Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 6.6e-254 880.2 433 100.0
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 4.9e-124 448.7 446 55.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 6.4e-124 448.4 445 55.7
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 2.7e-122 443.0 461 51.6
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 4.6e-122 442.2 463 52.1
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 6.0e-122 441.8 442 53.4
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.0e-121 441.0 439 54.9
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.8e-121 440.3 278 72.7
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.8e-121 440.3 453 53.0
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 3.0e-121 439.5 445 52.8
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 3.9e-121 439.1 464 51.3
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 3.9e-121 439.1 267 74.2
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 6.7e-121 438.3 282 72.3
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.7e-121 438.3 450 52.2
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 6.7e-121 438.3 267 74.9
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.1e-120 437.6 461 52.9
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.1e-120 437.6 444 53.6
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.1e-120 437.6 278 74.1
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-120 437.6 448 52.7
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.1e-120 437.6 455 53.6
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.5e-120 437.2 439 53.8
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 1.5e-120 437.2 475 51.4
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.9e-120 436.8 277 74.0
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 5.6e-120 435.3 441 52.6
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 9.6e-120 434.5 443 53.5
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 9.6e-120 434.5 453 52.3
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.3e-119 434.1 448 52.0
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 2.1e-119 433.3 447 53.0
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 2.1e-119 433.3 453 51.9
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.1e-119 433.3 449 52.6
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 2.1e-119 433.3 277 71.8
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 2.1e-119 433.3 441 52.4
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.8e-119 433.0 452 52.4
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 3.7e-119 432.6 450 51.8
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 4.8e-119 432.2 445 52.1
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 6.2e-119 431.8 454 52.6
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.1e-118 431.0 278 70.9
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.1e-118 431.0 278 71.9
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.4e-118 430.6 443 53.0
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 1.4e-118 430.6 266 72.9
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.8e-118 430.3 441 54.4
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 2.4e-118 429.9 439 53.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 3.1e-118 429.5 440 53.0
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 3.1e-118 429.5 278 71.6
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 6.9e-118 428.3 267 75.3
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 6.9e-118 428.3 298 68.1
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 9.0e-118 427.9 464 50.6
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.2e-117 427.6 296 68.6
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.5e-117 427.2 444 52.9
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 2.6e-117 426.4 441 52.2
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 2.6e-117 426.4 446 50.9
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 3.4e-117 426.0 267 74.9
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.5e-117 425.6 266 72.2
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 4.5e-117 425.6 278 71.6
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 7.6e-117 424.9 279 71.7
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 7.6e-117 424.9 446 52.0
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.0e-116 424.5 267 74.9
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.0e-116 424.5 278 71.9
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.3e-116 424.1 272 73.2
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.3e-116 424.1 272 73.2
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 1.7e-116 423.7 440 53.2
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 2.2e-116 423.3 464 51.3
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.2e-116 423.3 272 73.2
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 2.2e-116 423.3 447 53.0
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 2.9e-116 422.9 451 51.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 3.8e-116 422.5 272 70.6
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 4.9e-116 422.2 451 51.9
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 4.9e-116 422.2 276 71.0
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 4.9e-116 422.2 439 51.9
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.1e-115 421.0 447 52.8
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.4e-115 420.6 279 69.2
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-115 420.6 452 50.4
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 4.2e-115 419.1 434 52.1
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 5.5e-115 418.7 450 51.8
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 7.1e-115 418.3 453 49.7
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.6e-114 417.2 446 52.5
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.1e-114 416.8 452 52.0
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.7e-114 416.4 462 50.4
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.3e-113 414.1 278 70.9
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 3.9e-113 412.5 450 50.9
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 3.9e-113 412.5 272 71.0
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 7.4e-112 408.3 446 50.4
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 9.6e-112 407.9 272 69.5
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.4e-110 404.1 272 68.4
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 6.9e-110 401.7 272 67.6
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.4e-107 394.0 501 45.9
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 5.5e-107 392.1 276 67.4
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 5.1e-105 385.6 439 50.8
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 4.5e-101 372.5 272 64.3
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.5e-99 365.5 273 61.2
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.5e-99 365.5 273 61.2
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 8.8e-97 358.2 270 62.6
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.1e-96 357.8 436 44.5
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 8.2e-95 351.7 231 69.7
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.1e-94 351.3 244 68.0
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.8e-94 350.5 273 61.2
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.5e-93 347.4 280 58.6
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.7e-90 336.7 218 73.4
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 1.4e-89 334.3 266 60.2
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 4.5e-85 319.3 221 66.5
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.5e-83 314.3 200 72.5
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.6e-77 294.3 205 65.4
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 2.6e-77 293.5 195 71.3
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.3e-76 291.2 357 48.5
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.4e-70 271.2 179 68.7
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 2.0e-69 267.3 265 49.4
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 2.2e-68 263.8 356 43.0
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 6.1e-66 255.8 269 44.6
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 2.6e-64 250.4 168 67.3
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 2.6e-64 250.4 168 67.3
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 5.2e-49 199.5 118 74.6
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 8.3e-47 192.2 119 71.4
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 1.3e-39 168.3 154 53.2
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 5.8e-32 142.9 94 67.0
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 7.3e-27 125.9 270 34.1
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 1.2e-26 125.2 86 68.6
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.1e-22 112.1 68 72.1
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 5.4e-22 109.8 117 48.7
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.5e-21 107.1 77 64.9
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 3.6e-18 97.1 74 62.2
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 6.4e-15 86.3 76 50.0
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 3.2e-14 84.0 52 73.1
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.2e-08 65.5 120 30.0
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.8e-07 60.5 57 49.1
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 8.4e-07 59.3 38 55.3


User provided reference genes

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