Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_022044 Vanilla planifolia HOM05D001549 ORTHO05D005557 2.7e-85 318.5 154 100.0
HPP92_022058 Vanilla planifolia HOM05D001549 ORTHO05D005557 1.5e-43 179.9 163 63.2
MBI03_g13443_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 2.3e-31 139.4 165 49.1
CSS0047743 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 3.0e-31 139.0 164 47.6
Lalb_Chr02g0144131 Lupinus albus HOM05D001549 ORTHO05D005557 3.0e-31 139.0 165 48.5
arahy.Tifrunner.gnm1.ann1.9J2F9Q Arachis hypogaea HOM05D001549 ORTHO05D005557 8.6e-31 137.5 169 46.7
arahy.Tifrunner.gnm1.ann1.UW2LYQ Arachis hypogaea HOM05D001549 ORTHO05D005557 8.6e-31 137.5 169 46.7
MBI03_g13442_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 8.6e-31 137.5 163 47.9
FvH4_4g37301 Fragaria vesca HOM05D001549 ORTHO05D005557 1.5e-30 136.7 167 46.7
FAN17G2050 Fragaria x ananassa HOM05D001549 ORTHO05D005557 1.9e-30 136.3 153 50.3
Nitab4.5_0003448g0010 Nicotiana tabacum HOM05D001549 ORTHO05D005557 3.3e-30 135.6 163 47.9
TAR629G1676 Trochodendron aralioides HOM05D001549 ORTHO05D005557 4.3e-30 135.2 165 47.3
Nitab4.5_0000146g0180 Nicotiana tabacum HOM05D001549 ORTHO05D005557 5.6e-30 134.8 163 47.2
RcHm_v2.0_Chr4g0447131 Rosa chinensis HOM05D001549 ORTHO05D005557 5.6e-30 134.8 167 46.1
Cfa018671 Carpinus fangiana HOM05D001549 ORTHO05D005557 9.6e-30 134.0 163 48.5
CsaV3_5G029120 Cucumis sativus L. HOM05D001549 ORTHO05D005557 1.2e-29 133.7 168 45.2
Prupe.1G351000 Prunus persica HOM05D001549 ORTHO05D005557 1.6e-29 133.3 169 46.2
MSTRG.425 Avicennia marina HOM05D001549 ORTHO05D005557 2.1e-29 132.9 173 46.8
VMungo0720G2183 Vigna mungo HOM05D001549 ORTHO05D005557 2.1e-29 132.9 163 45.4
Haze_17399 Corylus avellana HOM05D001549 ORTHO05D005557 2.8e-29 132.5 163 47.2
Nn4g25180 Nelumbo nucifera HOM05D001549 ORTHO05D005557 2.8e-29 132.5 163 46.6
Sc25g0001420 Simmondsia chinensis HOM05D001549 ORTHO05D005557 2.8e-29 132.5 166 44.6
Solyc02g050240.4 Solanum lycopersicum HOM05D001549 ORTHO05D005557 2.8e-29 132.5 163 46.0
Sopen02g008530 Solanum pennellii HOM05D001549 ORTHO05D005557 2.8e-29 132.5 163 46.0
Cc11_g04170 Coffea canephora HOM05D001549 ORTHO05D005557 3.6e-29 132.1 163 46.6
Lj5g0017773 Lotus japonicus HOM05D001549 ORTHO05D005557 3.6e-29 132.1 165 46.1
MD16G1004600 Malus domestica HOM05D001549 ORTHO05D005557 3.6e-29 132.1 173 45.7
TWI53G1100 Tripterygium wilfordii HOM05D001549 ORTHO05D005557 3.6e-29 132.1 167 45.5
Migut.L00788 Erythranthe guttata HOM05D001549 ORTHO05D005557 4.7e-29 131.7 183 42.1
Prupe.1G351200 Prunus persica HOM05D001549 ORTHO05D005557 4.7e-29 131.7 169 45.6
GSVIVG01034358001 Vitis vinifera HOM05D001549 ORTHO05D005557 4.7e-29 131.7 163 46.0
Atru.chr11.52 Acer truncatum HOM05D001549 ORTHO05D005557 1.1e-28 130.6 164 45.7
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 1.1e-28 130.6 163 46.6
Phvul.007G012500 Phaseolus vulgaris HOM05D001549 ORTHO05D005557 1.1e-28 130.6 165 44.2
MELO3C011764.2 Cucumis melo HOM05D001549 ORTHO05D005557 1.4e-28 130.2 168 43.5
Glyma.20G100400 Glycine max HOM05D001549 ORTHO05D005557 1.4e-28 130.2 165 45.5
Atru.chr11.48 Acer truncatum HOM05D001549 ORTHO05D005557 2.4e-28 129.4 164 47.6
Ca_11276_v3 Cicer arietinum L. HOM05D001549 ORTHO05D005557 2.4e-28 129.4 165 44.2
Migut.L00842 Erythranthe guttata HOM05D001549 ORTHO05D005557 2.4e-28 129.4 163 46.6
GSVIVG01034359001 Vitis vinifera HOM05D001549 ORTHO05D005557 2.4e-28 129.4 163 46.0
Zm00001eb271750 Zea mays HOM05D001549 ORTHO05D005557 2.4e-28 129.4 163 42.9
PGR142G2256 Punica granatum HOM05D001549 ORTHO05D005557 4.0e-28 128.6 167 43.1
Gohir.A04G109500 Gossypium hirsutum HOM05D001549 ORTHO05D005557 5.2e-28 128.3 165 43.6
CiPaw.15G000600 Carya illinoinensis HOM05D001549 ORTHO05D005557 6.8e-28 127.9 163 44.8
Carub.0001s3946 Capsella rubella HOM05D001549 ORTHO05D005557 8.9e-28 127.5 163 44.8
Lalb_Chr21g0307441 Lupinus albus HOM05D001549 ORTHO05D005557 1.2e-27 127.1 163 44.2
Ciclev10014380m.g Citrus clementina HOM05D001549 ORTHO05D005557 1.5e-27 126.7 167 43.1
THA.LOC104815249 Tarenaya hassleriana HOM05D001549 ORTHO05D005557 1.5e-27 126.7 165 43.0
Psat6g235720 Pisum sativum HOM05D001549 ORTHO05D005557 2.0e-27 126.3 165 44.2
Sed0013808 Sechium edule HOM05D001549 ORTHO05D005557 2.0e-27 126.3 167 41.9
DCAR_026873 Daucus carota HOM05D001549 ORTHO05D005557 2.6e-27 125.9 161 43.5
Duzib132G0881 Durio zibethinus HOM05D001549 ORTHO05D005557 2.6e-27 125.9 163 43.6
Actinidia04366 Actinidia chinensis HOM05D001549 ORTHO05D005557 3.4e-27 125.6 163 45.4
Potri.007G001300 Populus trichocarpa HOM05D001549 ORTHO05D005557 3.4e-27 125.6 185 42.7
A06p03180 Brassica napus HOM05D001549 ORTHO05D005557 4.4e-27 125.2 163 44.2
BraA06t23529Z Brassica rapa HOM05D001549 ORTHO05D005557 4.4e-27 125.2 163 44.2
Sabra07G0001000 Salix brachista HOM05D001549 ORTHO05D005557 4.4e-27 125.2 168 43.5
Hund05502 Selenicereus undatus HOM05D001549 ORTHO05D005557 4.4e-27 125.2 163 43.6
vmacro16217 Vaccinium macrocarpon HOM05D001549 ORTHO05D005557 4.4e-27 125.2 198 41.4
Gorai.012G136300 Gossypium raimondii HOM05D001549 ORTHO05D005557 5.8e-27 124.8 165 42.4
EL10Ac9g23012 Beta vulgaris HOM05D001549 ORTHO05D005557 7.6e-27 124.4 163 44.2
Lsat_1_v5_gn_6_17661 Lactuca sativa HOM05D001549 ORTHO05D005557 7.6e-27 124.4 163 45.4
PSO170G0691 Papaver somniferum HOM05D001549 ORTHO05D005557 7.6e-27 124.4 166 42.8
C06p05570 Brassica napus HOM05D001549 ORTHO05D005557 9.9e-27 124.0 162 43.8
BolC6t35663H Brassica oleracea HOM05D001549 ORTHO05D005557 9.9e-27 124.0 162 43.8
CDE04G0096 Ceratophyllum demersum HOM05D001549 ORTHO05D005557 9.9e-27 124.0 162 43.8
Eucgr.G02608 Eucalyptus grandis HOM05D001549 ORTHO05D005557 9.9e-27 124.0 167 43.7
PSO017G4045 Papaver somniferum HOM05D001549 ORTHO05D005557 9.9e-27 124.0 166 42.8
BcaB04g17256 Brassica carinata HOM05D001549 ORTHO05D005557 1.7e-26 123.2 163 43.6
Gohir.D04G149700 Gossypium hirsutum HOM05D001549 ORTHO05D005557 1.7e-26 123.2 165 41.8
BcaC01g01225 Brassica carinata HOM05D001549 ORTHO05D005557 2.2e-26 122.9 162 43.2
BolC3t21274H Brassica oleracea HOM05D001549 ORTHO05D005557 2.2e-26 122.9 162 43.2
TPR.G4142 Trifolium pratense HOM05D001549 ORTHO05D005557 2.2e-26 122.9 165 43.0
Eucgr.G02611 Eucalyptus grandis HOM05D001549 ORTHO05D005557 2.9e-26 122.5 167 43.7
Thhalv10011253m.g Eutrema salsugineum HOM05D001549 ORTHO05D005557 2.9e-26 122.5 163 44.2
CAN.G739.7 Capsicum annuum HOM05D001549 ORTHO05D005557 3.8e-26 122.1 163 44.2
AT1G50380 Arabidopsis thaliana HOM05D001549 ORTHO05D005557 6.4e-26 121.3 163 44.2
ECA233G5707 Erigeron canadensis HOM05D001549 ORTHO05D005557 8.4e-26 120.9 163 43.6
Aa31LG10G3900 Aethionema arabicum HOM05D001549 ORTHO05D005557 1.1e-25 120.6 167 41.9
Os06g0730600 Oryza sativa ssp. japonica HOM05D001549 ORTHO05D005557 1.1e-25 120.6 163 41.1
QL01p000526 Quercus lobata HOM05D001549 ORTHO05D005557 1.4e-25 120.2 163 42.9
Rhsim12G0073200 Rhododendron simsii HOM05D001549 ORTHO05D005557 1.9e-25 119.8 163 43.6
AL1G58024 Arabidopsis lyrata HOM05D001549 ORTHO05D005557 2.4e-25 119.4 163 42.9
C03p89610 Brassica napus HOM05D001549 ORTHO05D005557 2.4e-25 119.4 162 42.0
ClCG11G012740 Citrullus lanatus HOM05D001549 ORTHO05D005557 3.2e-25 119.0 195 37.4
AUR62032901 Chenopodium quinoa HOM05D001549 ORTHO05D005557 4.2e-25 118.6 164 42.1
COL.COLO4_33142 Corchorus olitorius HOM05D001549 ORTHO05D005557 4.2e-25 118.6 118 50.8
QL01p000406 Quercus lobata HOM05D001549 ORTHO05D005557 4.2e-25 118.6 163 42.3
Manes.11G000600 Manihot esculenta HOM05D001549 ORTHO05D005557 5.4e-25 118.2 180 41.7
A08p03180 Brassica napus HOM05D001549 ORTHO05D005557 1.2e-24 117.1 162 42.0
BraA08t32351Z Brassica rapa HOM05D001549 ORTHO05D005557 1.2e-24 117.1 162 42.0
CANSAT78G2104 Cannabis sativa HOM05D001549 ORTHO05D005557 1.2e-24 117.1 169 42.0
ECA233G6260 Erigeron canadensis HOM05D001549 ORTHO05D005557 1.2e-24 117.1 163 42.3
Manes.04G161300 Manihot esculenta HOM05D001549 ORTHO05D005557 1.2e-24 117.1 163 41.1
Sp1g37210 Schrenkiella parvula HOM05D001549 ORTHO05D005557 1.6e-24 116.7 163 41.1
ATR0124G045 Amborella trichopoda HOM05D001549 ORTHO05D005557 2.7e-24 115.9 166 41.0
ATR0124G037 Amborella trichopoda HOM05D001549 ORTHO05D005557 3.5e-24 115.5 166 39.8
Lj3C845T4 Lonicera japonica HOM05D001549 ORTHO05D005557 4.6e-24 115.2 168 40.5
Cpa.g.sc221.18 Carica papaya HOM05D001549 ORTHO05D005557 6.0e-24 114.8 165 39.4
Ah.01g011570 Amaranthus hybridus HOM05D001549 ORTHO05D005557 7.8e-24 114.4 162 42.0
CARHR040400 Cardamine hirsuta HOM05D001549 ORTHO05D005557 1.7e-23 113.2 163 40.5
Aqoxy5G00260 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 2.3e-23 112.8 163 42.3
SalBow1G1414 Salvia bowleyana HOM05D001549 ORTHO05D005557 3.9e-23 112.1 154 42.9
SalBow2G1760 Salvia bowleyana HOM05D001549 ORTHO05D005557 5.1e-23 111.7 154 42.2
Peaxi162Scf00900g00016 Petunia axillaris HOM05D001549 ORTHO05D005557 3.3e-22 109.0 137 46.7
HanXRQChr17g0558111 Helianthus annuus HOM05D001549 ORTHO05D005557 9.6e-22 107.5 162 43.2
Aqoxy3G00003 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 2.4e-20 102.8 169 39.6
SHI21178 Sapria himalayana HOM05D001549 ORTHO05D005557 1.2e-16 90.5 212 30.7
CSS0019717 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 1.6e-16 90.1 65 64.6
Mapoly0011s0194 Marchantia polymorpha HOM05D001549 ORTHO05D005557 1.0e-15 87.4 179 35.8
AagrBONN_evm.TU.Sc2ySwM_117.1347 Anthoceros agrestis HOM05D001549 ORTHO05D005557 3.9e-15 85.5 167 34.7
Medtr1g115230 Medicago truncatula HOM05D001549 ORTHO05D005557 5.1e-15 85.1 67 62.7
SMO146G0169 Selaginella moellendorffii HOM05D001549 ORTHO05D005557 6.6e-15 84.7 151 38.4
Pp3c6_15290 Physcomitrium patens HOM05D001549 ORTHO05D005557 1.5e-14 83.6 163 33.1
Oeu027933.1 Olea europaea HOM05D001549 ORTHO05D005557 5.6e-14 81.6 65 61.5
Sed0005799 Sechium edule HOM05D001549 ORTHO05D005557 5.6e-14 81.6 77 55.8
SEGI_15512 Sequoiadendron giganteum HOM05D001549 ORTHO05D005557 7.3e-14 81.3 101 44.6
Dinv02497 Davidia involucrata HOM05D001549 ORTHO05D005557 4.8e-13 78.6 60 65.0
QL01p000509 Quercus lobata HOM05D001549 ORTHO05D005557 5.3e-12 75.1 86 51.2
AUR62017751 Chenopodium quinoa HOM05D001549 ORTHO05D005557 3.4e-11 72.4 65 58.5
Dinv02496 Davidia involucrata HOM05D001549 ORTHO05D005557 8.4e-10 67.8 41 73.2
SGA_v2.0_scaffold46G17331 Striga asiatica HOM05D001549 ORTHO05D005557 1.4e-09 67.0 110 37.3
DCAR_026867 Daucus carota HOM05D001549 ORTHO05D005557 1.9e-09 66.6 42 66.7
Eucgr.G02610 Eucalyptus grandis HOM05D001549 ORTHO05D005557 1.9e-09 66.6 74 51.4
CAN.G1507.3 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-09 65.9 42 66.7
Ciclev10018222m.g Citrus clementina HOM05D001549 ORTHO05D005557 3.2e-09 65.9 150 30.7
Cre17.g697650 Chlamydomonas reinhardtii HOM05D001549 ORTHO05D005557 3.9e-07 58.9 162 29.6
Hma1.2p1_0018F.1_g013300 Hydrangea macrophylla HOM05D001549 ORTHO05D005557 1.9e-06 56.6 29 86.2
CBR_g41177 Chara braunii HOM05D000019 ORTHO05D000002 9.6e-06 54.3 36 61.1


User provided reference genes

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