Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021421 Vanilla planifolia HOM05D002516 ORTHO05D002703 2.4e-96 355.5 180 100.0
HPP92_021426 Vanilla planifolia HOM05D002994 ORTHO05D003337 6.7e-59 231.1 137 89.1
Nn1g07949 Nelumbo nucifera HOM05D002516 ORTHO05D002703 6.4e-17 91.7 155 38.1
Nn3g20050 Nelumbo nucifera HOM05D002516 ORTHO05D002703 5.9e-15 85.1 168 39.3
Hma1.2p1_0149F.1_g066360 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 1.0e-14 84.3 157 35.0
Dinv19179 Davidia involucrata HOM05D002516 ORTHO05D002703 3.0e-14 82.8 161 36.6
Actinidia09470 Actinidia chinensis HOM05D002516 ORTHO05D002703 6.6e-14 81.6 149 38.9
CSS0033368 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 2.5e-13 79.7 154 35.1
Lj1C88T6 Lonicera japonica HOM05D002516 ORTHO05D002703 1.6e-12 77.0 155 36.1
Cc01_g16770 Coffea canephora HOM05D002516 ORTHO05D002703 2.1e-12 76.6 153 35.9
Dinv12654 Davidia involucrata HOM05D002516 ORTHO05D002703 3.6e-12 75.9 161 34.2
Hma1.2p1_0226F.1_g095436 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 4.7e-12 75.5 161 34.2
TAR365G0852 Trochodendron aralioides HOM05D002516 ORTHO05D002703 6.2e-12 75.1 159 35.8
Hma1.2p1_2668F.1_g326570 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 1.4e-11 73.9 161 34.2
Rhsim13G0047300 Rhododendron simsii HOM05D002516 ORTHO05D002703 1.8e-11 73.6 175 32.6
Haze_15034 Corylus avellana HOM05D002516 ORTHO05D002703 3.1e-11 72.8 149 34.9
Hund05574 Selenicereus undatus HOM05D002516 ORTHO05D002703 3.1e-11 72.8 163 38.0
AUR62001129 Chenopodium quinoa HOM05D002516 ORTHO05D002703 7.5e-10 68.2 153 35.9
CiPaw.01G049600 Carya illinoinensis HOM05D002516 ORTHO05D002703 1.7e-09 67.0 154 36.4
Medtr4g074240 Medicago truncatula HOM05D002516 ORTHO05D002703 2.2e-09 66.6 103 39.8
TAR636G2916 Trochodendron aralioides HOM05D002516 ORTHO05D002703 2.9e-09 66.2 155 33.5
Ca_03039_v3 Cicer arietinum L. HOM05D002516 ORTHO05D002703 1.1e-08 64.3 160 34.4
MBI07_g22277_MAGBIO Magnolia biondii HOM05D002516 ORTHO05D002703 1.4e-08 63.9 157 34.4
Rhsim01G0254000 Rhododendron simsii HOM05D002516 ORTHO05D002703 1.4e-08 63.9 154 36.4
Prupe.8G199600 Prunus persica HOM05D002516 ORTHO05D002703 1.9e-08 63.5 152 33.6
SGA_v2.0_scaffold6G03500 Striga asiatica HOM05D002516 ORTHO05D002703 2.4e-08 63.2 155 36.8
PSO017G5490 Papaver somniferum HOM05D002516 ORTHO05D002703 3.2e-08 62.8 155 31.0
TPR.G21567 Trifolium pratense HOM05D002516 ORTHO05D002703 5.4e-08 62.0 157 33.1
AUR62016552 Chenopodium quinoa HOM05D002516 ORTHO05D002703 7.0e-08 61.6 155 34.8
Psat7g174120 Pisum sativum HOM05D002516 ORTHO05D002703 7.0e-08 61.6 155 33.5
HanXRQChr07g0189501 Helianthus annuus HOM05D002516 ORTHO05D002703 9.2e-08 61.2 164 33.5
Peaxi162Scf00238g00046 Petunia axillaris HOM05D002516 ORTHO05D002703 9.2e-08 61.2 153 33.3
Oeu007786.2 Olea europaea HOM05D002516 ORTHO05D002703 1.2e-07 60.8 156 34.0
Solyc09g059450.4 Solanum lycopersicum HOM05D002516 ORTHO05D002703 1.2e-07 60.8 153 34.0
Sopen09g022610 Solanum pennellii HOM05D002516 ORTHO05D002703 1.2e-07 60.8 153 34.0
vmacro02780 Vaccinium macrocarpon HOM05D002516 ORTHO05D002703 1.6e-07 60.5 169 27.8
CSS0005528 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 2.0e-07 60.1 157 33.1
EL10Ac7g17892 Beta vulgaris HOM05D002516 ORTHO05D002703 2.7e-07 59.7 163 34.4
Cpa.g.sc8.125 Carica papaya HOM05D002516 ORTHO05D002703 2.7e-07 59.7 161 34.8
Lalb_Chr10g0095071 Lupinus albus HOM05D002516 ORTHO05D002703 3.5e-07 59.3 107 38.3
PGSC0003DMG400027947 Solanum tuberosum HOM05D002516 ORTHO05D002703 3.5e-07 59.3 153 33.3
Migut.D02502 Erythranthe guttata HOM05D002516 ORTHO05D002703 4.6e-07 58.9 148 36.5
PGR083G1441 Punica granatum HOM05D002516 ORTHO05D002703 4.6e-07 58.9 152 32.9
Lj3g0007155 Lotus japonicus HOM05D002516 ORTHO05D002703 7.8e-07 58.2 163 33.7
CANSAT01G2920 Cannabis sativa HOM05D002516 ORTHO05D002703 1.0e-06 57.8 149 32.9
Potri.014G191400 Populus trichocarpa HOM05D002516 ORTHO05D002703 1.0e-06 57.8 151 33.1
Actinidia39434 Actinidia chinensis HOM05D002516 ORTHO05D002703 1.7e-06 57.0 163 30.1
Lalb_Chr19g0139301 Lupinus albus HOM05D002516 ORTHO05D002703 2.3e-06 56.6 171 31.0
Manes.13G049000 Manihot esculenta HOM05D002516 ORTHO05D002703 2.3e-06 56.6 151 31.8
FAN24G0368 Fragaria x ananassa HOM05D002516 ORTHO05D002703 3.9e-06 55.8 145 31.0
Gohir.A07G158100 Gossypium hirsutum HOM05D002516 ORTHO05D002703 3.9e-06 55.8 149 34.2
Sopen06g002720 Solanum pennellii HOM05D002516 ORTHO05D002703 3.9e-06 55.8 154 35.7
Duzib211G0537 Durio zibethinus HOM05D002516 ORTHO05D002703 5.0e-06 55.5 147 35.4
FAN27G2188 Fragaria x ananassa HOM05D002516 ORTHO05D002703 5.0e-06 55.5 145 31.7
Sc17g0002160 Simmondsia chinensis HOM05D002516 ORTHO05D002703 5.0e-06 55.5 167 31.1
HanXRQChr10g0279491 Helianthus annuus HOM05D002516 ORTHO05D002703 6.6e-06 55.1 160 30.0
Nitab4.5_0007846g0010 Nicotiana tabacum HOM05D002516 ORTHO05D002703 6.6e-06 55.1 96 40.6
RcHm_v2.0_Chr6g0284181 Rosa chinensis HOM05D002516 ORTHO05D002703 6.6e-06 55.1 150 34.7
Atru.chr2.3423 Acer truncatum HOM05D002516 ORTHO05D002703 8.6e-06 54.7 143 35.0
Atru.chr6.1421 Acer truncatum HOM05D002516 ORTHO05D002703 8.6e-06 54.7 143 35.0
PSO063G1979 Papaver somniferum HOM05D002516 ORTHO05D002703 8.6e-06 54.7 162 29.6
Solyc06g007870.3 Solanum lycopersicum HOM05D002516 ORTHO05D002703 8.6e-06 54.7 154 35.1


User provided reference genes

Program Settings