Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 4.1e-145 518.1 268 100.0
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 8.9e-132 473.8 250 97.2
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 3.0e-87 325.9 228 67.5
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.5e-86 323.6 228 67.5
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 5.6e-86 321.6 251 62.5
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 7.6e-83 311.2 222 66.7
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 2.9e-82 309.3 236 66.1
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 3.8e-82 308.9 265 56.6
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 4.9e-82 308.5 229 63.8
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 8.4e-82 307.8 267 55.8
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.9e-81 306.6 230 62.2
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 7.1e-81 304.7 265 55.8
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.2e-80 303.9 226 61.9
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 1.2e-80 303.9 262 62.2
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 2.7e-80 302.8 232 60.8
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 2.7e-80 302.8 267 55.1
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 3.5e-80 302.4 228 62.7
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 3.5e-80 302.4 265 54.7
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.0e-79 300.8 258 61.2
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 2.3e-79 299.7 228 60.5
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 2.3e-79 299.7 228 60.5
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.0e-79 299.3 228 61.0
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.9e-79 298.9 228 60.5
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 3.9e-79 298.9 247 59.1
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 5.1e-79 298.5 225 61.3
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 5.1e-79 298.5 263 58.9
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 6.7e-79 298.1 259 59.5
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 6.7e-79 298.1 228 60.1
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 8.7e-79 297.7 228 61.0
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.1e-78 297.4 227 62.1
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 1.9e-78 296.6 259 55.2
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 3.3e-78 295.8 239 59.0
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 5.6e-78 295.0 227 63.0
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 7.4e-78 294.7 229 61.1
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 9.6e-78 294.3 268 54.5
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 9.6e-78 294.3 233 59.7
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 9.6e-78 294.3 251 59.0
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 1.3e-77 293.9 228 58.8
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 2.1e-77 293.1 265 55.1
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.1e-77 293.1 243 58.8
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 2.1e-77 293.1 226 61.1
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 3.7e-77 292.4 233 64.8
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 4.8e-77 292.0 227 60.4
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 6.2e-77 291.6 228 64.0
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 8.1e-77 291.2 228 62.3
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 8.1e-77 291.2 250 56.8
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 8.1e-77 291.2 222 65.8
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 1.8e-76 290.0 231 58.9
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.8e-76 290.0 228 58.8
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 2.4e-76 289.7 257 55.6
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 2.4e-76 289.7 258 56.2
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 5.3e-76 288.5 228 64.0
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 9.0e-76 287.7 259 58.7
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 9.0e-76 287.7 304 49.3
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 1.2e-75 287.3 228 60.5
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.5e-75 287.0 267 54.3
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 2.0e-75 286.6 231 62.3
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 2.0e-75 286.6 232 63.8
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 2.6e-75 286.2 228 59.6
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 4.5e-75 285.4 229 62.9
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 4.5e-75 285.4 228 59.6
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 5.8e-75 285.0 235 56.2
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 7.6e-75 284.6 229 59.0
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 1.3e-74 283.9 257 57.6
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.7e-74 283.5 250 58.8
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 3.8e-74 282.3 234 58.5
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 8.4e-74 281.2 217 60.8
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 1.1e-73 280.8 239 60.7
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.4e-73 280.4 297 49.5
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 5.5e-73 278.5 265 55.1
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.2e-72 277.3 228 57.9
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.2e-72 277.3 257 57.6
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 2.1e-72 276.6 265 59.2
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.3e-71 273.9 226 62.4
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 3.0e-71 272.7 201 61.7
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 3.0e-71 272.7 259 55.2
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 1.5e-70 270.4 264 53.8
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.9e-70 270.0 257 56.0
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 2.5e-70 269.6 228 59.6
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 2.5e-70 269.6 260 51.9
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.7e-69 265.8 232 60.3
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 1.4e-68 263.8 204 62.3
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.4e-68 263.1 229 59.4
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 5.3e-68 261.9 227 59.9
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 9.0e-68 261.2 227 59.9
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 9.0e-68 261.2 239 54.8
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 1.2e-67 260.8 227 59.9
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 1.2e-67 260.8 224 55.8
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.5e-67 260.4 258 51.6
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 3.4e-67 259.2 279 50.9
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 4.5e-67 258.8 227 59.5
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 2.9e-66 256.1 222 57.2
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 2.9e-66 256.1 232 58.6
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 4.9e-66 255.4 256 52.0
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.4e-65 253.8 230 56.5
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 3.2e-65 252.7 278 50.7
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 3.5e-64 249.2 222 55.9
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 6.0e-64 248.4 225 55.1
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 5.1e-63 245.4 225 57.3
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.3e-62 242.7 225 56.9
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 6.3e-61 238.4 229 55.5
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 6.3e-61 238.4 174 60.9
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 4.1e-60 235.7 235 52.8
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 3.4e-59 232.6 226 50.4
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 5.0e-58 228.8 231 51.9
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 8.5e-58 228.0 231 51.9
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.7e-56 223.0 221 55.2
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.4e-55 220.7 238 52.1
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 8.8e-55 218.0 189 61.4
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.1e-54 217.6 224 54.5
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.1e-54 217.6 232 49.6
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 2.2e-53 213.4 197 55.8
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 8.2e-53 211.5 158 64.6
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.8e-52 210.3 227 50.7
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 3.4e-51 206.1 206 49.5
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 5.9e-51 205.3 226 48.2
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 1.3e-50 204.1 195 56.4
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 6.5e-42 175.3 132 64.4
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 2.1e-40 170.2 174 51.1
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.4e-36 156.8 143 51.7
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 1.0e-31 141.4 250 36.0
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 4.4e-30 136.0 133 49.6
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 9.1e-28 128.3 144 47.9
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.2e-26 123.6 210 35.7
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 1.2e-24 117.9 149 43.0
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 2.3e-23 113.6 137 43.8
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 9.1e-20 101.7 216 28.2
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 9.1e-20 101.7 61 67.2
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.3e-17 93.2 66 66.7
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.6e-16 89.7 177 35.6
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-11 72.8 69 44.9
SMO169G0114 Selaginella moellendorffii HOM05D003753 ORTHO05D005081 4.0e-07 59.7 148 27.0


User provided reference genes

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