Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 7.3e-256 886.7 449 100.0
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 6.9e-246 853.6 448 97.5
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 5.3e-113 412.1 462 53.0
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 2.2e-103 380.2 454 48.0
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 6.5e-103 378.6 452 46.2
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.1e-101 373.6 455 49.5
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 3.6e-101 372.9 450 48.9
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.0e-100 371.3 449 48.8
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 2.3e-100 370.2 451 48.8
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 3.9e-100 369.4 452 47.3
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 2.0e-99 367.1 454 49.1
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 4.4e-99 365.9 452 46.7
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 4.4e-99 365.9 450 48.7
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 5.7e-99 365.5 450 48.4
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 9.7e-99 364.8 449 47.7
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 9.7e-99 364.8 450 47.6
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 4.1e-97 359.4 451 48.8
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 7.0e-97 358.6 449 47.2
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 7.0e-97 358.6 451 47.7
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 9.1e-97 358.2 479 47.2
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.2e-96 357.8 451 48.3
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 4.5e-96 355.9 451 46.6
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 4.5e-96 355.9 451 47.7
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 5.9e-96 355.5 453 47.7
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 7.7e-96 355.1 451 46.8
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 1.0e-95 354.8 451 45.2
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 6.5e-95 352.1 455 46.4
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 6.5e-95 352.1 452 46.9
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 6.5e-95 352.1 450 48.2
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 8.5e-95 351.7 450 48.2
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.5e-94 350.1 400 49.0
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.2e-94 349.7 452 44.7
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 3.2e-94 349.7 458 46.1
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 5.5e-94 349.0 457 45.5
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 5.5e-94 349.0 456 45.8
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 5.5e-94 349.0 451 47.2
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 7.2e-94 348.6 452 46.2
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 1.6e-93 347.4 453 47.2
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 2.1e-93 347.1 452 46.7
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 4.7e-93 345.9 455 44.6
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 8.0e-93 345.1 450 48.2
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.0e-92 344.7 400 48.5
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.0e-92 344.7 461 44.7
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 1.8e-92 344.0 452 46.5
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 1.8e-92 344.0 459 44.2
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 2.3e-92 343.6 451 45.5
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 5.2e-92 342.4 454 45.4
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 5.2e-92 342.4 452 43.8
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 8.8e-92 341.7 451 45.5
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 8.8e-92 341.7 455 46.8
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 8.8e-92 341.7 450 45.8
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.1e-91 341.3 451 43.7
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 2.6e-91 340.1 448 45.5
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 9.7e-91 338.2 450 47.3
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 9.7e-91 338.2 451 43.5
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.7e-90 337.4 450 45.1
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 2.2e-90 337.0 450 45.6
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 4.8e-90 335.9 457 45.3
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.4e-89 334.3 452 46.2
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 1.8e-89 334.0 454 46.0
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 2.4e-89 333.6 452 44.0
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 3.1e-89 333.2 455 45.3
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 3.1e-89 333.2 452 46.5
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 5.3e-89 332.4 452 46.2
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 5.3e-89 332.4 452 43.8
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 7.0e-89 332.0 511 41.9
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 9.1e-89 331.6 449 43.9
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 9.1e-89 331.6 451 45.5
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.2e-88 331.3 451 45.2
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.6e-88 330.9 454 46.0
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.6e-88 330.9 452 46.0
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 5.9e-88 328.9 452 45.8
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 5.9e-88 328.9 453 43.7
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 5.9e-88 328.9 453 45.3
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 7.7e-88 328.6 453 45.9
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.0e-87 328.2 449 44.8
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.7e-87 327.4 448 44.9
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.9e-87 326.6 459 44.0
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 8.5e-87 325.1 450 44.0
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.5e-86 324.3 451 45.0
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.9e-86 323.9 427 44.7
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.9e-86 323.9 448 43.5
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 5.5e-86 322.4 458 43.0
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 7.2e-86 322.0 451 42.6
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 1.6e-85 320.9 451 43.0
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 2.1e-85 320.5 451 43.2
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 2.7e-85 320.1 450 42.7
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 2.0e-83 313.9 449 43.0
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 2.6e-83 313.5 484 40.9
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 3.7e-82 309.7 454 43.2
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 6.3e-82 308.9 452 42.9
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 2.0e-80 303.9 451 42.4
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 1.2e-77 294.7 453 42.6
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 3.0e-76 290.0 454 42.1
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 5.7e-75 285.8 375 43.7
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 1.6e-72 277.7 347 48.7
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.0e-71 275.0 450 40.7
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.9e-70 270.8 448 39.7
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 3.1e-60 236.9 409 37.4
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 4.4e-59 233.0 375 38.9
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 4.1e-57 226.5 494 37.2
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 4.7e-53 213.0 452 35.4
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 6.6e-39 166.0 201 47.3
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 8.6e-39 165.6 211 43.1
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 8.6e-39 165.6 286 39.2
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 7.1e-25 119.4 499 26.5
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 7.9e-16 89.4 101 51.5
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 2.3e-15 87.8 518 22.6
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 2.5e-14 84.3 118 39.8
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 4.3e-14 83.6 129 46.5
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.5e-11 73.6 115 36.5
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 4.9e-10 70.1 67 53.7
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 5.5e-09 66.6 351 24.5


User provided reference genes

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