Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021368 Vanilla planifolia HOM05D000546 ORTHO05D000398 3.4e-75 285.0 158 100.0
Lalb_Chr04g0258831 Lupinus albus HOM05D000546 ORTHO05D000398 3.0e-18 95.9 174 43.1
Gohir.D01G106366 Gossypium hirsutum HOM05D000546 ORTHO05D000398 2.6e-14 82.8 144 34.7
TAR626G0042 Trochodendron aralioides HOM05D000546 ORTHO05D000398 1.7e-13 80.1 162 30.2
CDE04G2450 Ceratophyllum demersum HOM05D000546 ORTHO05D000398 6.4e-13 78.2 160 33.1
Gorai.013G040400 Gossypium raimondii HOM05D000546 ORTHO05D000398 4.1e-12 75.5 175 33.1
Lalb_Chr10g0095401 Lupinus albus HOM05D000546 ORTHO05D000398 5.4e-12 75.1 161 36.6
Psat6g096440 Pisum sativum HOM05D000546 ORTHO05D000398 5.4e-12 75.1 174 39.7
Solyc06g074150.3 Solanum lycopersicum HOM05D000546 ORTHO05D000398 9.2e-12 74.3 122 33.6
Gohir.D13G035600 Gossypium hirsutum HOM05D000546 ORTHO05D000398 2.1e-11 73.2 175 33.1
Zm00001eb009410 Zea mays HOM05D001708 ORTHO05D000398 2.7e-11 72.8 54 59.3
HPP92_002131 Vanilla planifolia HOM05D000546 ORTHO05D000398 6.0e-11 71.6 54 61.1
HPP92_002136 Vanilla planifolia HOM05D000546 ORTHO05D000398 6.0e-11 71.6 54 61.1
Gohir.A13G037300 Gossypium hirsutum HOM05D000546 ORTHO05D000398 1.3e-10 70.5 175 32.6
PGR083G2816 Punica granatum HOM05D000546 ORTHO05D000398 2.3e-10 69.7 161 34.2
Zm00001eb001800 Zea mays HOM05D000546 ORTHO05D000398 3.0e-10 69.3 54 57.4
Medtr1g034180 Medicago truncatula HOM05D000546 ORTHO05D000398 3.9e-10 68.9 165 40.0
Glyma.11G000600 Glycine max HOM05D001708 ORTHO05D001649 1.5e-09 67.0 136 39.7
QL02p006431 Quercus lobata HOM05D000546 ORTHO05D000398 1.5e-09 67.0 160 36.9
BcaC07g41736 Brassica carinata HOM05D000546 ORTHO05D000398 1.9e-09 66.6 49 61.2
Os01g0594300 Oryza sativa ssp. japonica HOM05D000546 ORTHO05D000398 1.9e-09 66.6 123 36.6
BcaB04g17707 Brassica carinata HOM05D000546 ORTHO05D000398 2.5e-09 66.2 78 42.3
BcaNung03354 Brassica carinata HOM05D000546 ORTHO05D000398 3.3e-09 65.9 45 64.4
arahy.Tifrunner.gnm1.ann1.V8PY6L Arachis hypogaea HOM05D001708 ORTHO05D001649 4.3e-09 65.5 180 36.1
MD09G1216000 Malus domestica HOM05D000546 ORTHO05D000398 4.3e-09 65.5 137 31.4
Ciclev10013921m.g Citrus clementina HOM05D000546 ORTHO05D000398 1.2e-08 63.9 51 56.9
Glyma.01G244600 Glycine max HOM05D001708 ORTHO05D001649 1.2e-08 63.9 136 30.1
Lj3g0013166 Lotus japonicus HOM05D000546 ORTHO05D000398 2.1e-08 63.2 162 30.9
Oeu007244.1 Olea europaea HOM05D000546 ORTHO05D000398 3.6e-08 62.4 40 72.5
QL11p034405 Quercus lobata HOM05D001708 ORTHO05D001649 3.6e-08 62.4 151 26.5
Sc14g0001680 Simmondsia chinensis HOM05D000546 ORTHO05D000398 4.7e-08 62.0 161 27.3
Zm00001eb161110 Zea mays HOM05D000546 ORTHO05D000398 4.7e-08 62.0 121 36.4
CANSAT25G1450 Cannabis sativa HOM05D001708 ORTHO05D001649 8.1e-08 61.2 164 25.0
Zm00001eb105520 Zea mays HOM05D000546 ORTHO05D000398 8.1e-08 61.2 126 34.1
TWI32G0480 Tripterygium wilfordii HOM05D000546 ORTHO05D000398 1.4e-07 60.5 117 35.9
Haze_17588 Corylus avellana HOM05D000546 ORTHO05D000398 1.8e-07 60.1 60 50.0
THA.LOC104824543 Tarenaya hassleriana HOM05D000546 ORTHO05D000398 1.8e-07 60.1 136 28.7
Migut.O00323 Erythranthe guttata HOM05D000546 ORTHO05D000398 2.3e-07 59.7 161 28.0
Gorai.002G130500 Gossypium raimondii HOM05D000546 ORTHO05D000398 2.3e-07 59.7 160 28.1
Zm00001eb283750 Zea mays HOM05D000546 ORTHO05D000398 2.3e-07 59.7 117 35.0
Migut.O00327 Erythranthe guttata HOM05D000546 ORTHO05D000398 3.1e-07 59.3 161 28.0
Gohir.A01G118000 Gossypium hirsutum HOM05D000546 ORTHO05D000398 3.1e-07 59.3 160 28.1
Mapoly0025s0139 Marchantia polymorpha HOM05D000546 ORTHO05D000398 3.1e-07 59.3 166 25.9
Lalb_Chr03g0029551 Lupinus albus HOM05D000546 ORTHO05D000398 4.0e-07 58.9 161 28.0
MD10G1272200 Malus domestica HOM05D000546 ORTHO05D000398 4.0e-07 58.9 57 43.9
TPR.G35420 Trifolium pratense HOM05D001708 ORTHO05D001649 4.0e-07 58.9 75 36.0
Lj4g0010331 Lotus japonicus HOM05D001708 ORTHO05D001649 5.2e-07 58.5 162 24.7
Nitab4.5_0000638g0080 Nicotiana tabacum HOM05D000546 ORTHO05D000398 5.2e-07 58.5 161 28.0
Nitab4.5_0001752g0010 Nicotiana tabacum HOM05D000546 ORTHO05D000398 5.2e-07 58.5 161 28.0
CsaV3_3G018310 Cucumis sativus L. HOM05D001708 ORTHO05D001649 6.8e-07 58.2 77 35.1
PSO210G6739 Papaver somniferum HOM05D000546 ORTHO05D000398 6.8e-07 58.2 165 33.9
Peaxi162Scf01415g00005 Petunia axillaris HOM05D000546 ORTHO05D000398 6.8e-07 58.2 161 28.0
HPP92_017372 Vanilla planifolia HOM05D000546 ORTHO05D000398 6.8e-07 58.2 64 43.8
Zm00001eb337150 Zea mays HOM05D000546 ORTHO05D000398 6.8e-07 58.2 116 35.3
BcaB02g06432 Brassica carinata HOM05D000546 ORTHO05D000398 8.9e-07 57.8 122 29.5
Cfa018485 Carpinus fangiana HOM05D000546 ORTHO05D000398 8.9e-07 57.8 34 76.5
ATR0618G020 Amborella trichopoda HOM05D000546 ORTHO05D000398 1.2e-06 57.4 34 73.5
Ciclev10013922m.g Citrus clementina HOM05D000546 ORTHO05D000398 1.2e-06 57.4 176 33.5
Dinv26499 Davidia involucrata HOM05D000546 ORTHO05D000398 1.2e-06 57.4 59 49.2
Lj2g0011897 Lotus japonicus HOM05D000546 ORTHO05D000398 1.2e-06 57.4 158 38.0
CDE03G0377 Ceratophyllum demersum HOM05D000546 ORTHO05D000398 1.5e-06 57.0 161 27.3
EL10Ac9g22313 Beta vulgaris HOM05D001708 ORTHO05D001649 2.0e-06 56.6 75 34.7
Nitab4.5_0002577g0070 Nicotiana tabacum HOM05D000546 ORTHO05D000398 2.0e-06 56.6 38 65.8
SEGI_07443 Sequoiadendron giganteum HOM05D000546 ORTHO05D000398 2.0e-06 56.6 164 25.6
PGSC0003DMG400006027 Solanum tuberosum HOM05D000546 ORTHO05D000398 2.0e-06 56.6 38 65.8
MELO3C019537.2 Cucumis melo HOM05D001708 ORTHO05D001649 2.6e-06 56.2 77 49.4
Potri.006G245600 Populus trichocarpa HOM05D000546 ORTHO05D000398 2.6e-06 56.2 59 44.1
Prupe.8G131500 Prunus persica HOM05D001708 ORTHO05D001649 2.6e-06 56.2 75 36.0
Aqoxy7G03765 Aquilegia oxysepala HOM05D000546 ORTHO05D000398 3.4e-06 55.8 40 62.5
Sopen02g015060 Solanum pennellii HOM05D001708 ORTHO05D001649 3.4e-06 55.8 76 55.3
CDE11G0685 Ceratophyllum demersum HOM05D000546 ORTHO05D000398 4.4e-06 55.5 159 25.8
ClCG02G006180 Citrullus lanatus HOM05D001708 ORTHO05D001649 4.4e-06 55.5 49 53.1
Ciclev10010678m.g Citrus clementina HOM05D000546 ORTHO05D000398 4.4e-06 55.5 34 70.6
Gohir.A07G007500 Gossypium hirsutum HOM05D000546 ORTHO05D000398 4.4e-06 55.5 34 70.6
Psat7g127120 Pisum sativum HOM05D001708 ORTHO05D001649 4.4e-06 55.5 75 36.0
Ah.10g029270 Amaranthus hybridus HOM05D000546 ORTHO05D000398 5.8e-06 55.1 34 67.6
CANSAT80G1641 Cannabis sativa HOM05D000546 ORTHO05D000398 5.8e-06 55.1 59 47.5
CAN.G341.9 Capsicum annuum HOM05D000546 ORTHO05D000398 5.8e-06 55.1 38 63.2
CARHR225530 Cardamine hirsuta HOM05D000546 ORTHO05D000398 5.8e-06 55.1 66 42.4
Cfa012871 Carpinus fangiana HOM05D000546 ORTHO05D000398 5.8e-06 55.1 34 70.6
AUR62011013 Chenopodium quinoa HOM05D000546 ORTHO05D000398 5.8e-06 55.1 34 67.6
AUR62021524 Chenopodium quinoa HOM05D000546 ORTHO05D000398 5.8e-06 55.1 34 67.6
Glyma.07G215900 Glycine max HOM05D001708 ORTHO05D001649 5.8e-06 55.1 48 45.8
MD05G1086700 Malus domestica HOM05D001708 ORTHO05D001649 5.8e-06 55.1 75 36.0
Nitab4.5_0002138g0120 Nicotiana tabacum HOM05D000546 ORTHO05D000398 5.8e-06 55.1 38 63.2
Solyc02g064940.1 Solanum lycopersicum HOM05D001708 ORTHO05D001649 5.8e-06 55.1 76 53.9
Actinidia02532 Actinidia chinensis HOM05D000546 ORTHO05D000398 7.6e-06 54.7 34 70.6
CSS0021545 Camellia sinensis var. sinensis HOM05D001708 ORTHO05D001649 7.6e-06 54.7 126 28.6
Haze_21241 Corylus avellana HOM05D000546 ORTHO05D000398 7.6e-06 54.7 34 70.6
HanXRQChr05g0143181 Helianthus annuus HOM05D000546 ORTHO05D000398 7.6e-06 54.7 35 65.7
CsaV3_6G000730 Cucumis sativus L. HOM05D000546 ORTHO05D000398 9.9e-06 54.3 175 33.1
ECA240G0608 Erigeron canadensis HOM05D000546 ORTHO05D000398 9.9e-06 54.3 34 73.5
Glyma.06G036001 Glycine max HOM05D000546 ORTHO05D000398 9.9e-06 54.3 34 70.6
HanXRQChr03g0068311 Helianthus annuus HOM05D000546 ORTHO05D000398 9.9e-06 54.3 34 67.6
Oeu021236.1 Olea europaea HOM05D000546 ORTHO05D000398 9.9e-06 54.3 33 72.7
QL11p005692 Quercus lobata HOM05D000546 ORTHO05D000398 9.9e-06 54.3 34 67.6
Sabra06G0192200 Salix brachista HOM05D000546 ORTHO05D000398 9.9e-06 54.3 34 67.6


User provided reference genes

Program Settings