Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 4.1e-142 508.1 259 100.0
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 2.8e-90 335.9 260 63.8
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 1.5e-88 330.1 249 64.7
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.9e-83 313.2 250 62.8
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 3.1e-81 305.8 253 61.3
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 3.1e-81 305.8 255 62.0
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 1.4e-78 297.0 260 57.3
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 4.2e-78 295.4 255 58.8
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 1.6e-77 293.5 247 58.3
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 3.5e-77 292.4 256 59.0
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 5.6e-75 285.0 253 58.5
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 5.6e-75 285.0 248 58.1
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 4.8e-74 282.0 251 56.2
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 6.2e-74 281.6 249 57.0
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 6.2e-74 281.6 248 58.5
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 5.3e-73 278.5 240 57.9
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 1.2e-72 277.3 253 54.9
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 1.2e-72 277.3 259 52.5
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 5.8e-72 275.0 243 56.8
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 1.3e-71 273.9 247 55.9
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.7e-71 273.5 254 55.1
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 2.2e-71 273.1 250 56.4
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 2.9e-71 272.7 245 53.1
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 3.8e-71 272.3 260 54.6
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 3.8e-71 272.3 243 55.1
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.1e-70 270.8 246 57.7
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 1.4e-70 270.4 247 55.5
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 2.5e-70 269.6 255 53.3
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 3.2e-70 269.2 246 57.3
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 1.6e-69 266.9 260 53.1
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 2.1e-69 266.5 244 53.7
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 2.7e-69 266.2 247 54.3
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 4.6e-69 265.4 261 52.9
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 2.3e-68 263.1 254 54.3
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 3.9e-68 262.3 256 51.6
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 5.1e-68 261.9 237 57.8
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 1.1e-67 260.8 243 53.9
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 1.1e-67 260.8 248 54.0
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 1.1e-67 260.8 230 58.3
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.5e-67 260.4 250 52.4
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 2.5e-67 259.6 245 54.3
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 4.3e-67 258.8 255 54.1
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 5.6e-67 258.5 250 52.4
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 5.6e-67 258.5 230 57.8
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 9.6e-67 257.7 258 53.9
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 1.3e-66 257.3 230 58.3
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 1.6e-66 256.9 254 51.6
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 1.1e-65 254.2 260 53.1
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.1e-65 254.2 256 51.6
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 1.4e-65 253.8 237 54.9
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.4e-65 253.8 257 50.6
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 2.4e-65 253.1 257 52.5
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.4e-65 253.1 250 51.6
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 1.2e-64 250.8 235 54.5
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 1.5e-64 250.4 214 60.3
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.5e-64 250.4 247 53.4
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 2.0e-64 250.0 254 52.0
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 2.6e-64 249.6 257 51.8
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.6e-64 249.6 254 51.2
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 3.4e-64 249.2 248 54.4
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 5.8e-64 248.4 256 51.2
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 7.6e-64 248.1 256 52.0
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 2.2e-63 246.5 249 52.6
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 2.5e-62 243.0 254 50.8
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 3.2e-62 242.7 245 50.6
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 4.2e-62 242.3 245 50.2
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 4.2e-62 242.3 257 48.6
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 2.1e-61 240.0 245 49.8
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 2.7e-61 239.6 245 51.0
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 2.7e-61 239.6 242 50.8
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 2.7e-61 239.6 256 46.9
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 2.7e-61 239.6 242 50.8
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 2.7e-61 239.6 245 48.2
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 4.6e-61 238.8 256 47.3
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 4.6e-61 238.8 247 50.2
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 1.0e-60 237.7 260 46.2
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 1.0e-60 237.7 260 46.2
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 1.0e-60 237.7 260 46.5
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.3e-60 236.5 242 49.6
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 3.9e-60 235.7 289 46.7
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 8.7e-60 234.6 260 49.2
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 1.1e-59 234.2 235 51.9
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 5.7e-59 231.9 260 48.8
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 9.7e-59 231.1 242 51.2
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-58 230.3 260 49.2
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 2.2e-58 229.9 229 54.1
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 3.1e-57 226.1 239 52.7
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 3.4e-56 222.6 248 49.2
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 1.3e-55 220.7 267 43.4
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 2.9e-55 219.5 210 55.2
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 5.5e-54 215.3 227 49.8
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 4.6e-53 212.2 329 41.3
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 7.9e-53 211.5 248 46.8
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 7.4e-51 204.9 206 51.5
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 2.8e-50 203.0 187 53.5
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 4.8e-50 202.2 248 44.4
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 4.2e-46 189.1 244 42.6
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 8.8e-44 181.4 168 53.0
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 1.3e-42 177.6 224 48.2
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 4.2e-38 162.5 146 52.7
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 4.2e-38 162.5 170 48.2
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 3.9e-36 156.0 133 57.9
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 2.6e-32 143.3 136 52.2
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 1.9e-30 137.1 107 60.7
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 1.4e-28 131.0 242 35.5
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 7.2e-22 108.6 104 53.8
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.7e-21 106.7 116 46.6
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.7e-21 106.7 116 46.6
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 3.0e-20 103.2 126 46.0
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 1.7e-18 97.4 200 32.0
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 6.3e-18 95.5 101 47.5
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.7e-15 87.4 91 49.5
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 1.7e-15 87.4 198 29.8
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 2.3e-15 87.0 154 31.8
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 8.3e-10 68.6 67 50.7


User provided reference genes

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