Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020402 Vanilla planifolia HOM05D002412 ORTHO05D002516 3.8e-102 374.8 181 100.0
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 3.7e-17 92.4 162 40.1
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 8.3e-17 91.3 157 37.6
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.4e-16 90.5 164 39.0
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 1.9e-16 90.1 164 39.0
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 9.2e-16 87.8 159 39.0
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 1.0e-14 84.3 171 37.4
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.0e-14 84.3 148 37.8
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.0e-14 84.3 164 39.0
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.9e-14 82.4 148 37.8
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 5.1e-14 82.0 145 37.9
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 1.5e-13 80.5 162 36.4
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 1.5e-13 80.5 140 40.0
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 2.5e-13 79.7 156 40.4
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 2.5e-13 79.7 168 35.7
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 3.3e-13 79.3 138 40.6
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 4.3e-13 79.0 146 37.7
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 4.3e-13 79.0 160 35.6
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 4.3e-13 79.0 152 35.5
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 4.3e-13 79.0 146 37.0
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 4.3e-13 79.0 171 35.7
Solyc04g077690.3 Solanum lycopersicum HOM05D002412 ORTHO05D002516 4.3e-13 79.0 160 36.2
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 5.6e-13 78.6 171 37.4
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 7.3e-13 78.2 164 36.0
Sopen04g031330 Solanum pennellii HOM05D002412 ORTHO05D002516 9.6e-13 77.8 164 35.4
Oeu020549.2 Olea europaea HOM05D002412 ORTHO05D002516 1.2e-12 77.4 138 37.7
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.6e-12 77.0 147 38.8
Potri.009G086600 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.6e-12 77.0 178 35.4
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 1.6e-12 77.0 154 39.0
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 1.6e-12 77.0 161 35.4
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 2.1e-12 76.6 145 40.0
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 2.8e-12 76.3 178 34.3
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 3.6e-12 75.9 142 36.6
Nn5g30629 Nelumbo nucifera HOM05D002412 ORTHO05D002516 3.6e-12 75.9 170 34.1
Glyma.01G242100 Glycine max HOM05D002412 ORTHO05D002516 4.7e-12 75.5 152 36.2
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 6.2e-12 75.1 156 37.8
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 6.2e-12 75.1 139 39.6
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 8.1e-12 74.7 130 38.5
Nitab4.5_0007781g0010 Nicotiana tabacum HOM05D002412 ORTHO05D002516 8.1e-12 74.7 159 32.1
SalBow6G4199 Salvia bowleyana HOM05D002412 ORTHO05D002516 8.1e-12 74.7 144 38.2
Gohir.A12G019300 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.1e-11 74.3 165 35.2
Sabra09G0066300 Salix brachista HOM05D002412 ORTHO05D002516 1.1e-11 74.3 173 36.4
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 1.4e-11 73.9 151 35.1
Gohir.D12G019500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.4e-11 73.9 162 35.8
Gorai.008G019800 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.4e-11 73.9 162 35.8
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 1.4e-11 73.9 156 37.2
PGSC0003DMG400010615 Solanum tuberosum HOM05D002412 ORTHO05D002516 1.8e-11 73.6 125 39.2
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 2.4e-11 73.2 155 36.1
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 2.4e-11 73.2 151 33.8
FAN20G2155 Fragaria x ananassa HOM05D002412 ORTHO05D002516 3.1e-11 72.8 163 36.2
Prupe.8G147000 Prunus persica HOM05D002412 ORTHO05D002516 3.1e-11 72.8 176 33.5
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 4.0e-11 72.4 119 37.8
Peaxi162Scf00081g00269 Petunia axillaris HOM05D002412 ORTHO05D002516 4.0e-11 72.4 164 36.0
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.0e-11 72.4 163 38.0
TWI59G0380 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 4.0e-11 72.4 176 37.5
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 5.2e-11 72.0 157 36.3
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 6.8e-11 71.6 161 33.5
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 6.8e-11 71.6 158 36.1
Nitab4.5_0002040g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 6.8e-11 71.6 156 32.1
Psat4g227320 Pisum sativum HOM05D002412 ORTHO05D002516 6.8e-11 71.6 144 34.7
Rhsim05G0091500 Rhododendron simsii HOM05D002412 ORTHO05D002516 6.8e-11 71.6 113 43.4
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 8.9e-11 71.2 155 36.1
MELO3C016826.2 Cucumis melo HOM05D002412 ORTHO05D002516 1.2e-10 70.9 159 36.5
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 1.2e-10 70.9 186 33.9
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 1.2e-10 70.9 149 34.2
Sabra16G0182100 Salix brachista HOM05D002412 ORTHO05D002516 1.5e-10 70.5 181 34.3
Phvul.002G051300 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 2.0e-10 70.1 155 33.5
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.0e-10 70.1 149 35.6
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.0e-10 70.1 149 35.6
Potri.001G292100 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.6e-10 69.7 190 32.1
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 3.4e-10 69.3 150 34.7
DCAR_029176 Daucus carota HOM05D002412 ORTHO05D002516 4.4e-10 68.9 132 37.1
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.4e-10 68.9 163 32.5
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 4.4e-10 68.9 109 45.0
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 5.8e-10 68.6 130 40.8
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 7.6e-10 68.2 156 33.3
VMungo1215G2231 Vigna mungo HOM05D002412 ORTHO05D002516 7.6e-10 68.2 157 31.8
Lj1g0009349 Lotus japonicus HOM05D002412 ORTHO05D002516 9.9e-10 67.8 168 36.9
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 9.9e-10 67.8 149 35.6
Sed0010289 Sechium edule HOM05D002412 ORTHO05D002516 9.9e-10 67.8 143 37.8
CsaV3_4G035130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 1.3e-09 67.4 166 35.5
Lalb_Chr11g0062941 Lupinus albus HOM05D002412 ORTHO05D002516 1.3e-09 67.4 142 35.9
TPR.G33675 Trifolium pratense HOM05D002412 ORTHO05D002516 1.3e-09 67.4 157 37.6
ATR0739G138 Amborella trichopoda HOM05D002412 ORTHO05D002516 1.7e-09 67.0 131 42.0
CiPaw.07G173700 Carya illinoinensis HOM05D002412 ORTHO05D002516 1.7e-09 67.0 157 33.8
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 1.7e-09 67.0 158 34.2
ClCG10G010090 Citrullus lanatus HOM05D002412 ORTHO05D002516 1.7e-09 67.0 168 35.1
DCAR_012823 Daucus carota HOM05D002412 ORTHO05D002516 1.7e-09 67.0 114 41.2
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.7e-09 67.0 163 31.3
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.7e-09 67.0 114 38.6
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 1.7e-09 67.0 161 31.7
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 2.2e-09 66.6 163 31.3
THA.LOC104807210 Tarenaya hassleriana HOM05D002412 ORTHO05D002516 2.2e-09 66.6 169 34.3
COL.COLO4_28483 Corchorus olitorius HOM05D002412 ORTHO05D002516 2.9e-09 66.2 151 36.4
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 2.9e-09 66.2 130 36.2
ECA236G2487 Erigeron canadensis HOM05D002412 ORTHO05D002516 2.9e-09 66.2 174 31.6
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.9e-09 66.2 161 34.2
Nitab4.5_0003953g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.9e-09 66.2 158 31.6
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 3.8e-09 65.9 152 32.9
Solyc12g088300.2 Solanum lycopersicum HOM05D002412 ORTHO05D002516 4.9e-09 65.5 182 31.9
Actinidia34355 Actinidia chinensis HOM05D002412 ORTHO05D002516 6.4e-09 65.1 152 34.9
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 6.4e-09 65.1 123 38.2
CSS0003834 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 6.4e-09 65.1 184 30.4
DCAR_020053 Daucus carota HOM05D002412 ORTHO05D002516 6.4e-09 65.1 147 36.1
Peaxi162Scf00003g00288 Petunia axillaris HOM05D002412 ORTHO05D002516 6.4e-09 65.1 112 40.2
Glyma.10G256100 Glycine max HOM05D002412 ORTHO05D002516 1.1e-08 64.3 160 33.1
Lalb_Chr21g0308011 Lupinus albus HOM05D002412 ORTHO05D002516 1.1e-08 64.3 162 33.3
Psat0ss7070g0040 Pisum sativum HOM05D002412 ORTHO05D002516 1.1e-08 64.3 162 35.8
TWI56G0446 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.1e-08 64.3 157 35.0
CSS0009619 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 1.4e-08 63.9 160 32.5
Ca_24361_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 1.4e-08 63.9 117 38.5
CsaV3_4G000130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 2.4e-08 63.2 127 40.2
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 2.4e-08 63.2 175 31.4
Sopen12g030300 Solanum pennellii HOM05D002412 ORTHO05D002516 2.4e-08 63.2 158 32.9
DCAR_001741 Daucus carota HOM05D002412 ORTHO05D002516 4.2e-08 62.4 167 29.3
Medtr1g106080 Medicago truncatula HOM05D002412 ORTHO05D002516 4.2e-08 62.4 164 31.7
AL7G17660 Arabidopsis lyrata HOM05D002412 ORTHO05D002516 5.4e-08 62.0 163 31.9
AUR62041661 Chenopodium quinoa HOM05D002412 ORTHO05D002516 5.4e-08 62.0 148 38.5
TPR.G21149 Trifolium pratense HOM05D002412 ORTHO05D002516 5.4e-08 62.0 150 34.0
TWI12G0423 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 5.4e-08 62.0 156 31.4
BraA01t00437Z Brassica rapa HOM05D002412 ORTHO05D002516 7.1e-08 61.6 159 32.7
CARHR241890 Cardamine hirsuta HOM05D002412 ORTHO05D002516 7.1e-08 61.6 161 33.5
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 7.1e-08 61.6 156 31.4
vmacro01953 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 7.1e-08 61.6 132 35.6
ClCG08G016590 Citrullus lanatus HOM05D002412 ORTHO05D002516 9.3e-08 61.2 135 37.8
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 9.3e-08 61.2 125 36.8
MELO3C010796.2 Cucumis melo HOM05D002412 ORTHO05D002516 9.3e-08 61.2 136 36.8
Sc15g0005620 Simmondsia chinensis HOM05D002412 ORTHO05D002516 9.3e-08 61.2 159 34.6
PGSC0003DMG400025836 Solanum tuberosum HOM05D002412 ORTHO05D002516 1.2e-07 60.8 160 32.5
MSTRG.1024 Avicennia marina HOM05D002412 ORTHO05D002516 2.1e-07 60.1 138 34.1
MELO3C018019.2 Cucumis melo HOM05D002412 ORTHO05D002516 2.7e-07 59.7 127 38.6
Glyma.20G135500 Glycine max HOM05D002412 ORTHO05D002516 2.7e-07 59.7 163 31.3
unitig_46.g17922 Utricularia gibba HOM05D001230 ORTHO05D001067 2.7e-07 59.7 100 43.0
A01p04520 Brassica napus HOM05D002412 ORTHO05D002516 3.5e-07 59.3 157 32.5
DCAR_019349 Daucus carota HOM05D001207 ORTHO05D009015 3.5e-07 59.3 114 40.4
FAN15G1065 Fragaria x ananassa HOM05D002412 ORTHO05D002516 3.5e-07 59.3 187 29.9
Lj4C72T9 Lonicera japonica HOM05D002412 ORTHO05D002516 3.5e-07 59.3 113 39.8
Lalb_Chr02g0144931 Lupinus albus HOM05D002412 ORTHO05D002516 3.5e-07 59.3 157 31.2
PSO170G3219 Papaver somniferum HOM05D002412 ORTHO05D002516 3.5e-07 59.3 133 36.8
Phvul.007G046700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 3.5e-07 59.3 152 32.9
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 3.5e-07 59.3 151 34.4
CiPaw.06G164900 Carya illinoinensis HOM05D002412 ORTHO05D002516 4.6e-07 58.9 160 30.0
CsaV3_2G026020 Cucumis sativus L. HOM05D002412 ORTHO05D002516 4.6e-07 58.9 143 38.5
Sed0020406 Sechium edule HOM05D002412 ORTHO05D002516 4.6e-07 58.9 116 39.7
PGSC0003DMG401011556 Solanum tuberosum HOM05D002412 ORTHO05D002516 4.6e-07 58.9 158 31.6
MSTRG.20224 Avicennia marina HOM05D002412 ORTHO05D002516 6.0e-07 58.5 161 31.1
Lalb_Chr06g0165021 Lupinus albus HOM05D002412 ORTHO05D002516 6.0e-07 58.5 116 37.9
Oeu053627.1 Olea europaea HOM05D002412 ORTHO05D002516 6.0e-07 58.5 115 36.5
Phvul.001G028800 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 6.0e-07 58.5 107 38.3
AT4G33800 Arabidopsis thaliana HOM05D002412 ORTHO05D002516 7.8e-07 58.2 159 30.8
CAN.G606.66 Capsicum annuum HOM05D002412 ORTHO05D002516 7.8e-07 58.2 154 30.5
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 7.8e-07 58.2 122 35.2
Haze_22419 Corylus avellana HOM05D002412 ORTHO05D002516 7.8e-07 58.2 121 36.4
PSO017G0848 Papaver somniferum HOM05D002412 ORTHO05D002516 7.8e-07 58.2 133 36.1
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 1.0e-06 57.8 153 34.6
Oeu037507.3 Olea europaea HOM05D006761 ORTHO05D002516 1.0e-06 57.8 129 38.8
Rhsim05G0092300 Rhododendron simsii HOM05D002412 ORTHO05D002516 1.0e-06 57.8 117 37.6
Sed0010950 Sechium edule HOM05D002412 ORTHO05D002516 1.3e-06 57.4 95 41.1
VMungo0720G0862 Vigna mungo HOM05D002412 ORTHO05D002516 1.3e-06 57.4 162 30.9
GSVIVG01009322001 Vitis vinifera HOM05D002412 ORTHO05D002516 1.3e-06 57.4 99 40.4
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 1.7e-06 57.0 157 35.7
Gohir.A06G024600 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.7e-06 57.0 146 37.0
MSTRG.16674 Avicennia marina HOM05D002412 ORTHO05D002516 2.3e-06 56.6 163 31.9
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 2.3e-06 56.6 154 33.8
Gohir.D06G021700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.0e-06 56.2 146 37.7
C07p59890 Brassica napus HOM05D002412 ORTHO05D002516 3.9e-06 55.8 154 35.7
BolC7t46433H Brassica oleracea HOM05D002412 ORTHO05D002516 3.9e-06 55.8 154 35.7
Migut.C00481 Erythranthe guttata HOM05D062627 ORTHO05D002516 3.9e-06 55.8 121 35.5
Psat6g214680 Pisum sativum HOM05D002412 ORTHO05D002516 3.9e-06 55.8 161 32.9
Atru.chr13.848 Acer truncatum HOM05D002412 ORTHO05D002516 5.1e-06 55.5 149 34.2
ClCG05G020680 Citrullus lanatus HOM05D002412 ORTHO05D002516 5.1e-06 55.5 158 32.9
MSTRG.24380 Avicennia marina HOM05D002412 ORTHO05D002516 6.6e-06 55.1 116 34.5
A03p62330 Brassica napus HOM05D002412 ORTHO05D002516 6.6e-06 55.1 151 35.1
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 6.6e-06 55.1 151 35.1
DCAR_009875 Daucus carota HOM05D002412 ORTHO05D002516 6.6e-06 55.1 146 33.6
Thhalv10026460m.g Eutrema salsugineum HOM05D002412 ORTHO05D002516 8.7e-06 54.7 153 31.4
Medtr5g005230 Medicago truncatula HOM05D002412 ORTHO05D002516 8.7e-06 54.7 63 50.8
Oeu048571.1 Olea europaea HOM05D002412 ORTHO05D002516 8.7e-06 54.7 109 39.4


User provided reference genes

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