Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 4.2e-56 221.1 109 100.0
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.5e-32 142.9 88 76.1
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 1.5e-32 142.9 86 79.1
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 2.5e-32 142.1 86 75.6
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 7.2e-32 140.6 86 76.7
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 9.4e-32 140.2 86 75.6
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 4.7e-31 137.9 86 74.4
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 8.0e-31 137.1 86 74.4
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 8.0e-31 137.1 86 74.4
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 8.0e-31 137.1 86 75.6
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 1.0e-30 136.7 86 73.3
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-30 136.3 86 73.3
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 1.4e-30 136.3 86 73.3
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 1.8e-30 136.0 86 73.3
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 1.8e-30 136.0 86 74.4
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 2.3e-30 135.6 86 73.3
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.3e-30 135.6 86 75.6
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 2.3e-30 135.6 86 73.3
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 2.3e-30 135.6 86 73.3
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 3.0e-30 135.2 86 73.3
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 3.0e-30 135.2 86 77.9
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 4.0e-30 134.8 86 72.1
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 4.0e-30 134.8 85 74.1
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 5.2e-30 134.4 86 72.1
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 5.2e-30 134.4 86 72.1
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 8.8e-30 133.7 86 72.1
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.2e-29 133.3 86 72.1
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.2e-29 133.3 86 72.1
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 1.2e-29 133.3 86 72.1
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 1.2e-29 133.3 86 72.1
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.2e-29 133.3 86 72.1
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.2e-29 133.3 86 72.1
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 2.0e-29 132.5 86 72.1
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-29 132.5 86 70.9
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 2.0e-29 132.5 86 70.9
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 2.0e-29 132.5 86 70.9
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 2.6e-29 132.1 86 73.3
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 2.6e-29 132.1 86 70.9
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 2.6e-29 132.1 85 72.9
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 2.6e-29 132.1 86 72.1
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.6e-29 132.1 86 68.6
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 3.4e-29 131.7 86 69.8
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 3.4e-29 131.7 86 69.8
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 4.4e-29 131.3 86 69.8
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 4.4e-29 131.3 86 69.8
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 4.4e-29 131.3 86 70.9
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 5.7e-29 131.0 86 70.9
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 5.7e-29 131.0 86 70.9
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 7.5e-29 130.6 85 70.6
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 7.5e-29 130.6 86 70.9
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 9.8e-29 130.2 86 68.6
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 9.8e-29 130.2 86 73.3
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.3e-28 129.8 86 66.3
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.7e-28 129.4 86 72.1
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 1.7e-28 129.4 86 68.6
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 1.7e-28 129.4 86 68.6
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.7e-28 129.4 86 68.6
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 1.7e-28 129.4 86 69.8
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 2.2e-28 129.0 86 69.8
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 2.2e-28 129.0 86 69.8
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 2.8e-28 128.6 86 67.4
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 2.8e-28 128.6 86 72.1
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.8e-28 128.6 86 72.1
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.8e-28 128.6 86 72.1
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 3.7e-28 128.3 86 67.4
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 3.7e-28 128.3 86 67.4
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 3.7e-28 128.3 86 67.4
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 4.8e-28 127.9 86 68.6
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.3e-28 127.1 86 70.9
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.3e-28 127.1 86 70.9
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 8.3e-28 127.1 86 67.4
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.8e-27 125.9 86 66.3
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 1.8e-27 125.9 86 66.3
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 1.8e-27 125.9 86 67.4
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 3.1e-27 125.2 86 66.3
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 4.1e-27 124.8 86 65.1
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 4.1e-27 124.8 86 67.4
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 7.0e-27 124.0 86 67.4
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 3.5e-26 121.7 89 66.3
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 3.8e-25 118.2 86 65.1
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 5.0e-25 117.9 86 65.1
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 8.6e-25 117.1 86 62.8
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 8.6e-25 117.1 86 62.8
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 8.6e-25 117.1 86 64.0
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.1e-24 116.7 86 62.8
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 3.3e-24 115.2 86 61.6
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.3e-24 115.2 86 61.6
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 5.5e-24 114.4 86 65.1
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 9.5e-24 113.6 124 50.0
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.2e-23 113.2 86 62.8
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 1.6e-23 112.8 86 61.6
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 2.1e-23 112.5 86 60.5
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 2.8e-23 112.1 86 60.5
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 3.6e-23 111.7 86 61.6
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 4.7e-23 111.3 86 60.5
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 3.1e-19 98.6 60 73.3
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 7.8e-18 94.0 118 46.6
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 2.3e-17 92.4 86 58.1
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.9e-16 89.4 86 51.2
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.9e-16 89.4 86 51.2
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 7.3e-16 87.4 89 46.1
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 5.2e-14 81.3 69 59.4
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 1.2e-13 80.1 60 61.7
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 4.4e-13 78.2 55 69.1
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.3e-12 76.6 98 41.8
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 4.9e-12 74.7 46 73.9
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 4.6e-10 68.2 42 76.2
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-09 66.6 89 42.7
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 6.6e-09 64.3 103 37.9
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.6e-07 59.7 91 39.6
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 1.1e-06 57.0 110 32.7
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-06 57.0 89 39.3
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-06 56.6 89 39.3
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 2.3e-06 55.8 89 39.3
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 2.3e-06 55.8 89 39.3


User provided reference genes

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