Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022052 Vanilla planifolia HOM05D005367 ORTHO05D006328 2.8e-106 388.7 201 100.0
HPP92_027620 Vanilla planifolia HOM05D005367 ORTHO05D006328 1.4e-105 386.3 201 99.5
Aqoxy7G00339 Aquilegia oxysepala HOM05D005367 ORTHO05D006328 2.5e-22 109.8 153 39.9
Nn1g01501 Nelumbo nucifera HOM05D005367 ORTHO05D006328 2.5e-22 109.8 209 37.8
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 2.4e-20 103.2 171 36.8
Cpa.g.sc18.245 Carica papaya HOM05D005367 ORTHO05D006328 3.1e-20 102.8 191 37.7
Nn6g33454 Nelumbo nucifera HOM05D005367 ORTHO05D006328 6.9e-20 101.7 169 37.9
QL08p049031 Quercus lobata HOM05D005367 ORTHO05D006328 9.0e-20 101.3 157 40.1
Oeu056369.1 Olea europaea HOM05D005367 ORTHO05D006328 2.0e-19 100.1 151 39.7
Gorai.004G158200 Gossypium raimondii HOM05D005367 ORTHO05D006328 2.6e-19 99.8 166 38.0
Duzib133G0249 Durio zibethinus HOM05D005367 ORTHO05D006328 4.4e-19 99.0 156 40.4
Nitab4.5_0001702g0150 Nicotiana tabacum HOM05D005367 ORTHO05D006328 4.4e-19 99.0 154 37.0
TAR375G0799 Trochodendron aralioides HOM05D005367 ORTHO05D006328 4.4e-19 99.0 172 34.9
Gohir.A08G130800 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.3e-18 97.4 156 37.8
Haze_15487 Corylus avellana HOM05D005367 ORTHO05D006328 2.2e-18 96.7 170 35.9
PSO478G0766 Papaver somniferum HOM05D005367 ORTHO05D006328 2.9e-18 96.3 167 38.3
Gohir.D08G152300 Gossypium hirsutum HOM05D005367 ORTHO05D006328 8.4e-18 94.7 200 34.0
Cfa003939 Carpinus fangiana HOM05D005367 ORTHO05D006328 1.1e-17 94.4 174 35.6
Migut.B01742 Erythranthe guttata HOM05D005367 ORTHO05D006328 1.1e-17 94.4 156 37.2
Gohir.D11G092400 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.1e-17 94.4 160 38.1
Gorai.007G098700 Gossypium raimondii HOM05D005367 ORTHO05D006328 1.9e-17 93.6 160 38.1
PSO782G1827 Papaver somniferum HOM05D005367 ORTHO05D006328 1.9e-17 93.6 169 39.6
Peaxi162Scf00191g01425 Petunia axillaris HOM05D005367 ORTHO05D006328 1.9e-17 93.6 155 38.1
Potri.014G082600 Populus trichocarpa HOM05D005367 ORTHO05D006328 2.4e-17 93.2 143 37.8
CANSAT56G3377 Cannabis sativa HOM05D005367 ORTHO05D006328 3.2e-17 92.8 151 35.1
MSTRG.20826 Avicennia marina HOM05D005367 ORTHO05D006328 4.2e-17 92.4 160 35.6
GSVIVG01026893001 Vitis vinifera HOM05D005367 ORTHO05D006328 4.2e-17 92.4 151 37.7
Glyma.18G231900 Glycine max HOM05D005367 ORTHO05D006328 5.4e-17 92.0 158 34.2
Atru.chr1.441 Acer truncatum HOM05D005367 ORTHO05D006328 7.1e-17 91.7 160 36.2
Ciclev10006075m.g Citrus clementina HOM05D005367 ORTHO05D006328 7.1e-17 91.7 165 38.2
Atru.chr1.440 Acer truncatum HOM05D005367 ORTHO05D006328 9.3e-17 91.3 177 35.0
MD07G1139200 Malus domestica HOM05D005367 ORTHO05D006328 9.3e-17 91.3 153 33.3
Nitab4.5_0008050g0010 Nicotiana tabacum HOM05D005367 ORTHO05D006328 9.3e-17 91.3 147 36.7
Eucgr.D02282 Eucalyptus grandis HOM05D005367 ORTHO05D006328 1.2e-16 90.9 155 37.4
CSS0033809 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.6e-16 90.5 163 36.2
SalBow3G2019 Salvia bowleyana HOM05D005367 ORTHO05D006328 1.6e-16 90.5 146 37.0
Gohir.A11G088100 Gossypium hirsutum HOM05D005367 ORTHO05D006328 2.7e-16 89.7 160 37.5
Sopen05g028210 Solanum pennellii HOM05D005367 ORTHO05D006328 2.7e-16 89.7 199 33.2
Atru.chr5.466 Acer truncatum HOM05D005367 ORTHO05D006328 4.6e-16 89.0 151 36.4
Manes.01G258500 Manihot esculenta HOM05D005367 ORTHO05D006328 7.8e-16 88.2 152 34.2
Prupe.2G167900 Prunus persica HOM05D005367 ORTHO05D006328 7.8e-16 88.2 195 32.3
RcHm_v2.0_Chr1g0355051 Rosa chinensis HOM05D005367 ORTHO05D006328 7.8e-16 88.2 156 34.6
Solyc05g049880.3 Solanum lycopersicum HOM05D005367 ORTHO05D006328 1.0e-15 87.8 193 33.2
CSS0040093 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.3e-15 87.4 146 38.4
Lalb_Chr24g0401631 Lupinus albus HOM05D005367 ORTHO05D006328 1.3e-15 87.4 148 36.5
Actinidia20916 Actinidia chinensis HOM05D005367 ORTHO05D006328 3.0e-15 86.3 161 35.4
CiPaw.02G029900 Carya illinoinensis HOM05D005367 ORTHO05D006328 3.9e-15 85.9 171 31.0
Ca_07909_v3 Cicer arietinum L. HOM05D005367 ORTHO05D006328 3.9e-15 85.9 149 31.5
Lalb_Chr01g0011531 Lupinus albus HOM05D005367 ORTHO05D006328 3.9e-15 85.9 148 35.8
THA.LOC104801446 Tarenaya hassleriana HOM05D005367 ORTHO05D006328 5.1e-15 85.5 148 35.1
TWI14G0016 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 6.6e-15 85.1 179 33.0
EL10Ac1g00429 Beta vulgaris HOM05D005367 ORTHO05D006328 8.7e-15 84.7 164 34.1
Duzib205G1257 Durio zibethinus HOM05D005367 ORTHO05D006328 8.7e-15 84.7 181 29.8
FAN10G3657 Fragaria x ananassa HOM05D005367 ORTHO05D006328 8.7e-15 84.7 162 32.1
HanXRQChr16g0522831 Helianthus annuus HOM05D005367 ORTHO05D006328 8.7e-15 84.7 156 36.5
SGA_v2.0_scaffold11G05663 Striga asiatica HOM05D000368 ORTHO05D006328 8.7e-15 84.7 146 35.6
COL.COLO4_12698 Corchorus olitorius HOM05D005367 ORTHO05D006328 1.1e-14 84.3 153 34.6
RcHm_v2.0_Chr1g0377581 Rosa chinensis HOM05D005367 ORTHO05D006328 1.1e-14 84.3 159 32.1
arahy.Tifrunner.gnm1.ann1.D8DQXR Arachis hypogaea HOM05D005367 ORTHO05D006328 1.5e-14 84.0 154 31.2
FAN10G4254 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.5e-14 84.0 169 33.1
MD01G1057500 Malus domestica HOM05D005367 ORTHO05D006328 1.9e-14 83.6 178 27.5
Hma1.2p1_0001F.1_g001380 Hydrangea macrophylla HOM05D005367 ORTHO05D006328 2.5e-14 83.2 154 32.5
MD01G1202200 Malus domestica HOM05D005367 ORTHO05D006328 2.5e-14 83.2 153 35.9
PGR031G3282 Punica granatum HOM05D005367 ORTHO05D006328 2.5e-14 83.2 151 36.4
Thecc.01G360700 Theobroma cacao HOM05D005367 ORTHO05D006328 2.5e-14 83.2 149 35.6
arahy.Tifrunner.gnm1.ann1.G5US7K Arachis hypogaea HOM05D005367 ORTHO05D006328 3.3e-14 82.8 154 30.5
vmacro13291 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 3.3e-14 82.8 156 35.3
Dinv43805 Davidia involucrata HOM05D005367 ORTHO05D006328 4.3e-14 82.4 185 31.9
Potri.002G158500 Populus trichocarpa HOM05D005367 ORTHO05D006328 4.3e-14 82.4 162 32.1
Eucgr.E00158 Eucalyptus grandis HOM05D005367 ORTHO05D006328 5.6e-14 82.0 145 34.5
FvH4_7g29600 Fragaria vesca HOM05D005367 ORTHO05D006328 5.6e-14 82.0 176 34.1
FAN06G0563 Fragaria x ananassa HOM05D005367 ORTHO05D006328 5.6e-14 82.0 153 34.6
Sc01g0003360 Simmondsia chinensis HOM05D005367 ORTHO05D006328 5.6e-14 82.0 158 34.8
PGSC0003DMG400021656 Solanum tuberosum HOM05D005367 ORTHO05D006328 5.6e-14 82.0 193 31.1
Ciclev10021865m.g Citrus clementina HOM05D005367 ORTHO05D006328 7.3e-14 81.6 177 33.9
Lj9A582T87 Lonicera japonica HOM05D005367 ORTHO05D006328 9.6e-14 81.3 152 32.9
vmacro06668 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 9.6e-14 81.3 156 35.9
FvH4_7g14150 Fragaria vesca HOM05D005367 ORTHO05D006328 1.6e-13 80.5 153 34.0
FAN10G0042 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.6e-13 80.5 153 34.0
Lj1g0004821 Lotus japonicus HOM05D005367 ORTHO05D006328 2.8e-13 79.7 148 32.4
Cc02_g37850 Coffea canephora HOM05D005367 ORTHO05D006328 3.6e-13 79.3 148 37.2
FAN01G2456 Fragaria x ananassa HOM05D005367 ORTHO05D006328 6.2e-13 78.6 153 33.3
ECA234G3275 Erigeron canadensis HOM05D005367 ORTHO05D006328 1.1e-12 77.8 157 35.7
Psat3g109400 Pisum sativum HOM05D005367 ORTHO05D006328 1.1e-12 77.8 146 30.8
VMungo1383G2792 Vigna mungo HOM05D005367 ORTHO05D006328 1.1e-12 77.8 151 31.8
FAN03G1221 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.4e-12 77.4 153 33.3
TWI59G0064 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 1.8e-12 77.0 174 32.2
ClCG06G003800 Citrullus lanatus HOM05D005367 ORTHO05D006328 2.4e-12 76.6 171 29.8
Manes.05G036200 Manihot esculenta HOM05D005367 ORTHO05D006328 2.4e-12 76.6 147 34.0
Manes.06G148200 Manihot esculenta HOM05D005367 ORTHO05D006328 2.4e-12 76.6 163 34.4
Ah.05g180710 Amaranthus hybridus HOM05D005367 ORTHO05D006328 3.1e-12 76.3 176 33.5
CsaV3_6G000470 Cucumis sativus L. HOM05D005367 ORTHO05D006328 3.1e-12 76.3 181 30.9
MELO3C021217.2 Cucumis melo HOM05D005367 ORTHO05D006328 4.0e-12 75.9 159 28.9
unitig_61.g26388 Utricularia gibba HOM05D005367 ORTHO05D006328 4.0e-12 75.9 153 30.7
PGR042G0868 Punica granatum HOM05D005367 ORTHO05D006328 5.3e-12 75.5 152 35.5
DCAR_010300 Daucus carota HOM05D005367 ORTHO05D006328 6.9e-12 75.1 160 33.1
VMungo1383G2823 Vigna mungo HOM05D005367 ORTHO05D006328 9.0e-12 74.7 156 31.4
TPR.G37815 Trifolium pratense HOM05D005367 ORTHO05D006328 1.2e-11 74.3 155 28.4
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 1.5e-11 73.9 180 32.2
BolC8t52897H Brassica oleracea HOM05D000368 ORTHO05D000289 1.5e-11 73.9 180 32.2
RcHm_v2.0_Chr1g0354801 Rosa chinensis HOM05D005367 ORTHO05D006328 1.5e-11 73.9 156 32.7
COL.COLO4_14330 Corchorus olitorius HOM05D005367 ORTHO05D006328 2.6e-11 73.2 158 31.6
Thhalv10008538m.g Eutrema salsugineum HOM05D005367 ORTHO05D006328 5.8e-11 72.0 199 32.2
QL09p013904 Quercus lobata HOM05D005367 ORTHO05D006328 5.8e-11 72.0 201 31.8
MBI17_g24635_MAGBIO Magnolia biondii HOM05D005367 ORTHO05D006328 9.9e-11 71.2 197 29.4
Phvul.008G065800 Phaseolus vulgaris HOM05D005367 ORTHO05D006328 9.9e-11 71.2 139 30.2
Sed0017642 Sechium edule HOM05D005367 ORTHO05D006328 9.9e-11 71.2 163 31.9
Sp1g00570 Schrenkiella parvula HOM05D005367 ORTHO05D006328 2.2e-10 70.1 167 33.5
Medtr7g077380 Medicago truncatula HOM05D005367 ORTHO05D006328 2.9e-10 69.7 148 29.1
BraA09t42260Z Brassica rapa HOM05D005367 ORTHO05D006328 4.9e-10 68.9 180 31.7
AUR62004342 Chenopodium quinoa HOM05D005367 ORTHO05D006328 4.9e-10 68.9 140 32.1
Hund16930 Selenicereus undatus HOM05D005367 ORTHO05D006328 8.4e-10 68.2 147 29.9
AL1G10610 Arabidopsis lyrata HOM05D005367 ORTHO05D006328 1.1e-09 67.8 178 34.8
Os04g0556900 Oryza sativa ssp. japonica HOM05D005367 ORTHO05D006328 1.4e-09 67.4 179 30.2
Lsat_1_v5_gn_4_36280 Lactuca sativa HOM05D005367 ORTHO05D006328 2.4e-09 66.6 184 30.4
Rhsim03G0187100 Rhododendron simsii HOM05D005367 ORTHO05D006328 7.1e-09 65.1 220 29.5
Carub.0001s0048 Capsella rubella HOM05D005367 ORTHO05D006328 1.2e-08 64.3 148 32.4
AT1G01730 Arabidopsis thaliana HOM05D005367 ORTHO05D006328 1.0e-07 61.2 196 31.1
FAN03G1577 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.0e-07 61.2 139 30.9
Zm00001eb249910 Zea mays HOM05D057943 ORTHO05D049650 1.1e-06 57.8 84 39.3
Actinidia34119 Actinidia chinensis HOM05D005367 ORTHO05D006328 1.5e-06 57.4 138 31.2
SEGI_25569 Sequoiadendron giganteum HOM05D019105 ORTHO05D006328 5.6e-06 55.5 110 28.2
Dinv35219 Davidia involucrata HOM05D005367 ORTHO05D006328 7.4e-06 55.1 134 32.1
FAN10G2377 Fragaria x ananassa HOM05D005367 ORTHO05D006328 7.4e-06 55.1 56 46.4
FAN28G3009 Fragaria x ananassa HOM05D005367 ORTHO05D006328 7.4e-06 55.1 56 46.4


User provided reference genes

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