Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020357 Vanilla planifolia HOM05D004029 ORTHO05D004613 6.2e-67 257.3 128 100.0
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 3.9e-45 184.9 121 76.9
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 6.7e-45 184.1 120 76.7
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 1.1e-44 183.3 121 75.2
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 1.1e-44 183.3 121 75.2
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.5e-44 183.0 121 75.2
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 2.5e-44 182.2 121 74.4
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 3.3e-44 181.8 120 75.8
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 4.3e-44 181.4 121 75.2
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 5.7e-44 181.0 121 74.4
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 5.7e-44 181.0 120 76.7
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 7.4e-44 180.6 120 75.0
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 9.7e-44 180.3 121 72.7
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 1.3e-43 179.9 120 75.8
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 1.3e-43 179.9 120 74.2
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 1.6e-43 179.5 120 75.0
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 1.6e-43 179.5 121 74.4
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 2.2e-43 179.1 121 76.0
TAR627G0860 Trochodendron aralioides HOM05D004029 ORTHO05D004613 2.8e-43 178.7 120 74.2
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 3.7e-43 178.3 120 73.3
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 3.7e-43 178.3 120 74.2
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 3.7e-43 178.3 121 74.4
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 3.7e-43 178.3 121 75.2
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 4.8e-43 177.9 120 74.2
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 4.8e-43 177.9 120 76.7
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 8.2e-43 177.2 120 74.2
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 8.2e-43 177.2 120 74.2
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 8.2e-43 177.2 121 72.7
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 8.2e-43 177.2 121 71.9
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 8.2e-43 177.2 121 71.9
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 1.1e-42 176.8 121 71.9
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 1.4e-42 176.4 121 72.7
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 1.4e-42 176.4 121 74.4
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 1.4e-42 176.4 120 76.7
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 1.4e-42 176.4 120 73.3
MELO3C018224.2 Cucumis melo HOM05D004029 ORTHO05D004613 1.8e-42 176.0 121 71.9
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 1.8e-42 176.0 121 71.9
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 2.4e-42 175.6 121 72.7
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 2.4e-42 175.6 121 74.4
CDE05G1182 Ceratophyllum demersum HOM05D004029 ORTHO05D004613 4.1e-42 174.9 125 68.8
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 4.1e-42 174.9 121 74.4
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 4.1e-42 174.9 121 72.7
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 5.3e-42 174.5 125 69.6
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 6.9e-42 174.1 120 73.3
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 6.9e-42 174.1 120 73.3
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 9.0e-42 173.7 121 73.6
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 9.0e-42 173.7 120 72.5
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 2.0e-41 172.6 121 68.6
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 2.0e-41 172.6 120 73.3
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 3.4e-41 171.8 120 72.5
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 3.4e-41 171.8 120 71.7
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 4.5e-41 171.4 120 71.7
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 4.5e-41 171.4 120 70.0
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 5.9e-41 171.0 120 74.2
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 5.9e-41 171.0 125 68.8
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 7.7e-41 170.6 121 70.2
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 1.0e-40 170.2 121 71.1
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 1.0e-40 170.2 121 70.2
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 1.3e-40 169.9 120 71.7
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 1.3e-40 169.9 120 71.7
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 1.3e-40 169.9 121 73.6
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 1.7e-40 169.5 125 67.2
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 1.7e-40 169.5 121 69.4
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 1.7e-40 169.5 125 69.6
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 1.7e-40 169.5 121 70.2
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 1.7e-40 169.5 120 72.5
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 2.2e-40 169.1 121 70.2
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 2.2e-40 169.1 121 70.2
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 2.2e-40 169.1 121 70.2
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 2.9e-40 168.7 121 69.4
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 2.9e-40 168.7 121 70.2
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 2.9e-40 168.7 121 69.4
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 2.9e-40 168.7 121 69.4
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 2.9e-40 168.7 121 70.2
SEGI_15865 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 2.9e-40 168.7 125 67.2
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 3.8e-40 168.3 121 70.2
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 5.0e-40 167.9 121 69.4
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 5.0e-40 167.9 125 68.0
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 5.0e-40 167.9 120 66.7
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 6.5e-40 167.5 121 69.4
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 6.5e-40 167.5 125 68.0
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 6.5e-40 167.5 121 68.6
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 6.5e-40 167.5 120 66.7
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 8.5e-40 167.2 121 69.4
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 8.5e-40 167.2 121 69.4
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 8.5e-40 167.2 121 69.4
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 8.5e-40 167.2 121 69.4
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.4e-39 166.4 121 70.2
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 1.4e-39 166.4 120 70.8
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 1.9e-39 166.0 121 69.4
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 2.5e-39 165.6 121 68.6
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 2.5e-39 165.6 120 69.2
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 2.5e-39 165.6 121 70.2
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 2.5e-39 165.6 125 66.4
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 3.2e-39 165.2 125 67.2
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 5.5e-39 164.5 125 67.2
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 1.2e-38 163.3 125 67.2
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 1.6e-38 162.9 120 72.5
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 1.6e-38 162.9 121 69.4
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.6e-38 162.9 121 69.4
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.6e-38 162.9 121 69.4
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 3.6e-38 161.8 120 70.8
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 4.6e-38 161.4 120 68.3
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 1.8e-37 159.5 120 67.5
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 2.3e-37 159.1 125 66.4
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 2.3e-37 159.1 125 66.4
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.0e-37 158.7 125 66.4
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 7.4e-36 154.1 120 67.5
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 1.7e-35 152.9 125 58.4
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 4.8e-35 151.4 120 65.8
ATR0693G140 Amborella trichopoda HOM05D004029 ORTHO05D004613 1.8e-34 149.4 104 71.2
Psat1g176800 Pisum sativum HOM05D004029 ORTHO05D004613 1.8e-34 149.4 106 69.8
Psat1g176880 Pisum sativum HOM05D004029 ORTHO05D004613 5.3e-34 147.9 105 69.5
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 6.9e-34 147.5 125 56.0
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 2.2e-32 142.5 125 55.2
SMO115G0239 Selaginella moellendorffii HOM05D004029 ORTHO05D004613 2.2e-32 142.5 125 57.6
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 3.8e-24 115.2 126 44.4
Dinv08327 Davidia involucrata HOM05D004029 ORTHO05D004613 1.1e-23 113.6 112 54.5
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 3.6e-22 108.6 87 64.4
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 1.8e-21 106.3 79 68.4
Gohir.1Z049574 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.6e-09 66.6 55 60.0


User provided reference genes

Program Settings