Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 6.7e-102 374.0 187 100.0
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 9.4e-72 273.9 137 98.5
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 4.5e-50 201.8 169 65.1
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 3.8e-49 198.7 119 80.7
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 5.0e-49 198.4 180 57.8
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 5.0e-49 198.4 143 67.8
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 5.0e-49 198.4 124 78.2
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 6.5e-49 198.0 119 79.8
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 8.5e-49 197.6 190 58.4
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 8.5e-49 197.6 193 59.6
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 1.1e-48 197.2 144 69.4
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.5e-48 196.1 170 62.9
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 5.5e-48 194.9 119 79.0
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 7.2e-48 194.5 170 62.4
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 7.2e-48 194.5 170 62.4
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.2e-47 193.7 169 60.4
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.2e-47 193.7 165 65.5
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.6e-47 193.4 133 72.2
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 2.7e-47 192.6 148 66.2
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 3.6e-47 192.2 130 72.3
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 4.7e-47 191.8 168 60.7
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 4.7e-47 191.8 131 72.5
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 4.7e-47 191.8 140 65.7
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 4.7e-47 191.8 167 58.7
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 6.1e-47 191.4 163 62.0
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 6.1e-47 191.4 132 71.2
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.0e-46 190.7 168 59.5
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.0e-46 190.7 133 69.9
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 1.0e-46 190.7 163 60.1
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.4e-46 190.3 139 66.2
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 1.4e-46 190.3 161 62.1
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.4e-46 190.3 127 72.4
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.8e-46 189.9 151 64.9
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 1.8e-46 189.9 168 61.3
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 2.3e-46 189.5 169 58.6
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 2.3e-46 189.5 132 71.2
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 3.0e-46 189.1 169 60.9
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 3.0e-46 189.1 168 58.9
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 3.0e-46 189.1 156 61.5
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 4.0e-46 188.7 143 67.8
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 4.0e-46 188.7 176 56.8
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 5.2e-46 188.3 131 69.5
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 5.2e-46 188.3 176 58.0
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 6.8e-46 188.0 141 67.4
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 6.8e-46 188.0 185 57.8
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 8.8e-46 187.6 118 75.4
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 8.8e-46 187.6 167 58.7
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 8.8e-46 187.6 155 62.6
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.2e-45 187.2 159 59.1
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 1.2e-45 187.2 131 70.2
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.2e-45 187.2 146 65.1
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.5e-45 186.8 131 68.7
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.5e-45 186.8 185 57.8
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.5e-45 186.8 126 71.4
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 1.5e-45 186.8 163 62.6
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.5e-45 186.8 180 58.3
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 2.0e-45 186.4 185 53.5
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 3.4e-45 185.7 119 73.9
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 3.4e-45 185.7 184 56.0
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 3.4e-45 185.7 172 59.3
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 3.4e-45 185.7 182 54.9
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 3.4e-45 185.7 170 58.8
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 3.4e-45 185.7 133 68.4
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 4.4e-45 185.3 132 71.2
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 4.4e-45 185.3 149 61.7
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 5.7e-45 184.9 180 54.4
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 5.7e-45 184.9 136 68.4
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 5.7e-45 184.9 133 66.9
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 7.5e-45 184.5 117 72.6
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.3e-44 183.7 164 60.4
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.3e-44 183.7 149 63.8
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 1.3e-44 183.7 126 70.6
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.7e-44 183.3 144 63.9
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.2e-44 183.0 118 75.4
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.8e-44 182.6 137 65.7
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 2.8e-44 182.6 187 55.6
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 2.8e-44 182.6 126 67.5
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 2.8e-44 182.6 143 64.3
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 6.3e-44 181.4 130 66.9
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 6.3e-44 181.4 132 68.2
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 8.3e-44 181.0 188 53.7
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 8.3e-44 181.0 146 65.1
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.4e-43 180.3 143 62.2
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.4e-43 180.3 149 59.7
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.8e-43 179.9 130 67.7
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 2.4e-43 179.5 130 66.9
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 4.1e-43 178.7 148 60.8
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 5.4e-43 178.3 137 64.2
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.2e-42 177.2 178 54.5
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 1.6e-42 176.8 149 58.4
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 1.6e-42 176.8 149 58.4
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 2.0e-42 176.4 181 53.0
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 5.9e-42 174.9 118 67.8
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 7.7e-42 174.5 120 69.2
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 1.1e-40 170.6 156 59.6
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 2.8e-39 166.0 124 63.7
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 3.6e-39 165.6 143 59.4
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 6.1e-39 164.9 120 60.8
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.4e-38 163.7 172 51.7
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 3.4e-37 159.1 124 61.3
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 2.2e-36 156.4 136 55.9
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 1.1e-35 154.1 152 52.0
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 5.4e-35 151.8 199 46.2
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 3.0e-33 146.0 122 59.8
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 4.3e-32 142.1 128 56.2
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 2.1e-31 139.8 173 45.7
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 5.2e-30 135.2 134 52.2
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 9.8e-21 104.4 132 42.4
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.1e-19 100.9 61 75.4
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 1.0e-17 94.4 116 42.2
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 1.9e-16 90.1 84 54.8
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 2.1e-15 86.7 102 52.0
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 4.7e-15 85.5 102 51.0
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 3.4e-13 79.3 57 61.4
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.6e-10 70.5 46 69.6
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.3e-09 67.4 60 55.0


User provided reference genes

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