Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021842 Vanilla planifolia HOM05D003732 ORTHO05D014000 1.4e-95 353.2 215 100.0
Dinv24812 Davidia involucrata HOM05D003732 ORTHO05D014000 8.6e-61 237.7 211 59.7
Aqoxy3G01103 Aquilegia oxysepala HOM05D003732 ORTHO05D014000 6.8e-58 228.0 212 57.5
Nn3g16769 Nelumbo nucifera HOM05D003732 ORTHO05D014000 2.0e-57 226.5 211 57.3
CDE07G2061 Ceratophyllum demersum HOM05D003732 ORTHO05D014000 3.4e-57 225.7 212 53.8
GSVIVG01007696001 Vitis vinifera HOM05D003732 ORTHO05D014000 1.7e-53 213.4 211 51.7
Haze_07546 Corylus avellana HOM05D003732 ORTHO05D014000 2.1e-51 206.5 191 53.9
Cfa019169 Carpinus fangiana HOM05D003732 ORTHO05D014000 1.5e-49 200.3 191 52.9
ATR1152G071 Amborella trichopoda HOM05D003732 ORTHO05D014000 2.2e-48 196.4 210 51.9
TAR374G1668 Trochodendron aralioides HOM05D003732 ORTHO05D014000 7.3e-36 154.8 164 51.8
Pp3c17_6460 Physcomitrium patens HOM05D003732 ORTHO05D014000 8.4e-32 141.4 191 42.9
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 8.6e-29 131.3 190 41.1
Pp3c1_29590 Physcomitrium patens HOM05D003732 ORTHO05D004965 4.6e-22 109.0 118 46.6
SEGI_38076 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 5.8e-17 92.0 85 54.1
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 6.0e-14 82.0 124 39.5
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 6.0e-14 82.0 124 39.5
Nn4g22676 Nelumbo nucifera HOM05D003732 ORTHO05D014000 1.0e-13 81.3 102 44.1
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 1.8e-13 80.5 123 40.7
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 3.9e-13 79.3 123 39.0
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 5.1e-13 79.0 117 38.5
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 8.7e-13 78.2 123 38.2
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 8.7e-13 78.2 123 39.8
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 1.1e-12 77.8 123 39.0
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 1.5e-12 77.4 123 39.0
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 2.5e-12 76.6 123 39.0
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 3.3e-12 76.3 124 40.3
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 3.3e-12 76.3 123 37.4
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 4.3e-12 75.9 123 38.2
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 4.3e-12 75.9 123 38.2
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 4.3e-12 75.9 123 36.6
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 4.3e-12 75.9 123 38.2
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 5.6e-12 75.5 123 37.4
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 5.6e-12 75.5 123 39.0
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 5.6e-12 75.5 123 37.4
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 5.6e-12 75.5 116 37.9
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 5.6e-12 75.5 116 37.9
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 7.4e-12 75.1 124 40.3
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 7.4e-12 75.1 124 40.3
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 7.4e-12 75.1 124 40.3
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 7.4e-12 75.1 123 37.4
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 7.4e-12 75.1 123 39.0
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 9.6e-12 74.7 123 36.6
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 9.6e-12 74.7 123 37.4
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 9.6e-12 74.7 123 38.2
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 1.3e-11 74.3 123 36.6
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 1.3e-11 74.3 123 36.6
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 1.6e-11 73.9 123 37.4
MBI19_g13322_MAGBIO Magnolia biondii HOM05D003732 ORTHO05D004965 1.6e-11 73.9 134 35.1
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 1.6e-11 73.9 123 38.2
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 1.6e-11 73.9 123 38.2
SEGI_14455 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 1.6e-11 73.9 105 41.0
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 1.6e-11 73.9 117 38.5
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 2.1e-11 73.6 123 38.2
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 2.1e-11 73.6 123 37.4
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 2.1e-11 73.6 123 36.6
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 2.1e-11 73.6 139 35.3
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 2.1e-11 73.6 123 35.0
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 2.1e-11 73.6 124 36.3
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 2.1e-11 73.6 139 35.3
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 2.8e-11 73.2 123 37.4
Zm00001eb171040 Zea mays HOM05D003732 ORTHO05D004965 2.8e-11 73.2 116 37.9
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 3.6e-11 72.8 123 36.6
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 3.6e-11 72.8 123 36.6
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 3.6e-11 72.8 125 38.4
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 4.8e-11 72.4 118 39.0
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 4.8e-11 72.4 123 35.8
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 4.8e-11 72.4 139 35.3
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 6.2e-11 72.0 124 36.3
Ca_01368_v3 Cicer arietinum L. HOM05D003732 ORTHO05D004965 8.1e-11 71.6 139 34.5
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 8.1e-11 71.6 123 36.6
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 8.1e-11 71.6 123 35.0
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 8.1e-11 71.6 124 35.5
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 8.1e-11 71.6 124 33.1
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 1.1e-10 71.2 123 35.8
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 1.1e-10 71.2 123 35.0
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.1e-10 71.2 124 37.9
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 1.1e-10 71.2 116 37.1
PSO339G6685 Papaver somniferum HOM05D003732 ORTHO05D004965 1.4e-10 70.9 134 34.3
PSO384G0746 Papaver somniferum HOM05D003732 ORTHO05D004965 1.4e-10 70.9 134 34.3
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 1.4e-10 70.9 123 35.0
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 1.4e-10 70.9 123 35.0
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 1.4e-10 70.9 123 35.0
CiPaw.13G104000 Carya illinoinensis HOM05D003732 ORTHO05D004965 1.8e-10 70.5 123 35.8
CBR_g29478 Chara braunii HOM05D003732 ORTHO05D004965 1.8e-10 70.5 118 35.6
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.8e-10 70.5 117 36.8
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 1.8e-10 70.5 123 35.0
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 1.8e-10 70.5 123 35.8
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 2.4e-10 70.1 123 35.0
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 2.4e-10 70.1 123 35.0
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 2.4e-10 70.1 139 34.5
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 3.1e-10 69.7 139 34.5
SGA_v2.0_scaffold316G48397 Striga asiatica HOM05D003732 ORTHO05D004965 3.1e-10 69.7 123 33.3
Cre01.g035350 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 4.0e-10 69.3 115 37.4
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 4.0e-10 69.3 139 33.8
Ah.15g096680 Amaranthus hybridus HOM05D003732 ORTHO05D004965 5.3e-10 68.9 123 35.0
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 5.3e-10 68.9 108 38.0
Lj3g0021313 Lotus japonicus HOM05D003732 ORTHO05D004965 5.3e-10 68.9 108 38.9
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 5.3e-10 68.9 117 34.2
PSO170G1826 Papaver somniferum HOM05D003732 ORTHO05D004965 6.9e-10 68.6 116 36.2
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 6.9e-10 68.6 123 35.0
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 9.0e-10 68.2 123 35.8
Pp3c9_8960 Physcomitrium patens HOM05D003732 ORTHO05D004965 9.0e-10 68.2 124 34.7
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.2e-09 67.8 123 35.0
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 1.5e-09 67.4 123 33.3
ATR0594G235 Amborella trichopoda HOM05D003732 ORTHO05D004965 2.0e-09 67.0 124 33.9
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 2.0e-09 67.0 100 40.0
CDE09G1079 Ceratophyllum demersum HOM05D003732 ORTHO05D004965 2.6e-09 66.6 123 34.1
unitig_736.g22424 Utricularia gibba HOM05D003732 ORTHO05D004965 3.4e-09 66.2 115 35.7
SMO367G0374 Selaginella moellendorffii HOM05D003732 ORTHO05D004965 5.8e-09 65.5 118 33.1
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 7.6e-09 65.1 117 34.2
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 1.3e-08 64.3 123 35.0
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 1.7e-08 63.9 123 34.1
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 2.9e-08 63.2 141 29.8
FAN25G0838 Fragaria x ananassa HOM05D003732 ORTHO05D004965 1.4e-07 60.8 122 33.6
Sc06g0008130 Simmondsia chinensis HOM05D003732 ORTHO05D004965 1.4e-07 60.8 123 31.7
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 1.9e-07 60.5 136 31.6
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 2.4e-07 60.1 142 31.7
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 7.1e-07 58.5 104 34.6
Peaxi162Scf00616g00313 Petunia axillaris HOM05D003732 ORTHO05D004965 1.2e-06 57.8 117 35.0
FAN16G2257 Fragaria x ananassa HOM05D003732 ORTHO05D004965 1.6e-06 57.4 142 31.0
Rhsim01G0223000 Rhododendron simsii HOM05D003732 ORTHO05D004965 2.7e-06 56.6 81 38.3
CANSAT54G2866 Cannabis sativa HOM05D003732 ORTHO05D004965 4.6e-06 55.8 155 27.1
PGSC0003DMG401029354 Solanum tuberosum HOM05D003732 ORTHO05D004965 4.6e-06 55.8 83 38.6
FAN21G0728 Fragaria x ananassa HOM05D003732 ORTHO05D004965 6.0e-06 55.5 142 30.3


User provided reference genes

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