Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.6e-132 476.1 240 100.0
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 3.9e-131 471.5 240 99.2
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 7.8e-55 218.0 214 57.0
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 7.8e-55 218.0 214 56.5
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.7e-54 216.9 166 63.3
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 3.0e-54 216.1 168 63.7
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 6.6e-54 214.9 212 55.7
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.9e-53 213.4 190 58.4
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 3.3e-53 212.6 188 59.6
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 9.6e-53 211.1 173 64.7
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.6e-52 210.3 184 59.2
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 2.8e-52 209.5 178 59.6
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.8e-52 208.8 218 49.5
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.1e-51 207.6 193 57.5
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.4e-51 207.2 170 60.6
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 1.8e-51 206.8 178 57.3
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 2.4e-51 206.5 171 62.0
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 5.3e-51 205.3 216 51.9
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 6.9e-51 204.9 208 54.3
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.2e-50 204.1 183 57.4
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 2.0e-50 203.4 168 59.5
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 4.5e-50 202.2 215 52.6
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 1.3e-49 200.7 164 62.2
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 1.3e-49 200.7 171 62.0
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.7e-49 200.3 222 51.8
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 2.9e-49 199.5 198 53.5
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 4.9e-49 198.7 221 52.0
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.4e-48 197.2 175 57.1
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 5.4e-48 195.3 169 56.8
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 7.1e-48 194.9 187 55.6
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 7.1e-48 194.9 163 60.1
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 7.1e-48 194.9 180 56.1
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 1.2e-47 194.1 223 49.8
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.6e-47 193.7 178 53.9
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 2.7e-47 193.0 184 53.3
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 2.7e-47 193.0 193 52.8
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 3.5e-47 192.6 196 53.6
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 4.6e-47 192.2 234 48.3
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 6.0e-47 191.8 193 51.3
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 7.9e-47 191.4 179 55.3
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 7.9e-47 191.4 183 54.1
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.0e-46 191.0 185 54.1
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 1.3e-46 190.7 208 52.4
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.8e-46 190.3 220 49.1
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 1.8e-46 190.3 168 56.5
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 1.8e-46 190.3 234 47.4
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 2.3e-46 189.9 160 58.1
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 3.0e-46 189.5 163 57.7
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 3.9e-46 189.1 182 54.4
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 5.1e-46 188.7 156 56.4
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 8.7e-46 188.0 216 47.2
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.5e-45 187.2 168 56.5
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.5e-45 187.2 128 68.0
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 1.9e-45 186.8 131 67.9
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 4.3e-45 185.7 187 54.0
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 5.6e-45 185.3 160 55.6
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 5.6e-45 185.3 156 55.1
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 7.4e-45 184.9 190 51.1
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 1.3e-44 184.1 185 52.4
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 1.6e-44 183.7 188 52.7
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 3.7e-44 182.6 185 53.5
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 3.7e-44 182.6 178 55.6
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 4.8e-44 182.2 216 50.0
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 4.8e-44 182.2 184 51.6
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 4.8e-44 182.2 164 54.9
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 6.2e-44 181.8 182 53.3
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 1.8e-43 180.3 156 57.7
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 2.4e-43 179.9 156 58.3
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 6.9e-43 178.3 185 53.0
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 2.0e-42 176.8 185 49.7
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 2.0e-42 176.8 180 51.7
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 2.0e-42 176.8 197 50.3
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 2.6e-42 176.4 239 46.0
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 2.6e-42 176.4 133 66.2
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 3.4e-42 176.0 202 51.0
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 5.8e-42 175.3 169 50.9
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 5.8e-42 175.3 145 64.1
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 7.6e-42 174.9 168 51.8
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 1.7e-41 173.7 185 53.5
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 2.9e-41 172.9 139 56.8
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 2.9e-41 172.9 145 62.8
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 6.4e-41 171.8 146 55.5
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 6.4e-41 171.8 146 55.5
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 8.4e-41 171.4 131 61.8
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 1.1e-40 171.0 154 53.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 1.4e-40 170.6 145 55.9
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 1.4e-40 170.6 154 53.9
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.4e-40 169.9 165 53.3
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 2.4e-40 169.9 157 54.8
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 4.2e-40 169.1 149 54.4
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 9.3e-40 167.9 141 57.4
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 9.3e-40 167.9 234 44.9
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.2e-39 167.5 187 48.1
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 2.1e-39 166.8 136 58.8
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.6e-39 165.6 267 40.8
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 6.0e-39 165.2 176 49.4
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.0e-38 164.5 161 53.4
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.3e-38 164.1 146 56.8
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.3e-38 163.3 141 56.0
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 3.9e-38 162.5 133 59.4
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 8.7e-38 161.4 144 55.6
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 9.6e-37 157.9 135 55.6
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.6e-36 157.1 183 48.1
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 8.2e-36 154.8 125 57.6
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 1.1e-35 154.5 201 43.3
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 3.1e-35 152.9 196 44.9
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 2.6e-34 149.8 180 45.6
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 4.9e-33 145.6 115 57.4
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 8.4e-33 144.8 133 54.9
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 1.9e-32 143.7 126 52.4
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 2.1e-31 140.2 86 70.9
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 6.7e-30 135.2 210 41.4
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 9.7e-29 131.3 199 42.7
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.8e-28 129.0 122 53.3
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 8.2e-28 128.3 130 49.2
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 5.9e-26 122.1 93 60.2
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.7e-25 120.6 83 68.7
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 3.6e-23 112.8 122 46.7
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.0e-22 111.3 100 57.0
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 4.1e-19 99.4 228 33.8
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 1.0e-17 94.7 167 38.3
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 4.4e-13 79.3 108 42.6
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 1.4e-08 64.3 68 48.5


User provided reference genes

Program Settings