Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 2.2e-111 405.6 200 100.0
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 1.5e-72 276.6 174 75.9
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 4.5e-72 275.0 175 74.3
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 2.2e-71 272.7 174 73.0
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 2.9e-71 272.3 177 71.8
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 6.1e-69 264.6 173 72.8
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 7.9e-69 264.2 174 71.3
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 1.8e-68 263.1 172 73.3
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 3.0e-68 262.3 174 71.8
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 3.0e-68 262.3 174 71.3
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 6.7e-68 261.2 177 71.8
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 6.7e-68 261.2 181 70.2
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 8.8e-68 260.8 174 71.8
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 8.8e-68 260.8 178 69.7
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 8.8e-68 260.8 174 72.4
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 8.8e-68 260.8 179 69.8
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 2.0e-67 259.6 176 70.5
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 2.6e-67 259.2 174 71.3
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 2.6e-67 259.2 178 70.2
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 3.3e-67 258.8 175 69.7
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 3.3e-67 258.8 187 67.4
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 4.4e-67 258.5 174 70.1
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 5.7e-67 258.1 174 70.7
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 9.7e-67 257.3 178 68.5
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.7e-66 256.5 176 69.3
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 2.2e-66 256.1 184 66.8
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.2e-66 256.1 179 69.3
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 3.7e-66 255.4 179 67.6
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 4.8e-66 255.0 174 70.1
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 4.8e-66 255.0 174 69.5
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 6.3e-66 254.6 174 69.0
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 6.3e-66 254.6 178 68.0
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 1.1e-65 253.8 191 68.1
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.4e-65 253.4 175 70.9
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.4e-65 253.4 178 67.4
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 2.4e-65 252.7 179 65.4
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 2.4e-65 252.7 174 70.1
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 3.1e-65 252.3 178 69.7
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 4.1e-65 251.9 178 68.5
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 5.3e-65 251.5 178 68.5
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 7.0e-65 251.1 174 68.4
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.2e-64 250.4 173 69.9
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.2e-64 250.4 174 69.0
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.2e-64 250.4 173 69.4
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 2.0e-64 249.6 177 68.9
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 2.0e-64 249.6 167 71.9
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 4.5e-64 248.4 173 68.2
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 4.5e-64 248.4 177 67.2
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 4.5e-64 248.4 174 70.1
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 7.7e-64 247.7 174 70.1
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 7.7e-64 247.7 180 67.2
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.0e-63 247.3 175 66.3
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.7e-63 246.5 173 67.6
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 2.9e-63 245.7 173 67.6
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 3.8e-63 245.4 180 64.4
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 5.0e-63 245.0 172 68.0
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 6.5e-63 244.6 173 67.6
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 8.5e-63 244.2 177 67.2
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.5e-62 243.4 179 64.8
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.5e-62 243.4 182 62.6
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 1.9e-62 243.0 180 63.3
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.5e-62 242.7 173 68.8
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 4.2e-62 241.9 173 67.6
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 5.5e-62 241.5 181 63.0
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 2.1e-61 239.6 174 64.9
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.0e-60 237.3 155 71.6
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.0e-60 237.3 185 63.2
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 5.2e-60 235.0 174 66.7
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 5.2e-60 235.0 174 63.8
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 8.8e-60 234.2 178 66.3
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 7.5e-59 231.1 141 78.0
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 9.7e-59 230.7 184 60.9
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 2.2e-58 229.6 150 73.3
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.7e-58 228.8 152 73.0
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.1e-57 227.3 237 52.3
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.3e-55 220.3 153 68.6
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 1.5e-54 216.9 207 56.5
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 7.2e-54 214.5 143 70.6
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 8.0e-53 211.1 177 60.5
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 2.6e-51 206.1 166 61.4
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 1.6e-48 196.8 168 57.1
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 7.7e-48 194.5 180 58.9
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.3e-47 193.7 305 38.4
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.3e-47 193.7 305 38.4
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 3.6e-45 185.7 168 54.2
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 3.6e-45 185.7 326 36.5
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 4.4e-43 178.7 111 72.1
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 4.9e-42 175.3 118 72.0
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 4.9e-42 175.3 118 74.6
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 1.0e-39 167.5 120 70.0
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 6.6e-39 164.9 170 51.2
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.6e-37 160.2 131 59.5
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 8.0e-37 157.9 174 50.6
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.2e-35 154.1 121 62.8
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.5e-35 153.7 185 45.4
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 1.6e-29 133.7 273 30.4
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 8.9e-28 127.9 80 68.8
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 1.5e-27 127.1 197 43.1
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.1e-25 120.9 87 70.1
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 7.8e-24 114.8 107 54.2
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.4e-17 94.0 67 70.1
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 9.5e-14 81.3 129 38.8
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 8.1e-13 78.2 171 33.3
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.8e-12 77.0 55 67.3
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 1.5e-11 73.9 53 66.0
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 3.8e-10 69.3 55 61.8
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 1.1e-09 67.8 49 69.4
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 2.1e-08 63.5 98 37.8
SEGI_18113 Sequoiadendron giganteum HOM05D043080 ORTHO05D008995 1.1e-06 57.8 47 63.8
SEGI_20442 Sequoiadendron giganteum HOM05D043080 ORTHO05D008995 1.1e-06 57.8 47 63.8


User provided reference genes

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