Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 4.0e-86 322.0 247 100.0
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 7.6e-29 131.7 251 64.9
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 1.3e-28 131.0 248 62.5
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 1.9e-27 127.1 251 62.2
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 4.6e-26 122.5 254 61.0
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 7.9e-26 121.7 248 60.9
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 2.3e-25 120.2 85 64.7
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 3.0e-25 119.8 257 61.5
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.9e-25 119.4 243 60.5
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 6.7e-25 118.6 248 62.5
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 8.7e-25 118.2 251 63.3
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 8.7e-25 118.2 234 62.0
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 1.1e-24 117.9 252 63.1
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.1e-24 117.9 249 60.6
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.5e-24 117.5 254 58.7
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 1.9e-24 117.1 256 61.3
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.9e-24 117.1 232 63.4
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 2.5e-24 116.7 238 63.0
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 2.5e-24 116.7 253 62.1
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 2.5e-24 116.7 256 48.8
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 4.3e-24 115.9 84 69.0
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 7.4e-24 115.2 244 61.1
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.6e-23 114.0 233 63.9
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.1e-23 113.6 232 59.9
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.1e-23 113.6 240 61.7
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 2.8e-23 113.2 250 60.8
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.7e-23 112.8 254 59.8
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.7e-23 112.8 235 63.0
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 6.2e-23 112.1 245 60.4
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 6.2e-23 112.1 234 61.5
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 1.1e-22 111.3 253 60.5
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.1e-22 111.3 243 60.5
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.4e-22 110.9 255 57.6
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 1.8e-22 110.5 242 61.6
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 2.4e-22 110.2 76 67.1
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 3.1e-22 109.8 79 64.6
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 5.3e-22 109.0 74 68.9
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 5.3e-22 109.0 74 68.9
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 5.3e-22 109.0 74 68.9
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 5.3e-22 109.0 235 61.7
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 5.3e-22 109.0 250 58.8
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 1.2e-21 107.8 74 68.9
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 1.2e-21 107.8 74 68.9
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 1.2e-21 107.8 243 60.5
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 1.2e-21 107.8 77 64.9
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.5e-21 107.5 232 60.8
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 1.5e-21 107.5 248 60.5
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.5e-21 107.5 260 59.2
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 2.0e-21 107.1 255 58.8
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 2.6e-21 106.7 71 69.0
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 2.6e-21 106.7 243 60.1
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.4e-21 106.3 231 62.8
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 4.5e-21 105.9 75 66.7
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 4.5e-21 105.9 71 70.4
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 5.8e-21 105.5 70 70.0
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 7.6e-21 105.1 250 62.4
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 1.0e-20 104.8 75 73.3
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.3e-20 104.4 232 61.2
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.7e-20 104.0 250 57.2
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 2.2e-20 103.6 245 59.6
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 3.8e-20 102.8 263 59.3
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 6.5e-20 102.1 91 58.2
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 6.5e-20 102.1 240 55.8
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 8.4e-20 101.7 230 61.3
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 1.1e-19 101.3 185 69.2
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.1e-19 101.3 231 61.9
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.4e-19 100.9 251 55.8
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 1.9e-19 100.5 271 57.9
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 3.2e-19 99.8 235 60.9
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 4.2e-19 99.4 193 65.8
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 4.2e-19 99.4 193 65.8
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 4.2e-19 99.4 238 60.5
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.2e-19 99.4 226 61.1
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 7.1e-19 98.6 243 58.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 7.1e-19 98.6 226 61.1
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.1e-19 98.6 231 61.0
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.2e-18 97.8 227 60.8
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.2e-18 97.8 243 58.0
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 1.6e-18 97.4 254 57.9
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 2.1e-18 97.1 212 60.4
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.1e-18 97.1 230 59.6
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.1e-18 97.1 69 65.2
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 2.7e-18 96.7 230 60.9
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 6.0e-18 95.5 222 62.6
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 2.3e-17 93.6 232 57.8
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 2.3e-17 93.6 230 60.9
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 3.9e-17 92.8 244 43.4
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 3.9e-17 92.8 108 48.1
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 5.1e-17 92.4 288 52.1
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.5e-16 90.9 193 48.7
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 2.5e-16 90.1 236 58.5
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 3.3e-16 89.7 265 55.8
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 3.3e-16 89.7 256 56.2
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 5.7e-16 89.0 79 53.2
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 3.7e-15 86.3 72 61.1
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 4.8e-15 85.9 86 53.5
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 3.1e-14 83.2 68 57.4
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 2.0e-13 80.5 85 51.8
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 2.2e-12 77.0 77 51.9
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 4.2e-11 72.8 267 52.8
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.2e-10 71.2 63 58.7
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 6.7e-09 65.5 64 53.1
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 8.7e-09 65.1 223 54.7
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 8.7e-09 65.1 65 49.2
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 1.1e-08 64.7 264 50.8
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 9.7e-08 61.6 195 40.5
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 1.3e-07 61.2 201 63.7
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 1.3e-07 61.2 206 62.1
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.6e-07 60.8 380 39.2
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 4.8e-07 59.3 45 57.8
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.4e-06 57.8 34 73.5
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.4e-06 57.0 34 73.5
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 3.1e-06 56.6 192 57.8


User provided reference genes

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