Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020338 Vanilla planifolia HOM05D000274 ORTHO05D002552 1.8e-53 212.2 101 100.0
HPP92_028400 Vanilla planifolia HOM05D000274 ORTHO05D002552 7.6e-44 180.3 101 85.1
HPP92_028425 Vanilla planifolia HOM05D000274 ORTHO05D002552 7.6e-44 180.3 101 85.1
HPP92_022278 Vanilla planifolia HOM05D000274 ORTHO05D002552 2.7e-41 171.8 101 83.2
Sed0002260 Sechium edule HOM05D000274 ORTHO05D002552 4.5e-12 74.7 73 47.9
Sed0019404 Sechium edule HOM05D000274 ORTHO05D002552 4.5e-12 74.7 73 47.9
Sed0022936 Sechium edule HOM05D000274 ORTHO05D002552 4.5e-12 74.7 73 47.9
MELO3C027089.2 Cucumis melo HOM05D000274 ORTHO05D002552 7.7e-12 73.9 73 49.3
Sc02g0004580 Simmondsia chinensis HOM05D000274 ORTHO05D002552 7.7e-12 73.9 73 46.6
Phvul.002G090301 Phaseolus vulgaris HOM05D000274 ORTHO05D002552 1.0e-11 73.6 73 47.9
ATR0303G006 Amborella trichopoda HOM05D000274 ORTHO05D002552 1.3e-11 73.2 73 47.9
PSO548G0031 Papaver somniferum HOM05D000274 ORTHO05D002552 1.3e-11 73.2 77 44.2
RcHm_v2.0_CPg0501991 Rosa chinensis HOM05D000274 ORTHO05D002552 1.3e-11 73.2 73 46.6
Sc24g0000880 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.7e-11 72.8 73 46.6
ATCG00670 Arabidopsis thaliana HOM05D000274 ORTHO05D002552 2.2e-11 72.4 73 46.6
CARHR282180 Cardamine hirsuta HOM05D000274 ORTHO05D002552 2.9e-11 72.0 73 45.2
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 2.9e-11 72.0 70 45.7
PGR111G0023 Punica granatum HOM05D000274 ORTHO05D002552 2.9e-11 72.0 73 45.2
Cfa021574 Carpinus fangiana HOM05D000274 ORTHO05D002552 3.8e-11 71.6 73 43.8
COL.COLO4_02977 Corchorus olitorius HOM05D000274 ORTHO05D002552 3.8e-11 71.6 73 45.2
COL.COLO4_03028 Corchorus olitorius HOM05D000274 ORTHO05D002552 3.8e-11 71.6 73 45.2
COL.COLO4_03061 Corchorus olitorius HOM05D000274 ORTHO05D002552 3.8e-11 71.6 73 45.2
COL.COLO4_04073 Corchorus olitorius HOM05D000274 ORTHO05D002552 3.8e-11 71.6 73 45.2
AL2G21640 Arabidopsis lyrata HOM05D000274 ORTHO05D002552 5.0e-11 71.2 73 45.2
EL10Ac5g13040 Beta vulgaris HOM05D000274 ORTHO05D002552 5.0e-11 71.2 73 45.2
EL10As12g24030 Beta vulgaris HOM05D000274 ORTHO05D002552 5.0e-11 71.2 73 45.2
MBI18_g10796_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 6.5e-11 70.9 74 43.2
Gohir.A05G285000 Gossypium hirsutum HOM05D000274 ORTHO05D002552 8.5e-11 70.5 70 47.1
Gohir.D01G102021 Gossypium hirsutum HOM05D000274 ORTHO05D002552 8.5e-11 70.5 70 47.1
Gohir.D06G018300 Gossypium hirsutum HOM05D000274 ORTHO05D002552 8.5e-11 70.5 70 47.1
Gorai.009G282800 Gossypium raimondii HOM05D000274 ORTHO05D002552 8.5e-11 70.5 70 47.1
HanXRQChr04g0095101 Helianthus annuus HOM05D000274 ORTHO05D002552 1.1e-10 70.1 73 45.2
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 1.1e-10 70.1 70 44.3
HanXRQChr04g0094301 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-10 69.7 73 43.8
Sc09g0009710 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.5e-10 69.7 73 45.2
ATR1132G067 Amborella trichopoda HOM05D000274 ORTHO05D002552 1.9e-10 69.3 74 43.2
BcaC03g15273 Brassica carinata HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
BcaC07g42433 Brassica carinata HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
BNapus_Darmor_BZH_scaffold_287p00220 Brassica napus HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
C02p28700 Brassica napus HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
C02p43600 Brassica napus HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
C06p22930 Brassica napus HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
C06p23060 Brassica napus HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
BolSC29t60600H Brassica oleracea HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
BolSC35t60659H Brassica oleracea HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
BolSC46t61010H Brassica oleracea HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
BraSC138t45563Z Brassica rapa HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
Gohir.D06G104800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.9e-10 69.3 70 45.7
Lalb_Chr07g0192041 Lupinus albus HOM05D000274 ORTHO05D002552 1.9e-10 69.3 73 43.8
BraSC103t45477Z Brassica rapa HOM05D000274 ORTHO05D002552 2.5e-10 68.9 70 45.7
HanXRQChr00c0314g0573521 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
HanXRQChr01g0020281 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
HanXRQChr10g0283621 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
HanXRQChr10g0284311 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
HanXRQChr10g0289321 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
HanXRQChr10g0318131 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
HanXRQChr11g0326901 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
HanXRQCPg0580111 Helianthus annuus HOM05D000274 ORTHO05D002552 2.5e-10 68.9 73 43.8
MBI06_g25326_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 2.5e-10 68.9 77 41.6
DCAR_032510 Daucus carota HOM05D000274 ORTHO05D002552 3.2e-10 68.6 70 45.7
Gohir.A12G229201 Gossypium hirsutum HOM05D000274 ORTHO05D002552 3.2e-10 68.6 70 45.7
Lsat_1_v5_gn_9_50981 Lactuca sativa HOM05D000274 ORTHO05D002552 3.2e-10 68.6 73 43.8
SabraPtG0003900 Salix brachista HOM05D000274 ORTHO05D002552 3.2e-10 68.6 70 45.7
SalBow6G1627 Salvia bowleyana HOM05D000274 ORTHO05D002552 4.2e-10 68.2 73 42.5
ECA074G0006 Erigeron canadensis HOM05D000274 ORTHO05D002552 5.5e-10 67.8 73 42.5
LjContig00318g0024179 Lotus japonicus HOM05D000274 ORTHO05D002552 5.5e-10 67.8 73 42.5
arahy.Tifrunner.gnm1.ann1.002YPW Arachis hypogaea HOM05D000274 ORTHO05D002552 7.2e-10 67.4 70 42.9
arahy.Tifrunner.gnm1.ann1.3I6E4U Arachis hypogaea HOM05D000274 ORTHO05D002552 7.2e-10 67.4 70 42.9
arahy.Tifrunner.gnm1.ann1.8S8FMR Arachis hypogaea HOM05D000274 ORTHO05D002552 7.2e-10 67.4 70 42.9
arahy.Tifrunner.gnm1.ann1.JE9GG4 Arachis hypogaea HOM05D000274 ORTHO05D002552 7.2e-10 67.4 70 42.9
arahy.Tifrunner.gnm1.ann1.KX9QRC Arachis hypogaea HOM05D000274 ORTHO05D002552 7.2e-10 67.4 70 42.9
C04p42950 Brassica napus HOM05D000274 ORTHO05D002552 7.2e-10 67.4 73 42.5
BolC4t25865H Brassica oleracea HOM05D000274 ORTHO05D002552 7.2e-10 67.4 73 42.5
SalBow1G7090 Salvia bowleyana HOM05D000274 ORTHO05D002552 7.2e-10 67.4 73 42.5
Gohir.D06G113800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 9.4e-10 67.0 70 45.7
Nitab4.5_0005769g0060 Nicotiana tabacum HOM05D000274 ORTHO05D002552 9.4e-10 67.0 72 41.7
HanXRQChr11g0345211 Helianthus annuus HOM05D000274 ORTHO05D002552 1.2e-09 66.6 73 42.5
MD11G1294400 Malus domestica HOM05D000274 ORTHO05D002552 2.1e-09 65.9 70 44.3
arahy.Tifrunner.gnm1.ann1.H8UXH3 Arachis hypogaea HOM05D000274 ORTHO05D002552 3.6e-09 65.1 70 42.9
EL10Ac1g01444 Beta vulgaris HOM05D000274 ORTHO05D002552 3.6e-09 65.1 73 42.5
Eucgr.I00671 Eucalyptus grandis HOM05D000274 ORTHO05D002552 4.7e-09 64.7 73 39.7
Nitab4.5_0010531g0050 Nicotiana tabacum HOM05D000274 ORTHO05D002552 1.0e-08 63.5 73 41.1
Gohir.D02G116125 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.8e-08 62.8 68 42.6
C09p40540 Brassica napus HOM05D000274 ORTHO05D002552 3.0e-08 62.0 73 39.7
Zm00001eb039170 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb255900 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb434890 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb435080 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb435150 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb435370 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb437160 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb439970 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Zm00001eb440350 Zea mays HOM05D000274 ORTHO05D002552 3.0e-08 62.0 78 37.2
Sed0002969 Sechium edule HOM05D000274 ORTHO05D002552 4.0e-08 61.6 65 44.6
Lalb_Chr03g0038761 Lupinus albus HOM05D000274 ORTHO05D002552 5.2e-08 61.2 73 38.4
Medtr0002s0730 Medicago truncatula HOM05D000274 ORTHO05D002552 6.7e-08 60.8 73 38.4
CAN.G1739.8 Capsicum annuum HOM05D000274 ORTHO05D002552 8.8e-08 60.5 73 38.4
Hund10283 Selenicereus undatus HOM05D000274 ORTHO05D002552 8.8e-08 60.5 82 40.2
HanXRQChr06g0177591 Helianthus annuus HOM05D000274 ORTHO05D002552 1.1e-07 60.1 73 38.4
BcaB02g11359 Brassica carinata HOM05D000274 ORTHO05D002552 1.5e-07 59.7 71 39.4
Solyc00g500023.1 Solanum lycopersicum HOM05D000274 ORTHO05D002552 1.5e-07 59.7 79 38.0
Duzib026G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib086G0003 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib124G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib125G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib162G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib185G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib225G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib252G0003 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Duzib275G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 2.0e-07 59.3 68 38.2
Gorai.002G210500 Gossypium raimondii HOM05D000274 ORTHO05D002552 2.0e-07 59.3 70 41.4
MBI13_g29602_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 2.0e-07 59.3 65 43.1
SMO086G0017 Selaginella moellendorffii HOM05D000274 ORTHO05D002552 2.6e-07 58.9 70 38.6
Ciclev10003424m.g Citrus clementina HOM05D000274 ORTHO05D002552 3.3e-07 58.5 70 42.9
Hund12884 Selenicereus undatus HOM05D000274 ORTHO05D002552 3.3e-07 58.5 83 39.8
Gohir.D09G093050 Gossypium hirsutum HOM05D000274 ORTHO05D002552 4.4e-07 58.2 76 40.8
CAN.G219.29 Capsicum annuum HOM05D000274 ORTHO05D002552 5.7e-07 57.8 69 40.6
RcHm_v2.0_Chr6g0260431 Rosa chinensis HOM05D000274 ORTHO05D002552 5.7e-07 57.8 65 41.5
Lsat_1_v5_gn_4_11460 Lactuca sativa HOM05D000274 ORTHO05D002552 9.7e-07 57.0 58 44.8
CAN.G702.46 Capsicum annuum HOM05D000743 ORTHO05D000580 1.3e-06 56.6 73 37.0
Glyma.20G048700 Glycine max HOM05D000274 ORTHO05D002552 1.7e-06 56.2 50 50.0
Lsat_1_v5_gn_4_118880 Lactuca sativa HOM05D000274 ORTHO05D002552 1.7e-06 56.2 73 37.0
EL10Ac1g01196 Beta vulgaris HOM05D000274 ORTHO05D002552 2.2e-06 55.8 70 42.9
Gohir.D01G169088 Gossypium hirsutum HOM05D000274 ORTHO05D002552 2.2e-06 55.8 70 40.0
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 2.2e-06 55.8 58 43.1
Gorai.010G129800 Gossypium raimondii HOM05D000274 ORTHO05D002552 2.8e-06 55.5 57 47.4
Medtr4g034690 Medicago truncatula HOM05D000274 ORTHO05D002552 2.8e-06 55.5 70 35.7
Hund27967 Selenicereus undatus HOM05D000274 ORTHO05D002552 2.8e-06 55.5 75 40.0
Hund27992 Selenicereus undatus HOM05D000274 ORTHO05D002552 2.8e-06 55.5 61 41.0
EL10As15g24108 Beta vulgaris HOM05D000274 ORTHO05D002552 3.7e-06 55.1 58 44.8
Psat0s1446g0160 Pisum sativum HOM05D000274 ORTHO05D002552 3.7e-06 55.1 70 38.6
Psat0s7142g0080 Pisum sativum HOM05D000274 ORTHO05D002552 3.7e-06 55.1 70 38.6
Gohir.A10G134850 Gossypium hirsutum HOM05D000274 ORTHO05D002552 6.3e-06 54.3 70 38.6
Gohir.D07G185750 Gossypium hirsutum HOM05D000274 ORTHO05D002552 6.3e-06 54.3 66 39.4


User provided reference genes

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