Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 1.3e-163 579.7 302 100.0
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.3e-131 473.4 300 79.0
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 3.2e-130 468.8 300 78.7
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 9.3e-130 467.2 305 77.7
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.2e-129 466.8 298 78.5
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.6e-129 464.9 301 76.7
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 7.9e-129 464.2 298 79.2
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 7.9e-129 464.2 300 78.3
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 3.0e-128 462.2 301 77.1
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 3.0e-128 462.2 305 76.7
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 3.9e-128 461.8 303 76.6
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.9e-128 461.8 309 76.1
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.1e-127 460.3 302 76.2
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 1.9e-127 459.5 290 78.6
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.5e-127 459.1 300 77.0
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 4.3e-127 458.4 285 80.4
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 5.7e-127 458.0 295 78.0
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 7.4e-127 457.6 286 79.7
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 7.4e-127 457.6 302 75.5
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 9.7e-127 457.2 305 76.1
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 9.7e-127 457.2 300 77.0
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 2.2e-126 456.1 288 78.1
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 2.2e-126 456.1 301 77.4
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 2.8e-126 455.7 293 78.2
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 2.8e-126 455.7 300 76.7
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 3.7e-126 455.3 293 77.8
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 3.7e-126 455.3 293 77.8
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 3.7e-126 455.3 293 77.8
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 3.7e-126 455.3 294 78.6
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 3.7e-126 455.3 293 77.5
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 3.7e-126 455.3 300 76.7
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 3.7e-126 455.3 305 76.7
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 4.8e-126 454.9 290 77.9
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 8.2e-126 454.1 295 76.9
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 8.2e-126 454.1 288 77.8
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 8.2e-126 454.1 286 78.7
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.4e-125 453.4 300 76.0
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.8e-125 453.0 300 76.0
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.8e-125 453.0 303 75.2
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.8e-125 453.0 302 75.5
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 3.1e-125 452.2 300 75.3
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 3.1e-125 452.2 286 78.3
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 4.1e-125 451.8 300 75.0
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 4.1e-125 451.8 291 78.0
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 5.3e-125 451.4 312 74.7
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 5.3e-125 451.4 295 78.3
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 5.3e-125 451.4 287 78.0
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 6.9e-125 451.1 300 75.3
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 6.9e-125 451.1 287 77.7
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 9.0e-125 450.7 295 77.3
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.2e-124 450.3 300 75.0
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.2e-124 450.3 301 76.7
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.2e-124 450.3 287 78.0
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 1.5e-124 449.9 290 77.6
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 2.0e-124 449.5 300 74.7
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 2.6e-124 449.1 293 76.1
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.6e-124 449.1 289 78.5
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 2.6e-124 449.1 288 76.7
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 3.4e-124 448.7 285 77.5
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 3.4e-124 448.7 300 75.3
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 3.4e-124 448.7 287 78.0
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 4.5e-124 448.4 300 75.0
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 4.5e-124 448.4 300 75.0
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 4.5e-124 448.4 308 74.0
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 7.7e-124 447.6 298 75.5
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 7.7e-124 447.6 293 77.1
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 7.7e-124 447.6 285 77.5
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 1.0e-123 447.2 300 74.7
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.0e-123 447.2 305 75.1
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 1.3e-123 446.8 287 77.4
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.3e-123 446.8 288 77.4
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.7e-123 446.4 302 75.2
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.7e-123 446.4 289 77.5
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 2.9e-123 445.7 303 77.9
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 2.9e-123 445.7 295 76.3
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.9e-123 445.7 290 77.2
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 3.8e-123 445.3 285 77.9
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.0e-123 444.9 289 77.2
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 5.0e-123 444.9 293 75.4
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 5.0e-123 444.9 285 76.8
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 5.0e-123 444.9 303 74.6
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 6.5e-123 444.5 285 77.9
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 8.5e-123 444.1 287 77.4
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.1e-122 443.7 302 78.5
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.1e-122 443.7 286 76.9
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.4e-122 443.4 285 75.8
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.4e-122 443.4 298 75.8
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 2.5e-122 442.6 305 74.4
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 3.2e-122 442.2 300 75.3
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 4.2e-122 441.8 300 75.7
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 5.5e-122 441.4 288 76.4
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 5.5e-122 441.4 298 77.2
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 7.2e-122 441.0 293 75.8
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 9.4e-122 440.7 287 77.4
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 6.1e-121 438.0 301 73.4
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 6.1e-121 438.0 293 74.1
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.4e-120 436.8 300 75.0
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 1.8e-120 436.4 297 74.1
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 1.8e-120 436.4 305 74.4
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 6.7e-120 434.5 255 82.0
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 8.8e-120 434.1 277 78.7
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 8.8e-120 434.1 298 74.5
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 1.1e-119 433.7 287 76.3
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 3.3e-119 432.2 299 74.9
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 7.4e-119 431.0 296 73.6
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 2.8e-118 429.1 291 73.5
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 8.2e-118 427.6 293 72.7
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 6.9e-117 424.5 297 73.1
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 6.9e-117 424.5 295 72.9
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 3.4e-116 422.2 286 73.4
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 6.5e-115 417.9 271 79.7
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 8.5e-115 417.5 290 73.1
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 3.2e-114 415.6 293 74.1
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 4.2e-114 415.2 318 69.5
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 7.2e-114 414.5 285 75.1
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 3.6e-113 412.1 312 71.2
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 1.4e-112 410.2 285 73.0
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 1.5e-111 406.8 256 79.7
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 2.0e-111 406.4 287 73.2
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 5.7e-111 404.8 281 70.5
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.2e-107 392.9 261 76.2
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 7.2e-106 387.9 369 58.8
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 2.7e-105 386.0 283 70.3
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.0e-104 382.1 216 83.8
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.0e-104 382.1 216 83.8
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 2.0e-103 379.8 219 84.0
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 2.6e-103 379.4 290 66.2
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 2.6e-103 379.4 268 72.4
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 5.7e-103 378.3 250 72.8
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 6.3e-102 374.8 219 82.2
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 6.3e-102 374.8 283 69.3
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 8.2e-102 374.4 251 71.7
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 7.7e-100 367.9 250 69.2
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 4.0e-96 355.5 248 68.5
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 5.4e-93 345.1 304 63.5
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 9.1e-93 344.4 198 82.3
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 4.5e-92 342.0 229 75.5
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 8.3e-86 321.2 215 75.8
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 7.0e-85 318.2 180 86.7
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.7e-83 313.5 208 76.4
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 5.0e-83 312.0 180 82.2
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 7.0e-77 291.6 172 83.1
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 9.5e-74 281.2 192 73.4
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 5.4e-69 265.4 219 66.7
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 3.5e-68 262.7 152 84.2
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 6.8e-64 248.4 194 64.9
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 2.3e-59 233.4 145 80.0
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-57 227.6 209 63.2
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 6.4e-46 188.7 118 77.1
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 2.1e-44 183.7 207 50.2
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 1.9e-42 177.2 157 59.9
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 1.3e-41 174.5 135 67.4
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.8e-40 170.6 105 79.0
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 7.6e-39 165.2 179 54.7
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 3.9e-35 152.9 96 78.1
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 3.1e-32 143.3 86 76.7
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 5.5e-29 132.5 305 33.8
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.1e-25 120.6 86 69.8
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 3.7e-25 119.8 170 41.8
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 6.2e-25 119.0 196 40.8
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 2.4e-24 117.1 66 87.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 2.4e-24 117.1 66 87.9
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 1.9e-21 107.5 91 63.7
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 1.7e-14 84.3 79 57.0
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 5.0e-14 82.8 156 37.8
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 1.4e-13 81.3 53 69.8
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-12 77.8 85 49.4
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 4.6e-12 76.3 84 52.4
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.9e-11 73.2 69 60.9
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.9e-11 73.2 69 60.9
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 3.3e-10 70.1 84 53.6
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 4.8e-09 66.2 95 43.2
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 6.3e-09 65.9 81 51.9
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 8.2e-09 65.5 110 37.3
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 9.0e-08 62.0 43 74.4
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 1.5e-07 61.2 53 60.4
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.6e-07 60.5 34 79.4
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.4e-07 60.1 33 87.9
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 3.4e-07 60.1 57 50.9


User provided reference genes

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