Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020281 Vanilla planifolia HOM05D007001 ORTHO05D005587 0.0e+00 1243.8 618 100.0
HPP92_021324 Vanilla planifolia HOM05D007001 ORTHO05D005587 5.1e-58 229.9 526 33.7
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 1.4e-10 72.4 149 30.9
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 4.0e-10 70.9 76 44.7
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 1.2e-09 69.3 93 41.9
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 4.4e-09 67.4 73 39.7
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 4.4e-09 67.4 71 43.7
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 4.4e-09 67.4 72 38.9
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 7.5e-09 66.6 79 38.0
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 9.8e-09 66.2 329 25.5
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 9.8e-09 66.2 155 28.4
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.3e-08 65.9 73 43.8
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 1.7e-08 65.5 76 43.4
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 2.2e-08 65.1 83 34.9
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 2.2e-08 65.1 73 42.5
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 3.7e-08 64.3 73 39.7
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 6.4e-08 63.5 196 23.5
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 8.3e-08 63.2 72 40.3
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 1.1e-07 62.8 73 39.7
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 1.1e-07 62.8 77 40.3
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 1.4e-07 62.4 73 39.7
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 1.4e-07 62.4 73 39.7
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 1.9e-07 62.0 72 38.9
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 2.4e-07 61.6 82 36.6
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 3.2e-07 61.2 91 35.2
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 3.2e-07 61.2 247 24.7
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 3.2e-07 61.2 71 35.2
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 4.1e-07 60.8 72 34.7
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 4.1e-07 60.8 79 36.7
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 4.1e-07 60.8 71 39.4
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 5.4e-07 60.5 71 38.0
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 5.4e-07 60.5 138 29.7
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 7.0e-07 60.1 72 38.9
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 7.0e-07 60.1 83 37.3
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 9.2e-07 59.7 69 37.7
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 9.2e-07 59.7 110 33.6
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 9.2e-07 59.7 77 36.4
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 1.6e-06 58.9 70 41.4
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 1.6e-06 58.9 70 41.4
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 1.6e-06 58.9 73 42.5
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 2.0e-06 58.5 144 31.2
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 2.0e-06 58.5 144 31.2
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 2.0e-06 58.5 144 31.2
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 2.0e-06 58.5 73 41.1
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.0e-06 58.5 72 38.9
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 3.5e-06 57.8 144 28.5
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 3.5e-06 57.8 129 26.4
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 4.6e-06 57.4 141 31.9
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 4.6e-06 57.4 141 31.9
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 4.6e-06 57.4 236 24.6
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 4.6e-06 57.4 70 38.6
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 6.0e-06 57.0 79 36.7
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 6.0e-06 57.0 82 32.9
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 7.8e-06 56.6 142 27.5
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 7.8e-06 56.6 72 36.1
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 7.8e-06 56.6 71 38.0


User provided reference genes

Program Settings