Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 2.5e-141 505.8 320 100.0
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 1.2e-31 141.4 288 41.3
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 6.2e-31 139.0 300 48.0
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 8.9e-30 135.2 266 48.5
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 2.6e-29 133.7 272 55.5
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 4.9e-28 129.4 267 41.2
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 4.1e-27 126.3 279 49.8
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 5.4e-27 125.9 279 41.6
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 5.4e-27 125.9 272 49.6
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 7.1e-27 125.6 283 50.5
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 2.7e-26 123.6 297 46.5
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 6.0e-26 122.5 271 51.3
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 6.0e-26 122.5 272 47.4
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.0e-25 121.7 281 53.7
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 1.0e-25 121.7 274 54.7
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 2.3e-25 120.6 270 38.9
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 8.6e-25 118.6 283 49.1
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 8.6e-25 118.6 300 54.3
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 1.1e-24 118.2 272 51.1
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 1.1e-24 118.2 270 51.5
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.9e-24 117.5 323 44.6
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.9e-24 117.5 276 49.6
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 3.3e-24 116.7 280 46.1
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 4.3e-24 116.3 272 51.5
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 5.6e-24 115.9 272 52.9
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 5.6e-24 115.9 281 52.0
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 5.6e-24 115.9 276 55.4
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 7.3e-24 115.5 274 46.7
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 7.3e-24 115.5 276 52.9
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 7.3e-24 115.5 283 52.7
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 7.3e-24 115.5 272 39.3
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 9.5e-24 115.2 291 51.9
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.6e-23 114.4 284 53.2
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 2.8e-23 113.6 278 45.7
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 2.8e-23 113.6 273 49.1
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 2.8e-23 113.6 265 55.1
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 2.8e-23 113.6 270 44.4
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 3.6e-23 113.2 271 52.0
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 3.6e-23 113.2 293 49.1
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 6.2e-23 112.5 271 50.2
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 8.1e-23 112.1 305 49.8
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 1.1e-22 111.7 281 48.0
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 1.1e-22 111.7 274 38.0
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.4e-22 111.3 293 51.5
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.4e-22 111.3 293 51.5
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 2.4e-22 110.5 273 54.6
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 2.4e-22 110.5 270 44.4
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 3.1e-22 110.2 276 55.8
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 3.1e-22 110.2 278 51.4
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 4.0e-22 109.8 291 52.6
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 5.2e-22 109.4 291 52.9
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 6.8e-22 109.0 273 45.1
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 8.9e-22 108.6 281 45.6
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 8.9e-22 108.6 294 51.4
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.2e-21 108.2 277 50.9
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 1.5e-21 107.8 267 40.4
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 2.6e-21 107.1 273 41.0
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 2.6e-21 107.1 288 50.7
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 3.4e-21 106.7 266 47.7
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 3.4e-21 106.7 276 50.4
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 4.4e-21 106.3 287 47.7
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.4e-21 106.3 291 52.2
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 5.8e-21 105.9 288 51.7
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 7.6e-21 105.5 288 35.8
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 9.9e-21 105.1 283 45.9
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.3e-20 104.8 279 47.7
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.3e-20 104.8 273 41.4
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.3e-20 104.8 288 35.8
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.1e-19 101.7 272 46.7
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 1.9e-19 100.9 292 51.7
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 3.2e-19 100.1 280 45.4
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 4.1e-19 99.8 290 33.8
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 4.1e-19 99.8 276 46.0
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 5.4e-19 99.4 284 52.8
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 5.4e-19 99.4 306 46.7
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 9.2e-19 98.6 288 50.7
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 9.2e-19 98.6 267 47.2
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.1e-18 97.4 264 46.2
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 3.5e-18 96.7 287 37.6
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 3.5e-18 96.7 269 34.6
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 3.5e-18 96.7 269 34.6
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 6.0e-18 95.9 277 44.8
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 1.0e-17 95.1 285 50.9
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.3e-17 94.7 85 70.6
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 1.3e-17 94.7 284 53.5
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 1.7e-17 94.4 275 41.8
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 2.3e-17 94.0 276 45.3
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 2.3e-17 94.0 73 58.9
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 5.1e-17 92.8 291 34.7
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 8.7e-17 92.0 279 49.5
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 8.7e-17 92.0 279 49.5
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 1.9e-16 90.9 281 39.1
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.2e-15 88.2 392 30.1
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 1.8e-14 84.3 273 49.5
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 2.6e-13 80.5 89 60.7
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 5.8e-13 79.3 265 50.2
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 2.2e-12 77.4 274 32.5
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 3.8e-12 76.6 75 66.7
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 4.9e-12 76.3 77 66.2
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.2e-10 71.6 109 43.1
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 1.6e-10 71.2 234 41.0
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 7.8e-10 68.9 95 46.3
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 1.3e-09 68.2 84 56.0
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 1.7e-09 67.8 129 34.9
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 6.6e-09 65.9 266 30.8
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 1.5e-08 64.7 388 38.4
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.3e-07 61.6 64 57.8
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 8.1e-07 58.9 71 52.1


User provided reference genes

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