Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 6.2e-70 267.3 132 100.0
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.7e-49 198.7 129 73.6
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.0e-48 196.8 129 72.9
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.0e-48 196.8 129 72.9
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 3.0e-48 195.3 129 72.9
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 3.0e-48 195.3 129 71.3
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 3.9e-48 194.9 129 72.9
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 5.1e-48 194.5 129 72.9
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 8.7e-48 193.7 129 73.6
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 8.7e-48 193.7 129 73.6
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 1.1e-47 193.4 129 73.6
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.5e-47 193.0 129 72.9
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.5e-47 192.2 129 72.1
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 3.3e-47 191.8 129 72.1
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 4.3e-47 191.4 129 69.8
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 4.3e-47 191.4 129 69.8
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 4.3e-47 191.4 129 70.5
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 7.4e-47 190.7 129 69.8
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.4e-47 190.7 129 70.5
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 7.4e-47 190.7 129 70.5
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 7.4e-47 190.7 129 73.6
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 9.6e-47 190.3 129 75.2
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-46 189.9 129 70.5
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.3e-46 189.9 129 69.8
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.6e-46 189.5 129 71.3
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.6e-46 189.5 129 71.3
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.1e-46 189.1 129 72.1
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 2.8e-46 188.7 129 69.0
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 2.8e-46 188.7 129 69.0
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 4.8e-46 188.0 129 69.8
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 4.8e-46 188.0 129 70.5
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 6.2e-46 187.6 129 68.2
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.4e-45 186.4 129 69.0
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.4e-45 186.4 129 69.0
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.4e-45 186.4 129 68.2
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.8e-45 186.0 129 69.8
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.8e-45 186.0 129 69.8
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.4e-45 185.7 129 66.7
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.1e-45 185.3 129 67.4
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.1e-45 185.3 129 68.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 3.1e-45 185.3 129 69.0
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 4.0e-45 184.9 130 68.5
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 4.0e-45 184.9 130 68.5
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 4.0e-45 184.9 130 68.5
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 4.0e-45 184.9 129 69.0
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 5.3e-45 184.5 129 69.0
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 5.3e-45 184.5 129 69.8
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 5.3e-45 184.5 129 69.8
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 5.3e-45 184.5 129 68.2
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 6.9e-45 184.1 129 72.1
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 6.9e-45 184.1 129 69.8
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 6.9e-45 184.1 129 69.0
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 9.0e-45 183.7 129 69.8
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 9.0e-45 183.7 129 69.0
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 9.0e-45 183.7 129 69.8
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.2e-44 183.3 129 67.4
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.2e-44 183.3 129 67.4
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 2.0e-44 182.6 129 68.2
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 2.0e-44 182.6 129 68.2
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.0e-44 182.6 129 68.2
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 2.0e-44 182.6 129 66.7
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 2.0e-44 182.6 129 69.0
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 2.0e-44 182.6 129 65.9
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 2.6e-44 182.2 131 66.4
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.6e-44 182.2 129 68.2
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 2.6e-44 182.2 129 66.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 3.4e-44 181.8 129 67.4
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 4.5e-44 181.4 129 69.8
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.5e-44 181.4 129 67.4
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 5.8e-44 181.0 129 69.8
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 5.8e-44 181.0 129 65.1
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 7.6e-44 180.6 129 68.2
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 7.6e-44 180.6 129 68.2
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 7.6e-44 180.6 129 69.8
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.0e-43 180.3 129 67.4
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.7e-43 179.5 129 69.8
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.7e-43 179.5 129 69.8
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.9e-43 178.7 129 69.8
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.9e-43 178.7 129 69.8
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 3.8e-43 178.3 130 68.5
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.8e-43 178.3 129 66.7
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 3.8e-43 178.3 129 68.2
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 3.8e-43 178.3 129 68.2
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.8e-43 178.3 129 66.7
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 3.8e-43 178.3 129 69.0
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.9e-43 177.9 129 66.7
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 6.5e-43 177.6 129 67.4
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 6.5e-43 177.6 129 67.4
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 8.4e-43 177.2 129 69.0
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.4e-43 177.2 129 65.1
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 8.4e-43 177.2 129 67.4
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.1e-42 176.8 129 69.8
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 1.4e-42 176.4 129 67.4
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.4e-42 176.4 129 69.0
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.4e-42 176.4 129 63.6
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.5e-42 175.6 129 69.0
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 7.1e-42 174.1 129 66.7
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 7.1e-42 174.1 129 66.7
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 1.2e-41 173.3 129 67.4
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.1e-41 172.6 129 65.1
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 3.5e-41 171.8 129 63.6
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 6.7e-40 167.5 129 62.0
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.3e-39 164.9 152 56.6
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 3.7e-38 161.8 129 64.3
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 2.0e-36 156.0 116 65.5
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.2e-35 152.5 112 66.1
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.2e-35 152.5 128 55.5
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.8e-35 151.8 120 63.3
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.1e-34 150.2 130 57.7
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 4.2e-34 148.3 127 54.3
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 2.7e-33 145.6 129 58.9
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.0e-32 143.7 129 57.4
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.8e-32 142.9 129 57.4
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.8e-32 142.9 106 64.2
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 9.7e-31 137.1 129 55.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.1e-29 133.7 129 52.7
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 3.1e-29 132.1 128 50.0
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 2.0e-20 102.8 72 69.4
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.6e-17 93.2 102 48.0
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.3e-14 81.3 81 54.3
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 8.2e-14 80.9 138 36.2
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 3.1e-13 79.0 60 60.0
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 4.7e-09 65.1 50 58.0


User provided reference genes

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