 55.5 71 45.1
Pp3c25_1760 Physcomitrium patens HOM05D001032 ORTHO05D000907 4.9e-06 55.5 60 53.3
Pp3c6_14880 Physcomitrium patens HOM05D001032 ORTHO05D000020 4.9e-06 55.5 57 54.4
Psat7g135600 Pisum sativum HOM05D001032 ORTHO05D000907 4.9e-06 55.5 61 52.5
SalBow5G0275 Salvia bowleyana HOM05D001032 ORTHO05D000907 4.9e-06 55.5 63 52.4
Cfa009568 Carpinus fangiana HOM05D001032 ORTHO05D000907 6.4e-06 55.1 74 45.9
COL.COLO4_32172 Corchorus olitorius HOM05D001032 ORTHO05D000907 6.4e-06 55.1 201 29.4
Lsat_1_v5_gn_1_41980 Lactuca sativa HOM05D001032 ORTHO05D000907 6.4e-06 55.1 63 49.2
TPR.G2801 Trifolium pratense HOM05D001032 ORTHO05D000020 6.4e-06 55.1 79 41.8
CiPaw.02G024900 Carya illinoinensis HOM05D001032 ORTHO05D000907 8.4e-06 54.7 73 52.1
Cc04_g07770 Coffea canephora HOM05D001032 ORTHO05D000020 8.4e-06 54.7 174 32.2
MELO3C017272.2 Cucumis melo HOM05D001032 ORTHO05D000907 8.4e-06 54.7 77 45.5
Duzib177G0057 Durio zibethinus HOM05D001032 ORTHO05D000907 8.4e-06 54.7 64 48.4
Migut.J01881 Erythranthe guttata HOM05D001032 ORTHO05D000907 8.4e-06 54.7 64 48.4
Lj4g0018845 Lotus japonicus HOM05D001032 ORTHO05D000907 8.4e-06 54.7 194 31.4
TWI15G1045 Tripterygium wilfordii HOM05D001032 ORTHO05D000907 8.4e-06 54.7 77 44.2
VMungo1215G3269 Vigna mungo HOM05D001032 ORTHO05D000020 8.4e-06 54.7 87 42.5
Zm00001eb107500 Zea mays HOM05D001032 ORTHO05D000907 8.4e-06 54.7 79 41.8
Zm00001eb325260 Zea mays HOM05D001032 ORTHO05D000907 8.4e-06 54.7 79 41.8


User provided reference genes

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