Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 0.0e+00 1312.7 682 100.0
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 3.1e-197 692.6 634 56.3
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 3.1e-197 692.6 655 53.7
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 3.8e-195 685.6 546 60.6
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.1e-190 669.8 588 57.0
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 1.3e-187 660.6 691 52.0
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.2e-185 654.1 653 52.7
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 1.8e-184 650.2 691 50.1
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 1.9e-183 646.7 546 56.2
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 3.1e-181 639.4 596 55.2
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.5e-180 637.1 603 54.6
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 2.0e-180 636.7 571 56.4
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 2.6e-180 636.3 651 51.6
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 7.6e-180 634.8 688 49.7
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 3.8e-179 632.5 587 53.7
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 3.8e-179 632.5 651 51.2
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 4.2e-178 629.0 657 53.0
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 2.5e-175 619.8 589 53.8
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 4.8e-174 615.5 584 53.9
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 4.8e-174 615.5 577 52.7
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 4.1e-173 612.5 581 52.8
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.2e-172 610.9 510 59.0
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 2.0e-172 610.1 682 48.5
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 3.4e-172 609.4 598 52.8
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 2.9e-171 606.3 546 53.7
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 1.9e-170 603.6 666 49.1
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 2.7e-169 599.7 589 50.4
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 2.3e-168 596.7 658 49.1
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 6.7e-168 595.1 552 54.0
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 6.7e-168 595.1 633 49.6
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 8.8e-168 594.7 599 50.4
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 1.1e-167 594.3 654 50.2
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 3.7e-166 589.3 613 51.9
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 1.8e-165 587.0 673 49.0
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 4.1e-165 585.9 653 48.2
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 1.2e-164 584.3 511 55.8
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 4.2e-162 575.9 658 48.8
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 6.1e-161 572.0 621 49.0
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 6.1e-161 572.0 659 48.7
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 1.4e-160 570.9 660 47.3
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 1.3e-158 564.3 582 51.7
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 2.8e-158 563.1 547 50.8
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.0e-155 552.4 629 48.5
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 8.5e-155 551.6 609 47.8
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 1.5e-154 550.8 546 52.4
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 3.0e-152 543.1 659 47.0
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 5.2e-152 542.3 637 46.0
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 4.1e-149 532.7 447 57.0
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 7.0e-149 531.9 549 49.2
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 9.1e-149 531.6 477 54.3
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 5.9e-148 528.9 480 52.7
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 3.6e-145 519.6 520 51.0
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 6.1e-145 518.8 692 43.2
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 5.2e-144 515.8 557 49.9
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 2.0e-143 513.8 451 55.2
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.3e-142 511.1 492 52.6
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 1.3e-142 511.1 598 48.3
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 2.8e-142 510.0 550 46.0
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 8.3e-142 508.4 654 44.0
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 1.1e-141 508.1 550 45.8
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 2.4e-141 506.9 588 45.1
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 2.9e-139 500.0 492 52.0
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 5.0e-139 499.2 418 57.4
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 3.6e-137 493.0 687 42.1
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 6.1e-137 492.3 606 43.4
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 8.0e-137 491.9 548 44.5
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 5.2e-136 489.2 549 44.1
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 4.4e-135 486.1 417 56.6
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.8e-133 480.7 369 60.4
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 4.1e-133 479.6 582 42.8
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 4.1e-133 479.6 582 42.8
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 2.7e-132 476.9 607 42.5
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 5.9e-132 475.7 496 49.6
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.7e-131 474.2 490 48.8
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 2.3e-131 473.8 472 49.8
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 4.2e-130 469.5 426 54.0
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 5.5e-130 469.2 542 43.9
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.5e-130 469.2 683 42.0
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 1.6e-129 467.6 679 42.6
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 1.0e-128 464.9 621 41.4
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 3.4e-127 459.9 576 41.8
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 4.5e-124 449.5 487 46.8
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 7.8e-124 448.7 413 53.0
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.3e-123 448.0 651 39.9
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 1.7e-123 447.6 539 46.9
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 8.6e-123 445.3 478 46.7
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 3.6e-121 439.9 412 52.2
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 1.8e-112 411.0 499 43.3
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 8.3e-110 402.1 496 44.6
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 2.0e-103 380.9 411 49.6
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 9.9e-103 378.6 345 54.8
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 1.8e-96 357.8 332 52.4
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 2.4e-96 357.5 364 50.8
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 1.6e-89 334.7 324 50.0
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 6.2e-89 332.8 286 53.5
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 1.3e-86 325.1 556 37.6
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 1.7e-86 324.7 577 36.2
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 1.7e-86 324.7 521 37.0
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 2.5e-82 310.8 248 56.9
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 5.8e-71 273.1 236 54.2
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 7.1e-69 266.2 385 44.4
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 7.4e-58 229.6 280 47.5
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 2.0e-47 194.9 178 56.2
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 1.6e-39 168.7 166 54.8
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 2.2e-38 164.9 148 58.1
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.5e-37 162.2 161 56.5
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 6.1e-36 156.8 165 50.3
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 6.1e-36 156.8 142 60.6
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 7.0e-32 143.3 253 31.6
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 4.0e-27 127.5 256 31.2
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 1.7e-14 85.5 154 39.0
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 4.3e-13 80.9 80 51.2
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.5e-13 79.7 59 57.6
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 1.7e-09 68.9 68 52.9
Lalb_Chr10g0092301 Lupinus albus HOM05D002617 ORTHO05D009035 2.9e-09 68.2 54 51.9


User provided reference genes

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