Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021885 Vanilla planifolia HOM05D000912 ORTHO05D001232 3.8e-61 238.0 123 100.0
HPP92_020426 Vanilla planifolia HOM05D000912 ORTHO05D001232 6.9e-39 164.1 118 68.6
TAR626G1203 Trochodendron aralioides HOM05D000912 ORTHO05D001232 5.7e-09 64.7 108 39.8
Sc23g0006050 Simmondsia chinensis HOM05D000912 ORTHO05D001232 9.7e-09 63.9 121 37.2
THA.LOC104813621 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 2.2e-08 62.8 106 40.6
arahy.Tifrunner.gnm1.ann1.PZ05LS Arachis hypogaea HOM05D000912 ORTHO05D001232 2.8e-08 62.4 126 37.3
THA.LOC104812346 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 2.8e-08 62.4 122 37.7
Psat7g264600 Pisum sativum HOM05D000912 ORTHO05D001232 6.3e-08 61.2 126 40.5
Lj3g0006194 Lotus japonicus HOM05D000912 ORTHO05D001232 8.2e-08 60.8 125 36.8
TPR.G38732 Trifolium pratense HOM05D000912 ORTHO05D001232 8.2e-08 60.8 121 34.7
Glyma.15G000300 Glycine max HOM05D000912 ORTHO05D001232 1.1e-07 60.5 124 36.3
Glyma.08G226700 Glycine max HOM05D000912 ORTHO05D001232 1.8e-07 59.7 124 34.7
Medtr4g005050 Medicago truncatula HOM05D000912 ORTHO05D001232 1.8e-07 59.7 125 40.8
Oeu054518.1 Olea europaea HOM05D000912 ORTHO05D001232 2.4e-07 59.3 108 35.2
TAR636G0354 Trochodendron aralioides HOM05D000912 ORTHO05D001232 2.4e-07 59.3 125 37.6
Aa31LG7G1170 Aethionema arabicum HOM05D000912 ORTHO05D001232 3.1e-07 58.9 107 39.3
Phvul.005G082300 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 4.1e-07 58.5 123 34.1
Phvul.010G165900 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 4.1e-07 58.5 123 36.6
Ca_03788_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 5.3e-07 58.2 125 35.2
Prupe.3G028200 Prunus persica HOM05D000912 ORTHO05D001232 9.1e-07 57.4 108 38.9
Glyma.07G000400 Glycine max HOM05D000912 ORTHO05D001232 1.2e-06 57.0 106 37.7
FAN05G3420 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.5e-06 56.6 108 38.0
Medtr7g105680 Medicago truncatula HOM05D023663 ORTHO05D011835 1.5e-06 56.6 125 32.8
TWI75G1589 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 2.0e-06 56.2 111 31.5
Aa31LG4G1980 Aethionema arabicum HOM05D000912 ORTHO05D001232 2.6e-06 55.8 124 33.9
FAN09G3798 Fragaria x ananassa HOM05D000912 ORTHO05D001232 2.6e-06 55.8 109 34.9
Potri.007G003301 Populus trichocarpa HOM05D000912 ORTHO05D011835 2.6e-06 55.8 124 35.5
Potri.014G000500 Populus trichocarpa HOM05D000912 ORTHO05D001232 2.6e-06 55.8 110 36.4
BcaC03g15858 Brassica carinata HOM05D000912 ORTHO05D001232 3.4e-06 55.5 120 33.3
A02p22450 Brassica napus HOM05D000912 ORTHO05D001232 3.4e-06 55.5 120 33.3
C02p36130 Brassica napus HOM05D000912 ORTHO05D001232 3.4e-06 55.5 120 33.3
BolC2t09626H Brassica oleracea HOM05D000912 ORTHO05D001232 3.4e-06 55.5 120 33.3
BraA02t07249Z Brassica rapa HOM05D000912 ORTHO05D001232 3.4e-06 55.5 120 33.3
MD09G1170000 Malus domestica HOM05D000912 ORTHO05D001232 3.4e-06 55.5 108 36.1
Potri.019G036800 Populus trichocarpa HOM05D000912 ORTHO05D011835 3.4e-06 55.5 124 35.5
Sp1g14860 Schrenkiella parvula HOM05D000912 ORTHO05D001232 3.4e-06 55.5 102 38.2
Aqoxy7G02531 Aquilegia oxysepala HOM05D000912 ORTHO05D001232 4.5e-06 55.1 108 32.4
AL1G28880 Arabidopsis lyrata HOM05D000912 ORTHO05D001232 4.5e-06 55.1 108 35.2
Oeu035306.2 Olea europaea HOM05D000912 ORTHO05D001232 4.5e-06 55.1 107 36.4
Migut.M00129 Erythranthe guttata HOM05D000912 ORTHO05D001232 5.9e-06 54.7 107 35.5
Oeu061990.1 Olea europaea HOM05D000912 ORTHO05D001232 5.9e-06 54.7 107 35.5
RcHm_v2.0_Chr2g0148331 Rosa chinensis HOM05D000912 ORTHO05D001232 5.9e-06 54.7 125 33.6
Sabra07G0002500 Salix brachista HOM05D000912 ORTHO05D001232 5.9e-06 54.7 125 33.6
AT1G16710 Arabidopsis thaliana HOM05D000912 ORTHO05D001232 7.7e-06 54.3 102 35.3
BcaB03g13036 Brassica carinata HOM05D000912 ORTHO05D001232 7.7e-06 54.3 118 36.4
BcaC08g47464 Brassica carinata HOM05D000912 ORTHO05D001232 7.7e-06 54.3 106 36.8
CSS0008849 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 7.7e-06 54.3 109 34.9
Peaxi162Scf00329g00813 Petunia axillaris HOM05D000912 ORTHO05D001232 7.7e-06 54.3 106 35.8


User provided reference genes

Program Settings