Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 0.0e+00 1822.4 895 100.0
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.8e-144 517.7 1032 38.4
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 1.2e-137 495.0 942 38.5
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 4.0e-136 490.0 944 40.7
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 7.5e-135 485.7 783 43.7
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 2.2e-134 484.2 669 47.4
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 2.9e-134 483.8 568 51.6
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 5.4e-133 479.6 968 38.0
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 9.2e-133 478.8 413 61.3
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 9.2e-133 478.8 505 54.1
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 1.7e-131 474.6 949 39.0
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 3.9e-131 473.4 511 52.8
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 5.0e-131 473.0 410 59.8
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 5.0e-131 473.0 402 61.2
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 1.5e-130 471.5 579 47.3
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 2.5e-130 470.7 489 53.8
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 2.5e-130 470.7 501 52.9
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 3.3e-130 470.3 809 41.7
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 3.3e-130 470.3 442 56.8
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 4.3e-130 469.9 954 37.8
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 2.8e-129 467.2 482 56.4
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 1.1e-128 465.3 491 54.8
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 1.8e-128 464.5 492 53.9
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 3.1e-128 463.8 489 53.8
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 1.2e-127 461.8 907 39.1
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 2.0e-127 461.1 545 52.1
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 2.6e-127 460.7 921 38.1
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 4.4e-127 459.9 522 51.9
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 5.8e-127 459.5 466 56.4
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 7.5e-127 459.1 513 52.6
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 9.8e-127 458.8 703 42.2
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 1.7e-126 458.0 637 47.7
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 2.9e-126 457.2 1004 36.8
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 1.1e-125 455.3 483 55.9
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 2.4e-125 454.1 551 51.2
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 5.4e-125 453.0 558 49.1
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 7.1e-125 452.6 404 59.9
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 1.2e-124 451.8 412 58.7
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 1.6e-124 451.4 474 55.1
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 4.6e-124 449.9 409 59.2
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 3.0e-123 447.2 976 37.3
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 6.6e-123 446.0 961 37.9
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 8.6e-123 445.7 622 46.6
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 1.1e-122 445.3 943 37.4
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 2.5e-122 444.1 497 52.7
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 3.3e-122 443.7 732 43.2
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 9.5e-122 442.2 969 37.4
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 1.2e-121 441.8 942 38.1
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 2.8e-121 440.7 890 38.9
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 2.8e-121 440.7 985 36.5
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 4.7e-121 439.9 592 49.0
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 6.2e-121 439.5 938 38.1
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 1.4e-120 438.3 403 58.3
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 6.8e-120 436.0 418 58.9
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 8.9e-120 435.6 409 58.4
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 5.8e-119 433.0 899 37.6
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 9.9e-119 432.2 958 35.9
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 2.9e-118 430.6 396 58.6
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 3.7e-118 430.3 607 46.5
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 1.1e-117 428.7 709 42.7
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 7.1e-117 426.0 749 41.1
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.2e-116 425.2 619 44.7
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.6e-116 424.9 685 44.5
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 3.5e-116 423.7 544 48.0
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 1.0e-115 422.2 461 53.6
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.7e-115 421.4 955 35.9
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 1.1e-114 418.7 379 61.5
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.5e-114 418.3 545 47.7
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 2.8e-113 414.1 392 55.9
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 4.7e-113 413.3 731 41.5
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 2.4e-112 411.0 958 36.4
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.2e-111 408.7 591 44.7
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 1.5e-111 408.3 978 35.2
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 2.0e-111 407.9 497 50.3
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 2.0e-111 407.9 395 55.7
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 2.0e-111 407.9 674 41.7
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 4.4e-111 406.8 396 54.8
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 5.8e-111 406.4 384 56.2
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 5.8e-111 406.4 403 56.6
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 4.9e-110 403.3 386 57.5
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 8.4e-110 402.5 789 38.0
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 1.9e-109 401.4 388 55.7
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 1.9e-109 401.4 723 40.5
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 7.1e-109 399.4 950 36.3
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 1.2e-108 398.7 399 56.4
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 2.1e-108 397.9 402 56.2
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 4.6e-108 396.7 384 56.0
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 7.8e-108 396.0 569 44.8
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 3.9e-107 393.7 385 54.5
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 6.6e-107 392.9 402 54.2
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 1.1e-106 392.1 402 54.7
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 1.5e-106 391.7 1064 33.1
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 1.1e-104 385.6 423 53.2
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 1.4e-104 385.2 607 44.5
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 2.4e-101 374.4 935 34.3
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 3.2e-101 374.0 429 51.0
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 4.0e-96 357.1 417 50.6
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.0e-96 357.1 553 44.3
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 1.8e-88 331.6 241 67.6
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 6.9e-88 329.7 809 34.0
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.8e-86 323.9 460 45.7
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 6.3e-81 306.6 591 36.7
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 4.8e-73 280.4 516 38.6
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 6.3e-65 253.4 671 35.0
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 2.0e-55 221.9 271 51.7
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 1.7e-38 165.6 209 43.1
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 1.6e-36 159.1 273 42.9
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 3.7e-33 147.9 185 47.0
HPP92_021786 Vanilla planifolia HOM05D006304 ORTHO05D428957 1.2e-26 126.3 282 37.6
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 2.0e-26 125.6 107 61.7
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 9.2e-24 116.7 82 64.6
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 1.0e-14 86.7 112 45.5
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.3e-13 81.6 82 57.3
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 1.2e-12 79.7 78 55.1


User provided reference genes

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