Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 3.2e-147 525.0 254 100.0
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 7.8e-45 184.9 265 38.9
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 2.1e-42 176.8 258 42.6
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 4.0e-41 172.6 258 40.3
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 6.4e-39 165.2 253 39.1
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 2.7e-37 159.8 258 37.6
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 4.6e-37 159.1 266 39.5
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 4.6e-37 159.1 259 39.4
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 6.0e-37 158.7 259 39.4
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 8.6e-36 154.8 259 38.2
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 1.1e-35 154.5 261 41.0
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 4.3e-35 152.5 266 38.7
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 6.2e-34 148.7 273 33.0
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 1.4e-33 147.5 228 41.7
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 2.0e-32 143.7 263 36.5
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 2.0e-32 143.7 261 37.5
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 4.4e-32 142.5 270 34.1
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 4.4e-32 142.5 272 35.3
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 4.4e-32 142.5 271 37.6
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 5.8e-32 142.1 206 39.8
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 7.6e-32 141.7 252 38.5
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 7.6e-32 141.7 255 36.1
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 7.6e-32 141.7 245 40.0
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 7.6e-32 141.7 270 36.7
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 2.2e-31 140.2 258 36.4
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 2.2e-31 140.2 272 36.4
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.2e-31 140.2 254 36.6
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 2.9e-31 139.8 305 33.4
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 8.4e-31 138.3 273 36.3
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 1.1e-30 137.9 271 33.2
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 1.4e-30 137.5 252 38.9
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 1.4e-30 137.5 272 36.4
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 3.2e-30 136.3 257 32.3
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 4.1e-30 136.0 267 37.5
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 9.2e-30 134.8 216 39.4
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 1.2e-29 134.4 259 32.8
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 2.1e-29 133.7 247 35.2
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 2.7e-29 133.3 158 46.2
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 3.5e-29 132.9 285 35.1
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 4.6e-29 132.5 263 35.4
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 7.8e-29 131.7 261 37.2
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 7.8e-29 131.7 263 34.6
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 1.7e-28 130.6 165 43.6
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 1.7e-28 130.6 259 36.7
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 1.7e-28 130.6 264 36.7
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 2.3e-28 130.2 275 35.6
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 3.0e-28 129.8 267 36.3
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 3.0e-28 129.8 267 36.3
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 3.0e-28 129.8 247 38.1
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 3.0e-28 129.8 274 35.0
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 1.9e-27 127.1 117 53.0
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 2.5e-27 126.7 257 36.2
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 4.3e-27 125.9 260 31.2
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 7.3e-27 125.2 255 34.1
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 1.2e-26 124.4 273 34.1
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 1.6e-26 124.0 250 33.6
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 1.6e-26 124.0 273 32.2
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 2.8e-26 123.2 107 57.0
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 3.6e-26 122.9 138 47.8
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 4.7e-26 122.5 269 33.8
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 1.4e-25 120.9 280 32.9
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 1.4e-25 120.9 107 56.1
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 1.4e-25 120.9 107 54.2
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 1.8e-25 120.6 259 32.0
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.8e-25 120.6 107 53.3
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 2.4e-25 120.2 108 55.6
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 3.1e-25 119.8 260 30.8
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 5.2e-25 119.0 257 31.9
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 1.5e-24 117.5 107 52.3
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 2.0e-24 117.1 270 34.4
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 2.6e-24 116.7 113 54.9
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 3.4e-24 116.3 269 31.6
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 4.4e-24 115.9 107 52.3
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 7.6e-24 115.2 172 34.9
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 9.9e-24 114.8 279 31.9
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 9.9e-24 114.8 263 31.2
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 9.9e-24 114.8 304 30.6
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 1.7e-23 114.0 143 42.0
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.2e-23 113.6 127 47.2
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 2.9e-23 113.2 108 53.7
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 2.9e-23 113.2 275 32.7
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 4.9e-23 112.5 278 33.1
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 6.4e-23 112.1 263 32.3
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 1.9e-22 110.5 222 33.3
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 3.2e-22 109.8 132 47.7
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 3.2e-22 109.8 249 32.9
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 3.5e-21 106.3 246 31.3
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 6.6e-20 102.1 218 33.5
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.5e-19 100.9 117 47.0
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 4.3e-19 99.4 198 34.8
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 9.6e-19 98.2 105 51.4
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 1.4e-17 94.4 95 51.6
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 2.4e-17 93.6 250 29.2
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 1.2e-16 91.3 95 50.5
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 2.0e-16 90.5 95 49.5
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 2.6e-16 90.1 89 53.9
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 8.7e-12 75.1 268 27.2
Pp3c2_23860 Physcomitrium patens HOM05D007438 ORTHO05D009395 5.8e-08 62.4 73 45.2
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 3.8e-07 59.7 84 44.0
Ah.16g103180 Amaranthus hybridus HOM05D000136 ORTHO05D000076 3.2e-06 56.6 101 30.7
SEGI_09684 Sequoiadendron giganteum HOM05D000136 ORTHO05D000080 5.5e-06 55.8 103 32.0
SEGI_01302 Sequoiadendron giganteum HOM05D000136 ORTHO05D000080 7.1e-06 55.5 104 31.7


User provided reference genes

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