Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020723 Vanilla planifolia HOM05D007340 ORTHO05D008979 1.6e-216 756.5 615 100.0
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 2.8e-32 144.4 288 32.3
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 2.8e-32 144.4 347 32.6
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 2.8e-32 144.4 299 33.8
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 8.2e-32 142.9 299 33.8
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 2.0e-30 138.3 317 33.4
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 2.6e-30 137.9 299 33.1
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 8.5e-29 132.9 315 31.4
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 7.2e-28 129.8 287 31.7
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 9.4e-28 129.4 283 31.4
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 1.1e-25 122.5 299 30.8
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 3.3e-25 120.9 318 30.2
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 2.2e-24 118.2 315 29.2
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 8.2e-24 116.3 282 29.4
Zm00001eb017770 Zea mays HOM05D049345 ORTHO05D008979 1.4e-23 115.5 151 44.4
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 2.4e-23 114.8 271 31.4
Solyc01g080310.4 Solanum lycopersicum HOM05D007340 ORTHO05D008979 9.1e-23 112.8 270 30.7
Os03g0363700 Oryza sativa ssp. japonica HOM05D049345 ORTHO05D008979 2.0e-22 111.7 143 43.4
TPR.G40710 Trifolium pratense HOM05D007340 ORTHO05D008979 1.7e-21 108.6 132 41.7
AL6G30300 Arabidopsis lyrata HOM05D007340 ORTHO05D008979 3.6e-19 100.9 300 28.7
Migut.G00250 Erythranthe guttata HOM05D007340 ORTHO05D008979 1.0e-18 99.4 243 30.0
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 1.8e-18 98.6 261 31.0
CAN.G522.11 Capsicum annuum HOM05D007340 ORTHO05D008979 5.2e-18 97.1 239 32.6
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 3.4e-17 94.4 252 29.4
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 9.7e-17 92.8 218 31.2
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 9.7e-17 92.8 234 31.2
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 1.3e-16 92.4 314 27.4
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 6.3e-16 90.1 164 31.7
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 8.3e-16 89.7 206 32.5
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.8e-15 88.6 249 29.7
Lj4P768T34 Lonicera japonica HOM05D007340 ORTHO05D008979 3.1e-15 87.8 228 30.3
ClCG05G001120 Citrullus lanatus HOM05D007340 ORTHO05D008979 5.3e-15 87.0 221 31.2
Cpa.g.sc16.57 Carica papaya HOM05D007340 ORTHO05D008979 1.2e-14 85.9 246 27.2
Haze_00999 Corylus avellana HOM05D007340 ORTHO05D008979 1.6e-14 85.5 225 31.6
BcaB08g36633 Brassica carinata HOM05D007340 ORTHO05D008979 2.0e-14 85.1 263 29.7
Cfa015550 Carpinus fangiana HOM05D007340 ORTHO05D008979 3.5e-14 84.3 217 31.8
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 3.5e-14 84.3 219 32.9
Oeu021055.1 Olea europaea HOM05D007340 ORTHO05D008979 3.5e-14 84.3 215 28.4
MELO3C006065.2 Cucumis melo HOM05D007340 ORTHO05D008979 4.5e-14 84.0 221 29.4
AUR62021475 Chenopodium quinoa HOM05D007340 ORTHO05D008979 5.9e-14 83.6 230 30.9
CARHR194060 Cardamine hirsuta HOM05D007340 ORTHO05D008979 7.7e-14 83.2 265 27.2
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 7.7e-14 83.2 314 24.8
BcaB01g04883 Brassica carinata HOM05D007340 ORTHO05D008979 1.7e-13 82.0 144 35.4
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 2.9e-13 81.3 218 28.0
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 2.9e-13 81.3 223 26.0
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 3.8e-13 80.9 217 30.4
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 3.8e-13 80.9 215 27.9
AT5G18950 Arabidopsis thaliana HOM05D007340 ORTHO05D008979 5.0e-13 80.5 255 27.5
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 5.0e-13 80.5 247 28.7
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 8.5e-13 79.7 287 24.0
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 1.1e-12 79.3 218 29.4
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 1.5e-12 79.0 318 27.0
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 1.9e-12 78.6 238 28.2
A10p20720 Brassica napus HOM05D007340 ORTHO05D008979 5.5e-12 77.0 258 26.7
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 9.4e-12 76.3 218 27.1
PGR065G0011 Punica granatum HOM05D007340 ORTHO05D008979 9.4e-12 76.3 227 28.2
CsaV3_3G008450 Cucumis sativus L. HOM05D007340 ORTHO05D008979 2.1e-11 75.1 225 27.6
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 2.1e-11 75.1 252 27.4
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 2.7e-11 74.7 251 27.5
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 4.7e-11 73.9 223 27.8
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 1.4e-10 72.4 191 30.4
arahy.Tifrunner.gnm1.ann1.GQ8ZCN Arachis hypogaea HOM05D002890 ORTHO05D009847 1.2e-09 69.3 243 25.9
BraA10t44135Z Brassica rapa HOM05D007340 ORTHO05D008979 1.2e-09 69.3 250 25.2
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 1.5e-09 68.9 206 28.2
BcaC04g18636 Brassica carinata HOM05D007340 ORTHO05D008979 2.0e-09 68.6 239 26.4
Sp6g25440 Schrenkiella parvula HOM05D007340 ORTHO05D008979 5.7e-09 67.0 244 26.2
TWI63G0498 Tripterygium wilfordii HOM05D002890 ORTHO05D009847 1.7e-08 65.5 254 24.4
ClCG03G004730 Citrullus lanatus HOM05D002890 ORTHO05D009847 3.7e-08 64.3 252 24.6
CAN.G53.43 Capsicum annuum HOM05D000891 ORTHO05D000761 4.8e-08 63.9 122 32.0
C09p57580 Brassica napus HOM05D007340 ORTHO05D008979 6.3e-08 63.5 247 25.9
Rhsim10G0193900 Rhododendron simsii HOM05D006556 ORTHO05D008146 8.3e-08 63.2 144 34.0
BolC9t58627H Brassica oleracea HOM05D007340 ORTHO05D008979 1.4e-07 62.4 247 25.9
Sp5g29730 Schrenkiella parvula HOM05D002453 ORTHO05D002107 4.1e-07 60.8 134 25.4
Aqoxy3G03369 Aquilegia oxysepala HOM05D002453 ORTHO05D002107 5.4e-07 60.5 118 26.3
MBI04_g06224_MAGBIO Magnolia biondii HOM05D000250 ORTHO05D002477 5.4e-07 60.5 297 25.6
SEGI_26115 Sequoiadendron giganteum HOM05D006819 ORTHO05D008763 5.4e-07 60.5 263 26.2
arahy.Tifrunner.gnm1.ann1.NUL68I Arachis hypogaea HOM05D002890 ORTHO05D009847 7.0e-07 60.1 243 25.5
PSO566G0116 Papaver somniferum HOM05D007128 ORTHO05D009059 9.1e-07 59.7 114 28.9
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 9.1e-07 59.7 299 20.7
Lj4g0000542 Lotus japonicus HOM05D002890 ORTHO05D009847 1.6e-06 58.9 208 26.9
Sabra02G0188800 Salix brachista HOM05D007486 ORTHO05D003673 1.6e-06 58.9 131 27.5
C05p15050 Brassica napus HOM05D007552 ORTHO05D009397 2.0e-06 58.5 139 33.1
THA.LOC104812502 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 2.0e-06 58.5 139 28.8
Haze_20536 Corylus avellana HOM05D002890 ORTHO05D009847 4.5e-06 57.4 106 27.4
Duzib264G1293 Durio zibethinus HOM05D000891 ORTHO05D000761 4.5e-06 57.4 123 26.8
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 4.5e-06 57.4 99 31.3
PGR142G0525 Punica granatum HOM05D000891 ORTHO05D000761 4.5e-06 57.4 133 29.3
Rhsim13G0154100 Rhododendron simsii HOM05D002890 ORTHO05D009847 4.5e-06 57.4 106 30.2
ClCG03G008000 Citrullus lanatus HOM05D002986 ORTHO05D007611 5.9e-06 57.0 142 26.8
Eucgr.F03554 Eucalyptus grandis HOM05D006705 ORTHO05D008179 5.9e-06 57.0 82 36.6
Ah.05g177410 Amaranthus hybridus HOM05D000891 ORTHO05D000761 7.7e-06 56.6 130 29.2


User provided reference genes

Program Settings