Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 4.6e-258 894.0 445 100.0
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 6.3e-159 564.7 387 71.6
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.1e-158 563.9 374 72.5
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.7e-156 556.6 390 69.7
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 5.0e-156 555.1 367 73.6
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 8.6e-156 554.3 380 71.3
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.5e-155 552.7 375 71.7
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 4.2e-155 552.0 375 71.2
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 5.5e-155 551.6 384 69.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 9.5e-155 550.8 409 67.2
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 8.0e-154 547.7 380 70.5
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.8e-153 546.6 380 68.9
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 3.0e-153 545.8 378 70.9
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.0e-153 545.8 378 70.9
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 5.2e-153 545.0 394 67.5
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 8.9e-153 544.3 389 70.2
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 8.9e-153 544.3 376 71.3
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 8.9e-153 544.3 376 71.0
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 8.9e-153 544.3 395 68.1
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.2e-152 543.9 400 68.2
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.2e-152 543.9 382 69.1
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 2.0e-152 543.1 368 70.9
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 2.6e-152 542.7 370 70.0
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.4e-152 542.3 358 73.7
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 3.4e-152 542.3 391 67.8
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 3.4e-152 542.3 395 68.4
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 7.5e-152 541.2 369 71.0
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 9.8e-152 540.8 354 72.3
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.3e-151 540.4 385 69.4
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.7e-151 540.0 385 68.8
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.2e-151 539.7 385 69.6
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 2.2e-151 539.7 367 71.9
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 2.2e-151 539.7 394 66.5
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 2.8e-151 539.3 384 68.5
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 2.8e-151 539.3 395 67.8
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.8e-151 539.3 392 68.4
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 3.7e-151 538.9 356 73.0
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 6.3e-151 538.1 381 69.6
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 6.3e-151 538.1 390 66.9
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.1e-150 537.3 367 70.3
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.1e-150 537.3 385 68.8
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.1e-150 537.3 389 69.7
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.4e-150 536.2 357 72.0
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 9.2e-150 534.3 363 71.1
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 2.0e-149 533.1 371 69.3
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.0e-149 533.1 368 71.2
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.7e-149 532.7 394 67.8
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.0e-148 530.8 371 69.0
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.5e-147 526.9 382 69.4
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.9e-147 526.6 370 69.7
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.9e-147 526.6 352 72.4
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.9e-147 526.6 368 69.3
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 1.6e-146 523.5 352 71.6
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 1.6e-146 523.5 406 65.0
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 3.6e-146 522.3 375 67.5
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 4.7e-146 521.9 390 66.9
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.4e-145 520.4 351 72.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.8e-145 520.0 407 66.8
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 4.0e-145 518.8 351 72.4
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 4.0e-145 518.8 356 70.5
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 8.9e-145 517.7 428 62.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 7.5e-144 514.6 381 67.2
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.7e-143 513.5 363 69.1
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 2.9e-143 512.7 402 63.9
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 2.4e-142 509.6 391 64.2
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 3.6e-138 495.7 358 67.3
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 6.2e-138 495.0 404 63.6
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 5.2e-137 491.9 337 72.4
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 4.9e-135 485.3 375 63.7
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.9e-132 475.7 358 65.6
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.9e-132 475.7 358 65.6
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 6.0e-125 451.8 401 60.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.1e-123 447.6 351 64.7
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.1e-121 439.5 391 59.6
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 8.9e-121 438.0 374 60.2
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.5e-115 420.6 301 70.8
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.3e-106 391.0 358 56.7
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.1e-105 386.3 249 73.9
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 5.8e-104 382.1 260 70.0
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 7.6e-104 381.7 248 73.4
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.3e-95 354.4 283 65.0
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 1.0e-92 344.7 296 59.8
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 5.1e-84 315.8 231 64.5
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 7.4e-83 312.0 233 66.5
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 3.1e-81 306.6 354 47.5
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.7e-77 293.5 174 77.0
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 4.5e-64 249.6 206 61.7
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.0e-56 224.2 145 73.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 2.7e-40 170.6 137 62.0
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 6.6e-39 166.0 126 64.3
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 5.4e-09 66.6 77 48.1


User provided reference genes

Program Settings