Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021716 Vanilla planifolia HOM05D001087 ORTHO05D005406 9.4e-223 776.5 396 100.0
HPP92_021688 Vanilla planifolia HOM05D001087 ORTHO05D005406 1.0e-192 676.8 416 86.1
PSO478G2418 Papaver somniferum HOM05D001087 ORTHO05D005406 3.0e-128 462.6 416 60.1
PSO017G2606 Papaver somniferum HOM05D001087 ORTHO05D005406 6.7e-128 461.5 416 59.9
TAR629G2385 Trochodendron aralioides HOM05D001087 ORTHO05D005406 1.5e-127 460.3 420 59.3
Nn4g22026 Nelumbo nucifera HOM05D001087 ORTHO05D005406 4.4e-127 458.8 416 59.4
HPP92_021631 Vanilla planifolia HOM05D001087 ORTHO05D005406 2.2e-126 456.4 233 99.1
Aqoxy3G01996 Aquilegia oxysepala HOM05D001087 ORTHO05D005406 9.1e-125 451.1 416 57.7
MBI07_g11062_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D005406 1.5e-124 450.3 416 58.2
Actinidia19533 Actinidia chinensis HOM05D001087 ORTHO05D005406 2.3e-120 436.4 416 55.8
GSVIVG01032937001 Vitis vinifera HOM05D001087 ORTHO05D005406 2.3e-120 436.4 416 56.5
QL02p063912 Quercus lobata HOM05D001087 ORTHO05D005406 6.7e-120 434.9 416 55.5
CiPaw.03G079200 Carya illinoinensis HOM05D001087 ORTHO05D005406 2.6e-119 433.0 411 56.2
CSS0025073 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D005406 4.4e-119 432.2 416 55.5
ATR0582G201 Amborella trichopoda HOM05D001087 ORTHO05D005406 8.2e-118 427.9 416 56.7
Atru.chr6.2747 Acer truncatum HOM05D001087 ORTHO05D005406 2.0e-116 423.3 416 53.6
Ciclev10014134m.g Citrus clementina HOM05D001087 ORTHO05D005406 4.5e-116 422.2 416 54.3
AUR62017451 Chenopodium quinoa HOM05D001087 ORTHO05D005406 7.7e-116 421.4 416 54.3
Manes.04G095500 Manihot esculenta HOM05D001087 ORTHO05D005406 8.5e-115 417.9 415 54.0
Zm00001eb197740 Zea mays HOM05D001087 ORTHO05D005406 1.5e-114 417.2 416 53.1
CANSAT64G1951 Cannabis sativa HOM05D001087 ORTHO05D005406 2.5e-114 416.4 419 52.7
ClCG05G012390 Citrullus lanatus HOM05D001087 ORTHO05D005406 3.2e-114 416.0 416 52.9
TPR.G31052 Trifolium pratense HOM05D001087 ORTHO05D005406 4.2e-114 415.6 416 53.6
COL.COLO4_13413 Corchorus olitorius HOM05D001087 ORTHO05D005406 5.5e-114 415.2 416 53.8
RcHm_v2.0_Chr2g0176781 Rosa chinensis HOM05D001087 ORTHO05D005406 7.2e-114 414.8 416 53.1
Ca_08243_v3 Cicer arietinum L. HOM05D001087 ORTHO05D005406 1.2e-113 414.1 415 54.0
MD09G1000300 Malus domestica HOM05D001087 ORTHO05D005406 8.0e-113 411.4 417 52.5
Gohir.D08G048400 Gossypium hirsutum HOM05D001087 ORTHO05D005406 1.0e-112 411.0 416 52.9
CsaV3_3G020140 Cucumis sativus L. HOM05D001087 ORTHO05D005406 2.3e-112 409.8 416 52.2
VMungo1383G1594 Vigna mungo HOM05D001087 ORTHO05D005406 4.0e-112 409.1 416 53.1
MELO3C014745.2 Cucumis melo HOM05D001087 ORTHO05D005406 6.7e-112 408.3 416 52.6
Gohir.A08G038200 Gossypium hirsutum HOM05D001087 ORTHO05D005406 1.2e-111 407.5 416 52.4
Gorai.004G047900 Gossypium raimondii HOM05D001087 ORTHO05D005406 1.5e-111 407.1 416 52.6
Cpa.g.sc70.28 Carica papaya HOM05D001087 ORTHO05D005406 2.0e-111 406.8 416 51.4
FvH4_6g54490 Fragaria vesca HOM05D001087 ORTHO05D005406 2.6e-111 406.4 416 52.9
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea HOM05D001087 ORTHO05D005406 4.4e-111 405.6 410 53.4
Glyma.16G044400 Glycine max HOM05D001087 ORTHO05D005406 7.5e-111 404.8 416 52.2
Phvul.001G097600 Phaseolus vulgaris HOM05D001087 ORTHO05D005406 7.5e-111 404.8 416 53.1
Medtr7g084880 Medicago truncatula HOM05D001087 ORTHO05D005406 1.3e-110 404.1 397 53.7
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea HOM05D001087 ORTHO05D005406 1.7e-110 403.7 416 52.4
Lj1g0002000 Lotus japonicus HOM05D001087 ORTHO05D005406 2.2e-110 403.3 416 51.9
Sed0004915 Sechium edule HOM05D001087 ORTHO05D005406 2.8e-110 402.9 416 51.7
Oeu062515.1 Olea europaea HOM05D001087 ORTHO05D005406 6.3e-110 401.7 416 53.1
Lalb_Chr14g0364241 Lupinus albus HOM05D001087 ORTHO05D005406 1.1e-109 401.0 416 52.6
Thecc.04G053100 Theobroma cacao HOM05D001087 ORTHO05D005406 1.8e-109 400.2 416 51.9
TWI32G0903 Tripterygium wilfordii HOM05D001087 ORTHO05D005406 1.8e-109 400.2 421 51.8
Glyma.19G107500 Glycine max HOM05D001087 ORTHO05D005406 2.4e-109 399.8 416 51.7
AUR62032520 Chenopodium quinoa HOM05D001087 ORTHO05D005406 7.0e-109 398.3 379 55.9
Potri.014G141100 Populus trichocarpa HOM05D001087 ORTHO05D005406 5.0e-107 392.1 416 51.7
Lsat_1_v5_gn_3_103380 Lactuca sativa HOM05D001087 ORTHO05D005406 2.1e-105 386.7 412 50.0
ECA246G3450 Erigeron canadensis HOM05D001087 ORTHO05D005406 2.7e-105 386.3 416 50.2
Sopen02g039270 Solanum pennellii HOM05D001087 ORTHO05D005406 1.8e-104 383.6 425 48.7
Eucgr.G01904 Eucalyptus grandis HOM05D001087 ORTHO05D005406 6.8e-104 381.7 405 51.6
Cc07_g01490 Coffea canephora HOM05D001087 ORTHO05D005406 2.0e-103 380.2 417 51.3
vmacro22106 Vaccinium macrocarpon HOM05D001087 ORTHO05D005406 3.7e-102 375.9 475 45.9
CAN.G473.166 Capsicum annuum HOM05D001087 ORTHO05D005406 4.8e-102 375.6 425 48.2
Thhalv10006676m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 9.1e-101 371.3 419 48.4
AT1G12930 Arabidopsis thaliana HOM05D001087 ORTHO05D005406 1.2e-100 370.9 418 48.3
AL1G24570 Arabidopsis lyrata HOM05D001087 ORTHO05D005406 2.7e-100 369.8 420 48.1
BcaB08g34240 Brassica carinata HOM05D001087 ORTHO05D005406 3.5e-100 369.4 419 48.7
Carub.0001s1270 Capsella rubella HOM05D001087 ORTHO05D005406 3.5e-100 369.4 419 48.2
Rhsim08G0036900 Rhododendron simsii HOM05D001087 ORTHO05D005406 5.9e-100 368.6 381 54.3
A09p63520 Brassica napus HOM05D001087 ORTHO05D005406 7.7e-100 368.2 419 48.2
BraA09t41703Z Brassica rapa HOM05D001087 ORTHO05D005406 7.7e-100 368.2 419 48.2
Sp1g11500 Schrenkiella parvula HOM05D001087 ORTHO05D005406 7.7e-100 368.2 418 48.3
C08p47020 Brassica napus HOM05D001087 ORTHO05D005406 1.7e-99 367.1 420 48.1
HanXRQChr17g0550851 Helianthus annuus HOM05D001087 ORTHO05D005406 6.6e-99 365.2 416 48.3
Nitab4.5_0002901g0060 Nicotiana tabacum HOM05D001087 ORTHO05D005406 3.3e-98 362.8 444 46.2
Migut.F00007 Erythranthe guttata HOM05D001087 ORTHO05D005406 5.5e-98 362.1 436 45.2
Ah.02g128690 Amaranthus hybridus HOM05D001087 ORTHO05D005406 1.2e-97 360.9 449 45.9
Prupe.3G316100 Prunus persica HOM05D001087 ORTHO05D005406 3.6e-97 359.4 366 52.5
Duzib138G0185 Durio zibethinus HOM05D001087 ORTHO05D005406 8.0e-97 358.2 368 51.9
THA.LOC104805290 Tarenaya hassleriana HOM05D001087 ORTHO05D005406 1.8e-96 357.1 417 47.5
Hund04150 Selenicereus undatus HOM05D001087 ORTHO05D005406 8.9e-96 354.8 369 52.8
Aa31LG1G1850 Aethionema arabicum HOM05D001087 ORTHO05D005406 4.4e-95 352.4 437 45.1
BolC8t52241H Brassica oleracea HOM05D001087 ORTHO05D005406 1.3e-94 350.9 390 48.7
MSTRG.3036 Avicennia marina HOM05D001087 ORTHO05D005406 1.3e-91 340.9 415 45.5
CDE05G0125 Ceratophyllum demersum HOM05D001087 ORTHO05D005406 7.3e-90 335.1 398 47.0
PGR042G1457 Punica granatum HOM05D001087 ORTHO05D005406 4.7e-89 332.4 418 46.4
SGA_v2.0_scaffold44G16961 Striga asiatica HOM05D001087 ORTHO05D005406 6.8e-88 328.6 438 43.4
EL10Ac6g13922 Beta vulgaris HOM05D001087 ORTHO05D005406 4.1e-85 319.3 478 42.5
Sc16g0004210 Simmondsia chinensis HOM05D001087 ORTHO05D005406 1.6e-84 317.4 273 58.6
FAN14G5757 Fragaria x ananassa HOM05D001087 ORTHO05D005406 3.3e-82 309.7 297 53.9
Psat0s4626g0040 Pisum sativum HOM05D001087 ORTHO05D005406 1.8e-80 303.9 295 55.3
Solyc02g094610.1 Solanum lycopersicum HOM05D001087 ORTHO05D005406 4.0e-80 302.8 274 56.2
SalBow4G1044 Salvia bowleyana HOM05D001087 ORTHO05D005406 1.3e-78 297.7 481 38.3
BcaC05g25140 Brassica carinata HOM05D001087 ORTHO05D005406 1.6e-76 290.8 409 43.5
Lj7A620G39 Lonicera japonica HOM05D001087 ORTHO05D005406 4.6e-76 289.3 339 48.7
Mapoly0055s0098 Marchantia polymorpha HOM05D001087 ORTHO05D005406 1.7e-75 287.3 410 40.2
FAN27G2264 Fragaria x ananassa HOM05D001087 ORTHO05D005406 2.5e-74 283.5 377 45.4
FAN05G2313 Fragaria x ananassa HOM05D001087 ORTHO05D005406 4.3e-74 282.7 406 43.3
Pp3c14_8290 Physcomitrium patens HOM05D001087 ORTHO05D005406 2.2e-70 270.4 418 35.9
Pp3c14_8293 Physcomitrium patens HOM05D001087 ORTHO05D005406 2.2e-70 270.4 418 35.9
Pp3c10_7760 Physcomitrium patens HOM05D001087 ORTHO05D005406 2.9e-70 270.0 418 37.8
Sabra14G0106400 Salix brachista HOM05D001087 ORTHO05D005406 4.9e-70 269.2 420 42.1
A06p08730 Brassica napus HOM05D001087 ORTHO05D005406 1.3e-62 244.6 361 40.4
SMO353G0092 Selaginella moellendorffii HOM05D001087 ORTHO05D005406 4.0e-56 223.0 398 35.4
C05p10320 Brassica napus HOM05D001087 ORTHO05D005406 7.6e-55 218.8 374 38.0
Haze_14337 Corylus avellana HOM05D001087 ORTHO05D005406 5.4e-53 212.6 264 46.6
Thhalv10017610m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 5.4e-45 186.0 228 44.3
HPP92_021630 Vanilla planifolia HOM05D001087 ORTHO05D005406 5.6e-42 176.0 100 93.0
SEGI_07003 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 5.8e-39 166.0 194 45.9
Haze_14336 Corylus avellana HOM05D001087 ORTHO05D005406 8.4e-38 162.2 143 58.0
Glyma.04G126700 Glycine max HOM05D001087 ORTHO05D005406 2.1e-36 157.5 145 52.4
DCAR_000957 Daucus carota HOM05D001087 ORTHO05D005406 1.0e-35 155.2 176 47.7
CBR_g30317 Chara braunii HOM05D001087 ORTHO05D005406 3.9e-35 153.3 279 31.2
Glyma.09G128151 Glycine max HOM05D001087 ORTHO05D005406 1.3e-33 148.3 126 55.6
Nitab4.5_0005199g0050 Nicotiana tabacum HOM05D001087 ORTHO05D005406 6.2e-33 146.0 261 37.5
Peaxi162Scf00420g00943 Petunia axillaris HOM05D001087 ORTHO05D005406 1.3e-30 138.3 188 43.6
DCAR_000958 Daucus carota HOM05D001087 ORTHO05D005406 1.4e-29 134.8 169 47.9
Nitab4.5_0000136g0080 Nicotiana tabacum HOM05D001087 ORTHO05D005406 2.1e-28 131.0 252 34.9
Peaxi162Scf00420g00935 Petunia axillaris HOM05D001087 ORTHO05D005406 1.5e-26 124.8 143 45.5
Solyc02g094600.2 Solanum lycopersicum HOM05D001087 ORTHO05D005406 2.9e-22 110.5 100 57.0
SEGI_28776 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 5.5e-21 106.3 87 62.1
Nitab4.5_0000519g0380 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.8e-19 101.3 126 42.1
BcaC05g25411 Brassica carinata HOM05D001087 ORTHO05D005406 5.3e-16 89.7 99 44.4
Psat0s3545g0040 Pisum sativum HOM05D001087 ORTHO05D005406 2.0e-10 71.2 79 51.9
Os11g0543800 Oryza sativa ssp. japonica HOM05D001087 ORTHO05D005406 4.4e-10 70.1 51 62.7
Nitab4.5_0000519g0370 Nicotiana tabacum HOM05D001087 ORTHO05D005406 5.7e-10 69.7 59 55.9
BolC5t29778H Brassica oleracea HOM05D001087 ORTHO05D005406 2.6e-07 60.8 84 39.3
Lsat_1_v5_gn_5_71520 Lactuca sativa HOM05D000842 ORTHO05D000650 5.9e-07 59.7 55 56.4
Psat0s4626g0080 Pisum sativum HOM05D001087 ORTHO05D005406 5.0e-06 56.6 64 54.7


User provided reference genes

Program Settings