Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 5.6e-284 980.3 513 100.0
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 9.3e-130 468.0 412 59.5
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.9e-127 460.3 366 63.7
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 2.5e-127 459.9 374 61.5
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 1.1e-125 454.5 470 53.6
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 3.1e-125 453.0 361 62.9
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 4.0e-125 452.6 368 62.0
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 1.2e-124 451.1 365 62.7
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 3.4e-124 449.5 377 59.4
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 5.8e-124 448.7 368 60.3
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 4.9e-123 445.7 368 62.0
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 8.4e-123 444.9 425 56.9
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 2.5e-122 443.4 368 61.7
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 3.2e-122 443.0 429 55.5
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 9.3e-122 441.4 411 56.0
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 1.3e-120 437.6 432 54.6
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 1.5e-119 434.1 368 59.8
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 4.3e-119 432.6 368 57.9
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 1.3e-118 431.0 518 50.4
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 2.8e-118 429.9 425 54.8
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.1e-117 427.9 368 58.7
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 5.3e-117 425.6 368 58.7
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 5.3e-117 425.6 483 50.5
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 1.5e-116 424.1 364 58.2
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 1.5e-116 424.1 364 59.1
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 2.0e-116 423.7 415 53.5
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.4e-116 422.9 368 58.2
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 1.3e-115 421.0 365 58.9
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 1.1e-114 417.9 400 55.8
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 4.6e-113 412.5 368 57.3
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 4.6e-113 412.5 361 56.8
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 1.3e-112 411.0 361 59.6
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 8.7e-112 408.3 413 53.8
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 1.5e-111 407.5 365 58.1
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 5.7e-111 405.6 389 54.0
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 2.4e-109 400.2 378 54.5
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 2.6e-108 396.7 455 48.8
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 7.7e-108 395.2 398 52.3
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 7.7e-108 395.2 327 61.2
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.0e-107 394.8 327 60.6
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 3.8e-107 392.9 400 51.8
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 8.5e-107 391.7 430 50.7
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 5.5e-106 389.0 422 51.7
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 5.5e-106 389.0 418 50.7
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 2.7e-105 386.7 363 55.9
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 4.6e-105 386.0 469 48.0
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.4e-104 384.4 432 49.5
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 1.4e-104 384.4 310 63.2
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 2.5e-103 380.2 368 54.3
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 4.3e-103 379.4 358 53.9
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 9.7e-103 378.3 365 54.8
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 2.8e-102 376.7 358 53.1
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 4.8e-102 375.9 368 53.3
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 8.2e-102 375.2 358 53.9
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 8.2e-102 375.2 460 47.4
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 1.4e-101 374.4 351 54.7
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 2.4e-101 373.6 361 53.7
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 4.1e-101 372.9 416 48.6
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 5.3e-101 372.5 447 47.4
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 1.2e-100 371.3 361 54.8
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.4e-100 369.8 360 53.6
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 4.5e-100 369.4 361 55.1
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 7.7e-100 368.6 368 53.5
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 1.3e-99 367.9 358 52.8
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 6.5e-99 365.5 361 52.4
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 6.5e-99 365.5 361 52.4
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 6.5e-99 365.5 428 49.3
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 3.2e-98 363.2 361 52.6
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 3.2e-98 363.2 304 59.9
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 5.5e-98 362.5 361 52.4
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 1.2e-97 361.3 424 48.1
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 2.1e-97 360.5 388 50.3
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 1.4e-96 357.8 323 57.6
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 2.0e-95 354.0 365 50.7
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 3.7e-94 349.7 418 45.9
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 4.1e-93 346.3 311 56.9
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 4.5e-92 342.8 473 44.6
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 7.7e-92 342.0 352 50.9
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 1.1e-90 338.2 381 50.4
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 9.4e-90 335.1 316 55.1
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 6.1e-89 332.4 348 49.1
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 8.0e-89 332.0 386 46.9
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 2.6e-87 327.0 386 44.3
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 3.1e-85 320.1 360 49.7
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 7.0e-85 318.9 359 46.8
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 7.0e-85 318.9 322 52.8
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 1.1e-77 295.0 365 44.4
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.8e-77 294.3 495 37.0
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 6.6e-67 259.2 186 72.0
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 2.3e-56 224.2 394 39.3
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 9.8e-55 218.8 187 61.0
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 1.3e-54 218.4 187 59.4
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 8.3e-54 215.7 166 68.1
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 2.7e-52 210.7 321 44.5
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 3.0e-51 207.2 268 44.8
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 1.6e-49 201.4 202 51.5
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 1.5e-47 194.9 172 52.9
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.0e-47 194.5 153 62.1
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 4.1e-45 186.8 166 59.0
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 7.8e-44 182.6 258 41.1
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 9.5e-42 175.6 197 46.7
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 8.1e-41 172.6 166 50.0
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 2.3e-40 171.0 176 47.2
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.1e-40 170.6 197 46.2
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 5.2e-40 169.9 223 39.9
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 5.2e-40 169.9 253 38.7
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 1.5e-39 168.3 325 39.4
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 1.5e-39 168.3 120 70.0
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 9.9e-39 165.6 306 36.6
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 6.4e-38 162.9 142 54.9
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 6.0e-36 156.4 176 44.3
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 3.0e-35 154.1 106 74.5
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 6.9e-32 142.9 171 45.6
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.2e-31 142.1 223 39.5
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.4e-31 140.6 159 47.2
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 1.7e-30 138.3 145 46.2
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.6e-28 130.2 141 48.9
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 1.1e-26 125.6 103 65.0
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.2e-22 111.3 81 74.1
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 3.5e-20 104.0 120 45.0
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 5.3e-16 90.1 89 48.3
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 5.5e-13 80.1 75 53.3
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 3.9e-11 73.9 137 28.5
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 9.6e-10 69.3 58 56.9
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.4e-08 64.7 41 65.9
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.4e-08 64.7 41 65.9


User provided reference genes

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