Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 0.0e+00 1194.1 615 100.0
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 0.0e+00 1130.5 593 98.0
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 9.1e-31 139.4 656 28.2
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.6e-22 112.1 783 24.9
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 3.5e-22 110.9 541 27.2
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 5.0e-21 107.1 715 24.3
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 8.5e-21 106.3 749 23.2
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 7.2e-20 103.2 723 24.2
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.4e-18 99.0 808 22.5
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 1.8e-18 98.6 727 23.1
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 6.8e-18 96.7 499 24.6
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 6.3e-16 90.1 757 23.1
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 1.4e-15 89.0 765 23.4
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 9.1e-15 86.3 669 24.4
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 2.0e-14 85.1 692 22.3
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 2.7e-14 84.7 272 29.4
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 4.5e-14 84.0 673 24.7
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 4.5e-14 84.0 684 23.2
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 5.9e-14 83.6 662 24.2
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 7.7e-14 83.2 184 31.0
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.0e-13 82.8 244 29.1
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.7e-13 82.0 272 29.4
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 2.2e-13 81.6 225 29.3
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.9e-13 81.3 681 24.2
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.8e-13 80.9 681 24.2
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 5.0e-13 80.5 671 25.3
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 6.5e-13 80.1 684 23.2
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 8.5e-13 79.7 638 22.7
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 1.5e-12 79.0 154 33.1
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.5e-12 78.2 684 24.4
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.5e-12 78.2 684 24.4
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 3.2e-12 77.8 690 22.9
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 3.2e-12 77.8 154 31.2
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 7.2e-12 76.6 633 23.4
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 9.4e-12 76.3 154 32.5
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 2.7e-11 74.7 773 22.3
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 4.7e-11 73.9 170 28.8
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 4.7e-11 73.9 681 24.7
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 6.1e-11 73.6 128 37.5
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 8.0e-11 73.2 670 22.8
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 1.0e-10 72.8 187 31.0
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 1.4e-10 72.4 234 29.1
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 2.3e-10 71.6 758 23.4
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 2.3e-10 71.6 188 29.8
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 2.3e-10 71.6 350 24.0
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 5.2e-10 70.5 124 36.3
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 5.2e-10 70.5 531 25.4
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 6.8e-10 70.1 555 24.7
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 1.2e-09 69.3 721 23.6
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 1.2e-09 69.3 737 22.8
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.2e-09 69.3 169 33.7
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 1.5e-09 68.9 781 22.4
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 1.5e-09 68.9 165 32.7
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 2.0e-09 68.6 619 23.6
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 2.6e-09 68.2 220 28.2
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 2.6e-09 68.2 761 21.3
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 3.4e-09 67.8 194 30.9
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 3.4e-09 67.8 163 31.3
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 3.4e-09 67.8 715 22.4
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 4.4e-09 67.4 652 24.7
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 5.7e-09 67.0 186 28.0
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.5e-09 66.6 593 22.8
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 7.5e-09 66.6 682 22.3
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 9.8e-09 66.2 76 48.7
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 1.7e-08 65.5 739 22.5
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 2.2e-08 65.1 181 28.2
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 3.7e-08 64.3 158 33.5
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 6.3e-08 63.5 196 23.0
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 6.3e-08 63.5 175 33.1
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 6.3e-08 63.5 666 22.4
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 8.3e-08 63.2 666 23.0
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 1.4e-07 62.4 652 22.2
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 1.8e-07 62.0 182 28.0
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 2.4e-07 61.6 666 23.7
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 3.1e-07 61.2 671 24.6
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 3.1e-07 61.2 318 28.9
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 3.1e-07 61.2 725 22.9
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.1e-07 60.8 186 28.0
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 4.1e-07 60.8 604 22.5
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 5.4e-07 60.5 670 24.8
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 5.4e-07 60.5 682 21.0
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 9.1e-07 59.7 193 28.0
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 1.2e-06 59.3 188 27.1
Nitab4.5_0006455g0020 Nicotiana tabacum HOM05D002515 ORTHO05D002722 1.2e-06 59.3 225 24.4
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.6e-06 58.9 556 23.2
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 1.6e-06 58.9 635 24.1
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.6e-06 58.9 661 23.8
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 1.6e-06 58.9 197 29.4
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 2.0e-06 58.5 180 27.2
Glyma.03G082500 Glycine max HOM05D002515 ORTHO05D002722 2.7e-06 58.2 73 41.1
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 2.7e-06 58.2 174 27.0
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 2.7e-06 58.2 691 21.3
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 2.7e-06 58.2 153 27.5
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 3.5e-06 57.8 681 23.2
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 4.5e-06 57.4 728 22.8
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 5.9e-06 57.0 338 25.1
Lj3g0026583 Lotus japonicus HOM05D002515 ORTHO05D002722 7.7e-06 56.6 194 25.3


User provided reference genes

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